FFCP PHASE1:Mm9::chr18:36838881..36838904,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=225372|HGNC=|MCL_coexpression_id=1|UniProt=Q8R1C9,Q3UR23|association_with_transcript=115bp_to_ENSMUST00000001415,NM_146085,uc008enz.1_5end|description=CAGE_peak_7_at_Apbb3_5end|id=chr18:36838881..36838904,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002614,1.69e-08,3;CL:0002610,3.86e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!2.19e-12!50;UBERON:0006238!2.19e-12!50;UBERON:0001049!5.41e-12!52;UBERON:0005068!5.41e-12!52;UBERON:0006241!5.41e-12!52;UBERON:0007135!5.41e-12!52;UBERON:0000033!5.80e-12!63;UBERON:0002346!5.96e-12!71;UBERON:0003075!5.96e-12!71;UBERON:0007284!5.96e-12!71;UBERON:0002616!7.12e-12!49;UBERON:0001017!8.78e-11!73;UBERON:0005743!8.78e-11!73;UBERON:0000073!1.10e-10!75;UBERON:0001016!1.10e-10!75;UBERON:0004121!6.01e-10!102;UBERON:0000924!6.01e-10!102;UBERON:0006601!6.01e-10!102;UBERON:0007811!9.12e-10!86;UBERON:0003056!7.76e-09!49;UBERON:0002020!1.34e-08!34;UBERON:0000153!2.31e-08!94;UBERON:0003080!5.33e-08!40;UBERON:0002021!6.86e-08!10;UBERON:0000411!6.86e-08!10;UBERON:0001950!6.86e-08!10;UBERON:0002780!2.00e-07!39;UBERON:0001890!2.00e-07!39;UBERON:0006240!2.00e-07!39;UBERON:0002791!2.56e-07!29;UBERON:0003528!2.56e-07!29;UBERON:0001893!2.56e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.94e-29,54;UBERON:0001049,3.51e-25,52;UBERON:0005068,3.51e-25,52;UBERON:0006241,3.51e-25,52;UBERON:0007135,3.51e-25,52;UBERON:0000955,7.69e-24,47;UBERON:0006238,7.69e-24,47;UBERON:0001017,6.59e-23,73;UBERON:0002616,1.95e-22,46;UBERON:0001016,4.13e-22,75;UBERON:0002346,6.73e-21,64;UBERON:0003075,6.73e-21,64;UBERON:0007284,6.73e-21,64;UBERON:0002020,2.33e-18,34;UBERON:0002021,1.09e-17,10;UBERON:0000411,1.09e-17,10;UBERON:0001950,1.09e-17,10;UBERON:0010371,1.57e-17,73;UBERON:0003528,1.77e-17,29;UBERON:0002791,1.77e-17,29;UBERON:0001893,1.77e-17,29;UBERON:0003080,1.93e-17,40;UBERON:0004121,3.03e-17,95;UBERON:0000924,3.03e-17,95;UBERON:0006601,3.03e-17,95;UBERON:0002780,8.06e-16,39;UBERON:0001890,8.06e-16,39;UBERON:0006240,8.06e-16,39;UBERON:0003056,7.24e-15,49;UBERON:0010314,1.37e-12,92;UBERON:0002619,6.32e-12,17;UBERON:0000956,1.86e-11,21;UBERON:0001869,1.86e-11,21;UBERON:0000203,1.86e-11,21;UBERON:0002950,7.44e-11,4;UBERON:0001891,7.44e-11,4;UBERON:0009616,7.44e-11,4;UBERON:0010286,7.44e-11,4;UBERON:0000025,5.75e-09,114;UBERON:0004111,8.45e-09,122;UBERON:0002038,1.69e-08,3;UBERON:0009663,1.69e-08,3;UBERON:0009661,1.69e-08,3;UBERON:0000125,1.69e-08,3;UBERON:0002308,1.69e-08,3;UBERON:0003076,2.07e-08,12;UBERON:0003057,2.07e-08,12;UBERON:0004684,3.86e-08,3;UBERON:0002275,3.86e-08,3;UBERON:0007023,5.52e-08,51;UBERON:0002420,2.09e-07,8;UBERON:0007245,2.09e-07,8;UBERON:0010009,2.09e-07,8;UBERON:0010011,2.09e-07,8;UBERON:0000454,2.09e-07,8|phase1_expression=0.480446541314382,0,0,1.20985684522732,1.50268718983904,0.839396359559449,0,0,0.422366166455,0.70219357896598,0.171217968225505,0.478632953972018,0.513602189793617,0,0,0,0,0.157731082679119,0.274228867211478,0.42438965179803,0.765389611359628,0.297872853602656,0,0,0.22940928106717,0.57423196411502,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0.768436610643109,0,0.135005938331691,0,2.85650984403804,1.32521124570968,0.122490799214954,0,0,2.20231761998777,5.2351808614927,5.83704826373725,0.131886287730194,0.457438218012048,0,4.4669279840221,5.6276261003168,4.73674568108111,0,0.996601765593721,0.559198337475902,0.151452386666368,0.0755715601067855,0,0,0,0,1.29955283489534,0,0,0.340860645156116,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,0,0,0.230615497256059,0.150722640552623,0.470354828542819,0.125666591329675,0,0,0,0.323533699894818,0.220841518460394,0,0,2.34224637609238,3.97948742945565,0,0.11981512450592,0,0.127070227073065,5.54225365797844,3.66000482254901,1.13088916901578,5.04090528557602,4.09144731728529,4.36354893575076,4.54275536589721,0.407357455401265,0,0.758168275301024,1.05220927943237,0,0.229902104433473,0.180062129805349,0.150704817835715,0.340182495756639,0.12811372028485,0.281105173679186,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.700592054203017,0.822799249567402,0.32833492815819,0.486412857275134,0.584799949701329,0,0.671032093801859,2.3131894342054,0.411618449517138,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.252946148497029,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0.189491411770485,0.325929952884052,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0,0.478364305972461,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,4.0137647496948,2.46144541843627,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0.395287777946524,1.28528526568723,0.567760340833074,0,0.325773918707152,0,1.32745138339963,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0.441056796109924,0.49465875882444,0,0.0603129249281559,0.358117032009409,0,0.874442509889552,3.15223013417866,0.170870880797853,0,0,0,0.136694227721025,0,0.339956859987711,0.279902904647316,0.414599921413271,0,0.316335993581135,0.406638934253697,0.108005340821801,0,0,0,0.247960367176008,0,0.259229946583586,0,1.69107881605257,0.149516546043979,0,0,0,0.168956125490778,0.352071715937262,0.13020438484395,0.524296722128554,3.14059357073808,3.45636007509439,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.240390899039938,0.443068581523732,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0.221985953374065,0.179427713218951,0.335769232728157,0.386379188064381,0.187682475451182,0,0,1.50471631210609,1.6942555278512,2.30162618253588,4.01026859407578,3.60891682921744,3.42541259885321,0.755393897389701,2.02506750069542,6.30449684513909,3.17199686288943,4.65984280576638,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0,0,0,0.233931608445408,0,0.191288332068843,0.441182838239031,0|short_description=p7@Apbb3}} | ||
|EntrezGene=225372 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8R1C9,Q3UR23 | |||
|association_with_transcript=115bp_to_ENSMUST00000001415,NM_146085,uc008enz.1_5end | |||
|description=CAGE_peak_7_at_Apbb3_5end | |||
|id=chr18:36838881..36838904,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.69e-08,3;CL:0002610,3.86e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!2.19e-12!50;UBERON:0006238!2.19e-12!50;UBERON:0001049!5.41e-12!52;UBERON:0005068!5.41e-12!52;UBERON:0006241!5.41e-12!52;UBERON:0007135!5.41e-12!52;UBERON:0000033!5.80e-12!63;UBERON:0002346!5.96e-12!71;UBERON:0003075!5.96e-12!71;UBERON:0007284!5.96e-12!71;UBERON:0002616!7.12e-12!49;UBERON:0001017!8.78e-11!73;UBERON:0005743!8.78e-11!73;UBERON:0000073!1.10e-10!75;UBERON:0001016!1.10e-10!75;UBERON:0004121!6.01e-10!102;UBERON:0000924!6.01e-10!102;UBERON:0006601!6.01e-10!102;UBERON:0007811!9.12e-10!86;UBERON:0003056!7.76e-09!49;UBERON:0002020!1.34e-08!34;UBERON:0000153!2.31e-08!94;UBERON:0003080!5.33e-08!40;UBERON:0002021!6.86e-08!10;UBERON:0000411!6.86e-08!10;UBERON:0001950!6.86e-08!10;UBERON:0002780!2.00e-07!39;UBERON:0001890!2.00e-07!39;UBERON:0006240!2.00e-07!39;UBERON:0002791!2.56e-07!29;UBERON:0003528!2.56e-07!29;UBERON:0001893!2.56e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.94e-29,54;UBERON:0001049,3.51e-25,52;UBERON:0005068,3.51e-25,52;UBERON:0006241,3.51e-25,52;UBERON:0007135,3.51e-25,52;UBERON:0000955,7.69e-24,47;UBERON:0006238,7.69e-24,47;UBERON:0001017,6.59e-23,73;UBERON:0002616,1.95e-22,46;UBERON:0001016,4.13e-22,75;UBERON:0002346,6.73e-21,64;UBERON:0003075,6.73e-21,64;UBERON:0007284,6.73e-21,64;UBERON:0002020,2.33e-18,34;UBERON:0002021,1.09e-17,10;UBERON:0000411,1.09e-17,10;UBERON:0001950,1.09e-17,10;UBERON:0010371,1.57e-17,73;UBERON:0003528,1.77e-17,29;UBERON:0002791,1.77e-17,29;UBERON:0001893,1.77e-17,29;UBERON:0003080,1.93e-17,40;UBERON:0004121,3.03e-17,95;UBERON:0000924,3.03e-17,95;UBERON:0006601,3.03e-17,95;UBERON:0002780,8.06e-16,39;UBERON:0001890,8.06e-16,39;UBERON:0006240,8.06e-16,39;UBERON:0003056,7.24e-15,49;UBERON:0010314,1.37e-12,92;UBERON:0002619,6.32e-12,17;UBERON:0000956,1.86e-11,21;UBERON:0001869,1.86e-11,21;UBERON:0000203,1.86e-11,21;UBERON:0002950,7.44e-11,4;UBERON:0001891,7.44e-11,4;UBERON:0009616,7.44e-11,4;UBERON:0010286,7.44e-11,4;UBERON:0000025,5.75e-09,114;UBERON:0004111,8.45e-09,122;UBERON:0002038,1.69e-08,3;UBERON:0009663,1.69e-08,3;UBERON:0009661,1.69e-08,3;UBERON:0000125,1.69e-08,3;UBERON:0002308,1.69e-08,3;UBERON:0003076,2.07e-08,12;UBERON:0003057,2.07e-08,12;UBERON:0004684,3.86e-08,3;UBERON:0002275,3.86e-08,3;UBERON:0007023,5.52e-08,51;UBERON:0002420,2.09e-07,8;UBERON:0007245,2.09e-07,8;UBERON:0010009,2.09e-07,8;UBERON:0010011,2.09e-07,8;UBERON:0000454,2.09e-07,8 | |||
|phase1_expression=0.480446541314382,0,0,1.20985684522732,1.50268718983904,0.839396359559449,0,0,0.422366166455,0.70219357896598,0.171217968225505,0.478632953972018,0.513602189793617,0,0,0,0,0.157731082679119,0.274228867211478,0.42438965179803,0.765389611359628,0.297872853602656,0,0,0.22940928106717,0.57423196411502,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0.768436610643109,0,0.135005938331691,0,2.85650984403804,1.32521124570968,0.122490799214954,0,0,2.20231761998777,5.2351808614927,5.83704826373725,0.131886287730194,0.457438218012048,0,4.4669279840221,5.6276261003168,4.73674568108111,0,0.996601765593721,0.559198337475902,0.151452386666368,0.0755715601067855,0,0,0,0,1.29955283489534,0,0,0.340860645156116,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.742210695324124,0,0,0.230615497256059,0.150722640552623,0.470354828542819,0.125666591329675,0,0,0,0.323533699894818,0.220841518460394,0,0,2.34224637609238,3.97948742945565,0,0.11981512450592,0,0.127070227073065,5.54225365797844,3.66000482254901,1.13088916901578,5.04090528557602,4.09144731728529,4.36354893575076,4.54275536589721,0.407357455401265,0,0.758168275301024,1.05220927943237,0,0.229902104433473,0.180062129805349,0.150704817835715,0.340182495756639,0.12811372028485,0.281105173679186,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.700592054203017,0.822799249567402,0.32833492815819,0.486412857275134,0.584799949701329,0,0.671032093801859,2.3131894342054,0.411618449517138,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.252946148497029,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0.189491411770485,0.325929952884052,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0,0.478364305972461,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,4.0137647496948,2.46144541843627,0,0.252470927204373,0,0.390438744296638,0,0,0,0,0.404810701674894,0,0.395287777946524,1.28528526568723,0.567760340833074,0,0.325773918707152,0,1.32745138339963,0,0.302323556964751,0.188605079755898,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0.21183207086382,0.441056796109924,0.49465875882444,0,0.0603129249281559,0.358117032009409,0,0.874442509889552,3.15223013417866,0.170870880797853,0,0,0,0.136694227721025,0,0.339956859987711,0.279902904647316,0.414599921413271,0,0.316335993581135,0.406638934253697,0.108005340821801,0,0,0,0.247960367176008,0,0.259229946583586,0,1.69107881605257,0.149516546043979,0,0,0,0.168956125490778,0.352071715937262,0.13020438484395,0.524296722128554,3.14059357073808,3.45636007509439,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.240390899039938,0.443068581523732,0.201932899896295,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0.221985953374065,0.179427713218951,0.335769232728157,0.386379188064381,0.187682475451182,0,0,1.50471631210609,1.6942555278512,2.30162618253588,4.01026859407578,3.60891682921744,3.42541259885321,0.755393897389701,2.02506750069542,6.30449684513909,3.17199686288943,4.65984280576638,0,0,0,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0,0,0,0.233931608445408,0,0.191288332068843,0.441182838239031,0 | |||
|short_description=p7@Apbb3 | |||
}} |
Revision as of 16:04, 13 September 2013
Short description: | p7@Apbb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Apbb3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 115bp_to_ENSMUST00000001415, NM_146085, uc008enz.1_5end |
EntrezGene: | Apbb3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.69e-08 | 3 |
raphe nuclei neuron | 3.86e-08 | 3 |
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.