FFCP PHASE1:Mm9::chr18:38157182..38157194,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=106952|HGNC=|MCL_coexpression_id=94|UniProt=E9Q0K7,Q8BWA0|association_with_transcript=14bp_to_ENSMUST00000164724,uc008ers.1_5end|description=CAGE_peak_3_at_Arap3_5end|id=chr18:38157182..38157194,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!7.50e-11!14;UBERON:0000117!7.50e-11!14;UBERON:0000171!7.50e-11!14;UBERON:0000170!7.50e-11!14;UBERON:0005597!7.50e-11!14;UBERON:0000118!7.50e-11!14;UBERON:0000468!3.34e-08!333;UBERON:0005153!3.40e-08!17;UBERON:0005177!8.42e-08!85;UBERON:0005178!1.76e-07!17;UBERON:0005181!1.76e-07!17;UBERON:0002224!1.76e-07!17;UBERON:0000915!1.76e-07!17;UBERON:0008947!1.76e-07!17;UBERON:0003258!1.76e-07!17;UBERON:0005157!2.39e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.88e-24,14;UBERON:0000117,2.88e-24,14;UBERON:0000171,2.88e-24,14;UBERON:0000170,2.88e-24,14;UBERON:0005597,2.88e-24,14;UBERON:0000118,2.88e-24,14;UBERON:0005153,2.31e-19,17;UBERON:0005178,2.31e-19,17;UBERON:0005181,2.31e-19,17;UBERON:0002224,2.31e-19,17;UBERON:0000915,2.31e-19,17;UBERON:0008947,2.31e-19,17;UBERON:0003258,2.31e-19,17;UBERON:0005157,6.19e-16,20;UBERON:0004872,4.42e-11,33;UBERON:0004535,1.91e-09,23;UBERON:0001009,1.91e-09,23;UBERON:0005177,7.77e-09,79;UBERON:0007100,9.60e-09,18;UBERON:0000948,9.60e-09,18;UBERON:0005498,9.60e-09,18;UBERON:0004140,9.60e-09,18;UBERON:0009881,9.60e-09,18;UBERON:0004141,9.60e-09,18;UBERON:0003084,9.60e-09,18;UBERON:0007005,9.60e-09,18;UBERON:0004139,9.60e-09,18;UBERON:0004291,9.60e-09,18;UBERON:0000310,1.33e-08,6;UBERON:0001443,1.33e-08,6;UBERON:0009569,1.24e-07,66;UBERON:0002100,4.77e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0.675029691658453,0.210324961351382,0.571301968807607,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0,0,0.263772575460388,0.365950574409639,0,0.279182999001381,0,0,0.294628585473668,0,0,0,0,4.63783181922684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0.148442139064825,1.04091196059682,0.913396434936424,0.691846491768175,0.301445281105245,0.352766121407114,0.502666365318702,0.494389935468748,1.01219549843938,0.884610551949874,1.13236794963186,0.441683036920787,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.497627882440372,0.252722758433675,0,0.520481771850815,0.689706313300419,0.720248519221397,0.30140963567143,0.204109497453984,0.12811372028485,0.281105173679186,0.517406741478031,0.862271971731369,0.189106080167819,0.351902248327898,0.657587197282725,0.834141747676794,1.0447564995665,0.205782136407943,0.59710280045548,0,0,0,0.621377317606506,0.938104239924385,1.08037236876609,0.946978942340841,2.55793501271625,1.07986979021165,2.79040733700489,2.14618721119695,0.934122738937356,1.48103864922132,0.32833492815819,1.05389452409612,1.02339991197733,2.41505126820156,2.01309628140558,0,0.411618449517138,0,0.264450566663544,0.853153002140936,0.928946687441754,0.515469845288373,1.21010114774006,0.889512175379481,0.570676878337677,0,0.329397909448022,0,0.795825888164603,0.58489226135736,0,0,0,0.569003702859245,0.799739588268102,2.25415471346161,1.01825663922657,1.16371492300575,0.98190147846446,0.632365371242573,0.295220295959204,0.31399745568275,0.246794327843601,0,0.667380422864376,0,0.224862112384854,0.202860121388503,0.482354319504834,0,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,0.624075346229121,0.505157755894224,0.358794827043824,0,3.32555742299888,0.757965647081939,1.62964976442026,1.86719594352707,1.87752198630802,2.51259386162724,2.61848004974615,3.12213836572478,4.72905432318573,4.65075848262427,3.50800491046472,4.7520361267564,5.00786447411097,3.03763023021174,0,0,0,0.275936746304732,0.160550589987792,0.117211686592203,0,1.76729649043061,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.712262414669021,0,0.494910368917606,1.32745138339963,0.971122544619926,0.604647113929502,0.943025398779491,0.885905678642318,1.53717573971964,1.03371317267288,0.363533729477506,0.712994756769443,0,1.05418608574999,0,0,0.720244376125241,0.517434735131018,0.857348140126369,0.532020700926821,0.891844088010353,0.658196082408484,0.608929898229199,3.05073220482823,1.27099242518292,0,0.32977250588296,0.161464426695906,0.422190474497091,0.477489376012546,0.164140899745061,0.874442509889552,0.18542530201051,0.170870880797853,1.23832120777933,1.11116716421827,0.376736914009382,0,0.228778173206523,0,0,0,0,0.474503990371703,1.42323626988794,0.648032044930808,0.418176592028937,0.436725127492355,0.269728692769641,0.495920734352016,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0,0.387479470433193,0.168956125490778,0.469428954583016,0.13020438484395,0,0,0,0,0.405450430580328,0.308132871494482,0.389762468933385,0.358053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| ||
|EntrezGene=106952 | |||
|HGNC= | |||
|MCL_coexpression_id=94 | |||
|UniProt=E9Q0K7,Q8BWA0 | |||
|association_with_transcript=14bp_to_ENSMUST00000164724,uc008ers.1_5end | |||
|description=CAGE_peak_3_at_Arap3_5end | |||
|id=chr18:38157182..38157194,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!7.50e-11!14;UBERON:0000117!7.50e-11!14;UBERON:0000171!7.50e-11!14;UBERON:0000170!7.50e-11!14;UBERON:0005597!7.50e-11!14;UBERON:0000118!7.50e-11!14;UBERON:0000468!3.34e-08!333;UBERON:0005153!3.40e-08!17;UBERON:0005177!8.42e-08!85;UBERON:0005178!1.76e-07!17;UBERON:0005181!1.76e-07!17;UBERON:0002224!1.76e-07!17;UBERON:0000915!1.76e-07!17;UBERON:0008947!1.76e-07!17;UBERON:0003258!1.76e-07!17;UBERON:0005157!2.39e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.88e-24,14;UBERON:0000117,2.88e-24,14;UBERON:0000171,2.88e-24,14;UBERON:0000170,2.88e-24,14;UBERON:0005597,2.88e-24,14;UBERON:0000118,2.88e-24,14;UBERON:0005153,2.31e-19,17;UBERON:0005178,2.31e-19,17;UBERON:0005181,2.31e-19,17;UBERON:0002224,2.31e-19,17;UBERON:0000915,2.31e-19,17;UBERON:0008947,2.31e-19,17;UBERON:0003258,2.31e-19,17;UBERON:0005157,6.19e-16,20;UBERON:0004872,4.42e-11,33;UBERON:0004535,1.91e-09,23;UBERON:0001009,1.91e-09,23;UBERON:0005177,7.77e-09,79;UBERON:0007100,9.60e-09,18;UBERON:0000948,9.60e-09,18;UBERON:0005498,9.60e-09,18;UBERON:0004140,9.60e-09,18;UBERON:0009881,9.60e-09,18;UBERON:0004141,9.60e-09,18;UBERON:0003084,9.60e-09,18;UBERON:0007005,9.60e-09,18;UBERON:0004139,9.60e-09,18;UBERON:0004291,9.60e-09,18;UBERON:0000310,1.33e-08,6;UBERON:0001443,1.33e-08,6;UBERON:0009569,1.24e-07,66;UBERON:0002100,4.77e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0.675029691658453,0.210324961351382,0.571301968807607,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0,0,0.263772575460388,0.365950574409639,0,0.279182999001381,0,0,0.294628585473668,0,0,0,0,4.63783181922684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0.148442139064825,1.04091196059682,0.913396434936424,0.691846491768175,0.301445281105245,0.352766121407114,0.502666365318702,0.494389935468748,1.01219549843938,0.884610551949874,1.13236794963186,0.441683036920787,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.497627882440372,0.252722758433675,0,0.520481771850815,0.689706313300419,0.720248519221397,0.30140963567143,0.204109497453984,0.12811372028485,0.281105173679186,0.517406741478031,0.862271971731369,0.189106080167819,0.351902248327898,0.657587197282725,0.834141747676794,1.0447564995665,0.205782136407943,0.59710280045548,0,0,0,0.621377317606506,0.938104239924385,1.08037236876609,0.946978942340841,2.55793501271625,1.07986979021165,2.79040733700489,2.14618721119695,0.934122738937356,1.48103864922132,0.32833492815819,1.05389452409612,1.02339991197733,2.41505126820156,2.01309628140558,0,0.411618449517138,0,0.264450566663544,0.853153002140936,0.928946687441754,0.515469845288373,1.21010114774006,0.889512175379481,0.570676878337677,0,0.329397909448022,0,0.795825888164603,0.58489226135736,0,0,0,0.569003702859245,0.799739588268102,2.25415471346161,1.01825663922657,1.16371492300575,0.98190147846446,0.632365371242573,0.295220295959204,0.31399745568275,0.246794327843601,0,0.667380422864376,0,0.224862112384854,0.202860121388503,0.482354319504834,0,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,0.624075346229121,0.505157755894224,0.358794827043824,0,3.32555742299888,0.757965647081939,1.62964976442026,1.86719594352707,1.87752198630802,2.51259386162724,2.61848004974615,3.12213836572478,4.72905432318573,4.65075848262427,3.50800491046472,4.7520361267564,5.00786447411097,3.03763023021174,0,0,0,0.275936746304732,0.160550589987792,0.117211686592203,0,1.76729649043061,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0.283880170416537,0.712262414669021,0,0.494910368917606,1.32745138339963,0.971122544619926,0.604647113929502,0.943025398779491,0.885905678642318,1.53717573971964,1.03371317267288,0.363533729477506,0.712994756769443,0,1.05418608574999,0,0,0.720244376125241,0.517434735131018,0.857348140126369,0.532020700926821,0.891844088010353,0.658196082408484,0.608929898229199,3.05073220482823,1.27099242518292,0,0.32977250588296,0.161464426695906,0.422190474497091,0.477489376012546,0.164140899745061,0.874442509889552,0.18542530201051,0.170870880797853,1.23832120777933,1.11116716421827,0.376736914009382,0,0.228778173206523,0,0,0,0,0.474503990371703,1.42323626988794,0.648032044930808,0.418176592028937,0.436725127492355,0.269728692769641,0.495920734352016,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0,0.387479470433193,0.168956125490778,0.469428954583016,0.13020438484395,0,0,0,0,0.405450430580328,0.308132871494482,0.389762468933385,0.358053391334963,0,0.480781798079875,0.147689527174577,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,0,0.750729901804728,0.36630324853453,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.415149390336707,0,0.512200817262403,1.45864030240976,0.209613162627982,0,0.666740183404846,0.824140228955577,0.64183841918363,0.758091635291392,0.25347929989024,0.943131706930381,0.749132059759059,0.89635213366817,0.689225627467359,0.476293691283074,0.231768651889711,0.192909220463705,0.412085900803307,0.735994600671987,0.685738504770831,0.70990322463735,0,1.30811774969096,0.564656282491984,0.846146078916765,0.182927972872773,1.05227884575137,0.543216455383447,1.12228454331548,0.474540072496697,1.18205378850676,0.818462086339379,0.619747364743864,0.771626443924566,0.249810577937946,0.935726433781634,0.429742108096597,0.765153328275374,1.32354851471709,0.927471342481686 | |||
|short_description=p3@Arap3 | |||
}} |
Revision as of 16:08, 13 September 2013
Short description: | p3@Arap3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Arap3_5end |
Coexpression cluster: | MCL_coexpression_mm9:94 |
Association with transcript: | 14bp_to_ENSMUST00000164724, uc008ers.1_5end |
EntrezGene: | Arap3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 2.88e-24 | 14 |
respiratory tube | 2.88e-24 | 14 |
respiration organ | 2.88e-24 | 14 |
pair of lungs | 2.88e-24 | 14 |
lung primordium | 2.88e-24 | 14 |
lung bud | 2.88e-24 | 14 |
epithelial bud | 2.31e-19 | 17 |
thoracic cavity element | 2.31e-19 | 17 |
thoracic segment organ | 2.31e-19 | 17 |
thoracic cavity | 2.31e-19 | 17 |
thoracic segment of trunk | 2.31e-19 | 17 |
respiratory primordium | 2.31e-19 | 17 |
endoderm of foregut | 2.31e-19 | 17 |
epithelial fold | 6.19e-16 | 20 |
splanchnic layer of lateral plate mesoderm | 4.42e-11 | 33 |
cardiovascular system | 1.91e-09 | 23 |
circulatory system | 1.91e-09 | 23 |
trunk region element | 7.77e-09 | 79 |
primary circulatory organ | 9.60e-09 | 18 |
heart | 9.60e-09 | 18 |
primitive heart tube | 9.60e-09 | 18 |
primary heart field | 9.60e-09 | 18 |
anterior lateral plate mesoderm | 9.60e-09 | 18 |
heart tube | 9.60e-09 | 18 |
heart primordium | 9.60e-09 | 18 |
cardiac mesoderm | 9.60e-09 | 18 |
cardiogenic plate | 9.60e-09 | 18 |
heart rudiment | 9.60e-09 | 18 |
breast | 1.33e-08 | 6 |
chest | 1.33e-08 | 6 |
subdivision of trunk | 1.24e-07 | 66 |
trunk | 4.77e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.