FFCP PHASE1:Mm9::chr18:50211356..50211371,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=106869|HGNC=|MCL_coexpression_id=11|UniProt=D3Z205,D3Z0Q1|association_with_transcript=0bp_to_ENSMUST00000134348,ENSMUST00000153873,ENSMUST00000155403_5end|description=CAGE_peak_5_at_Tnfaip8_5end|id=chr18:50211356..50211371,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!2.47e-11!5;UBERON:0001003!2.47e-11!5;UBERON:0002097!2.47e-11!5;UBERON:0002199!2.47e-11!5;UBERON:0007029!2.47e-11!5;UBERON:0007376!2.47e-11!5;UBERON:0002416!2.47e-11!5;UBERON:0007383!2.47e-11!5;UBERON:0006554!2.06e-08!16;UBERON:0001008!7.89e-08!17;UBERON:0002113!1.01e-07!14;UBERON:0003918!1.01e-07!14;UBERON:0005095!1.01e-07!14;UBERON:0007687!1.01e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.88e-16,14;UBERON:0003918,3.88e-16,14;UBERON:0011143,3.88e-16,14;UBERON:0005095,3.88e-16,14;UBERON:0007687,3.88e-16,14;UBERON:0006554,1.39e-12,18;UBERON:0001008,6.32e-12,19;UBERON:0000489,8.46e-11,21;UBERON:0000029,1.03e-09,1;UBERON:0001097,1.03e-09,1;UBERON:0003968,1.03e-09,1;UBERON:0001467,1.03e-09,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.473193248037357,0.822686601634433,0.42438965179803,8.84450217571126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,4.90990682791958,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.775809948670503,3.50679099451593,26.5593455921881,108.641068912987,78.0283677371633,91.4372984660542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,1.31909002353184,0.161464426695906,0.361877549568935,0.835606408021955,0.492422699235184,0,0,0.512612642393558,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p5@Tnfaip8}} | ||
|EntrezGene=106869 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|UniProt=D3Z205,D3Z0Q1 | |||
|association_with_transcript=0bp_to_ENSMUST00000134348,ENSMUST00000153873,ENSMUST00000155403_5end | |||
|description=CAGE_peak_5_at_Tnfaip8_5end | |||
|id=chr18:50211356..50211371,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!2.47e-11!5;UBERON:0001003!2.47e-11!5;UBERON:0002097!2.47e-11!5;UBERON:0002199!2.47e-11!5;UBERON:0007029!2.47e-11!5;UBERON:0007376!2.47e-11!5;UBERON:0002416!2.47e-11!5;UBERON:0007383!2.47e-11!5;UBERON:0006554!2.06e-08!16;UBERON:0001008!7.89e-08!17;UBERON:0002113!1.01e-07!14;UBERON:0003918!1.01e-07!14;UBERON:0005095!1.01e-07!14;UBERON:0007687!1.01e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.88e-16,14;UBERON:0003918,3.88e-16,14;UBERON:0011143,3.88e-16,14;UBERON:0005095,3.88e-16,14;UBERON:0007687,3.88e-16,14;UBERON:0006554,1.39e-12,18;UBERON:0001008,6.32e-12,19;UBERON:0000489,8.46e-11,21;UBERON:0000029,1.03e-09,1;UBERON:0001097,1.03e-09,1;UBERON:0003968,1.03e-09,1;UBERON:0001467,1.03e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.473193248037357,0.822686601634433,0.42438965179803,8.84450217571126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,4.90990682791958,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.775809948670503,3.50679099451593,26.5593455921881,108.641068912987,78.0283677371633,91.4372984660542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0.220528398054962,1.31909002353184,0.161464426695906,0.361877549568935,0.835606408021955,0.492422699235184,0,0,0.512612642393558,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p5@Tnfaip8 | |||
}} |
Revision as of 16:18, 13 September 2013
Short description: | p5@Tnfaip8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tnfaip8_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_ENSMUST00000134348, ENSMUST00000153873, ENSMUST00000155403_5end |
EntrezGene: | Tnfaip8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 3.88e-16 | 14 |
kidney mesenchyme | 3.88e-16 | 14 |
upper urinary tract | 3.88e-16 | 14 |
kidney rudiment | 3.88e-16 | 14 |
kidney field | 3.88e-16 | 14 |
urinary system structure | 1.39e-12 | 18 |
renal system | 6.32e-12 | 19 |
cavitated compound organ | 8.46e-11 | 21 |
lymph node | 1.03e-09 | 1 |
axillary lymph node | 1.03e-09 | 1 |
peripheral lymph node | 1.03e-09 | 1 |
shoulder | 1.03e-09 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.