FFCP PHASE1:Hg19::chr6:138195701..138195715,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7128|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=11896|TSSclassifier=N|UniProt=Q5PY18|association_with_transcript=-281bp_to_AY820830_5end|coexpression_cluster_id=C2|description=CAGE_peak_20_at_TNFAIP3_5end|id=chr6:138195701..138195715,+|ontology_enrichment_celltype=CL:0002057!2.71e-50!42;CL:0000766!3.58e-49!76;CL:0000860!2.30e-46!45;CL:0000738!1.15e-40!140;CL:0002194!9.74e-40!63;CL:0000576!9.74e-40!63;CL:0000040!9.74e-40!63;CL:0000559!9.74e-40!63;CL:0002009!3.04e-38!65;CL:0000763!4.39e-35!112;CL:0000049!4.39e-35!112;CL:0000839!7.05e-35!70;CL:0000557!2.92e-34!71;CL:0000988!4.22e-34!182;CL:0000037!4.88e-32!172;CL:0000566!4.88e-32!172;CL:0002087!1.17e-31!119;CL:0002032!8.87e-31!165;CL:0000837!8.87e-31!165;CL:0002031!1.35e-26!124;CL:0000094!3.77e-17!8;CL:0000081!7.28e-16!11;CL:0000134!3.39e-14!358;CL:0002320!1.20e-13!365;CL:0000219!1.03e-11!390;CL:0000080!2.00e-11!6;CL:0000048!2.42e-11!430;CL:0000034!3.21e-11!444;CL:0000723!5.56e-11!436;CL:0000767!7.60e-09!3;CL:0000771!2.40e-07!2;CL:0002393!3.57e-07!9;CL:0002397!3.57e-07!9|ontology_enrichment_celltype_v019=CL:0000860;2.28e-62;33!CL:0002057;2.28e-62;33!CL:0000473;5.30e-48;39!CL:0000234;5.30e-48;39!CL:0000576;1.47e-28;48!CL:0000766;3.25e-26;69!CL:0000081;2.49e-18;11!CL:0000771;7.68e-18;2!CL:0000094;1.37e-16;8!CL:0000763;5.94e-15;100!CL:0000775;1.43e-11;3!CL:0002087;6.77e-11;104!CL:0000738;3.73e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,1.51e-58,42;CL:0002057,1.51e-58,42;CL:0000473,9.42e-57,48;CL:0000234,9.42e-57,48;CL:0000766,1.95e-54,72;CL:0002194,9.02e-45,59;CL:0000576,9.02e-45,59;CL:0000040,9.02e-45,59;CL:0000559,9.02e-45,59;CL:0002009,3.18e-43,61;CL:0000839,9.24e-40,66;CL:0000557,3.96e-39,67;CL:0000763,2.69e-35,108;CL:0000049,2.69e-35,108;CL:0000738,2.39e-27,136;CL:0002032,1.46e-22,161;CL:0000837,1.46e-22,161;CL:0000988,2.85e-22,177;CL:0002087,1.38e-21,115;CL:0000037,1.78e-21,168;CL:0002031,1.47e-20,120;CL:0000081,2.68e-18,11;CL:0000771,7.68e-18,2;CL:0000094,1.49e-16,8;CL:0000775,1.59e-11,3;CL:0000134,3.30e-08,354;CL:0002320,5.68e-08,361;CL:0000219,3.86e-07,386|ontology_enrichment_development_v019=CL:0002057;3.75e-43;42!CL:0000049;5.11e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.77e-31!102;UBERON:0003061!1.77e-31!102;UBERON:0002371!2.10e-29!80;UBERON:0002193!9.85e-28!112;UBERON:0001474!9.91e-27!86;UBERON:0004765!1.93e-21!101;UBERON:0001434!1.93e-21!101;UBERON:0002405!4.32e-19!115;UBERON:0003081!1.44e-13!216;UBERON:0002384!6.76e-13!375;UBERON:0002204!3.87e-12!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.52e-34,76;UBERON:0001474,1.79e-31,82;UBERON:0002390,7.14e-29,98;UBERON:0003061,7.14e-29,98;UBERON:0004765,2.02e-28,90;UBERON:0002405,2.07e-27,93;UBERON:0002193,6.51e-26,108;UBERON:0001434,2.78e-25,100;UBERON:0002204,7.23e-14,167;UBERON:0003081,3.17e-12,203;UBERON:0002384,1.19e-07,371|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.458480434487708,0.164201178899891,0.157421562627358,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0,0,0,1.10799081706375,0.401088894940283,0.217010870715852,0,0,0,0.145398238779565,0,0,1.39457422143411,1.6446715520873,0.929119112685311,1.1507695692886,2.30544635876191,2.60130452877444,12.7555901872549,10.973239620925,2.70852973188684,0.752969358170419,0,0.898893937780338,7.03992952453076,6.41858054152187,5.11469700639233,0,0,0,12.7692064996577,10.2129340444405,5.60540024096017,0.251248665256743,0.521482918420201,0.65156653411535,11.502590550034,22.0966581592539,12.9749578850763,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1780417436063,23.2668158488995,0,0,0,0.926864265692532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,2.24702107184155,0,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7128 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11896 | |||
|TSSclassifier=N | |||
|UniProt=Q5PY18 | |||
|association_with_transcript=-281bp_to_AY820830_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_20_at_TNFAIP3_5end | |||
|id=chr6:138195701..138195715,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.71e-50!42;CL:0000766!3.58e-49!76;CL:0000860!2.30e-46!45;CL:0000738!1.15e-40!140;CL:0002194!9.74e-40!63;CL:0000576!9.74e-40!63;CL:0000040!9.74e-40!63;CL:0000559!9.74e-40!63;CL:0002009!3.04e-38!65;CL:0000763!4.39e-35!112;CL:0000049!4.39e-35!112;CL:0000839!7.05e-35!70;CL:0000557!2.92e-34!71;CL:0000988!4.22e-34!182;CL:0000037!4.88e-32!172;CL:0000566!4.88e-32!172;CL:0002087!1.17e-31!119;CL:0002032!8.87e-31!165;CL:0000837!8.87e-31!165;CL:0002031!1.35e-26!124;CL:0000094!3.77e-17!8;CL:0000081!7.28e-16!11;CL:0000134!3.39e-14!358;CL:0002320!1.20e-13!365;CL:0000219!1.03e-11!390;CL:0000080!2.00e-11!6;CL:0000048!2.42e-11!430;CL:0000034!3.21e-11!444;CL:0000723!5.56e-11!436;CL:0000767!7.60e-09!3;CL:0000771!2.40e-07!2;CL:0002393!3.57e-07!9;CL:0002397!3.57e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.28e-62;33!CL:0002057;2.28e-62;33!CL:0000473;5.30e-48;39!CL:0000234;5.30e-48;39!CL:0000576;1.47e-28;48!CL:0000766;3.25e-26;69!CL:0000081;2.49e-18;11!CL:0000771;7.68e-18;2!CL:0000094;1.37e-16;8!CL:0000763;5.94e-15;100!CL:0000775;1.43e-11;3!CL:0002087;6.77e-11;104!CL:0000738;3.73e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.51e-58,42;CL:0002057,1.51e-58,42;CL:0000473,9.42e-57,48;CL:0000234,9.42e-57,48;CL:0000766,1.95e-54,72;CL:0002194,9.02e-45,59;CL:0000576,9.02e-45,59;CL:0000040,9.02e-45,59;CL:0000559,9.02e-45,59;CL:0002009,3.18e-43,61;CL:0000839,9.24e-40,66;CL:0000557,3.96e-39,67;CL:0000763,2.69e-35,108;CL:0000049,2.69e-35,108;CL:0000738,2.39e-27,136;CL:0002032,1.46e-22,161;CL:0000837,1.46e-22,161;CL:0000988,2.85e-22,177;CL:0002087,1.38e-21,115;CL:0000037,1.78e-21,168;CL:0002031,1.47e-20,120;CL:0000081,2.68e-18,11;CL:0000771,7.68e-18,2;CL:0000094,1.49e-16,8;CL:0000775,1.59e-11,3;CL:0000134,3.30e-08,354;CL:0002320,5.68e-08,361;CL:0000219,3.86e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.75e-43;42!CL:0000049;5.11e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.77e-31!102;UBERON:0003061!1.77e-31!102;UBERON:0002371!2.10e-29!80;UBERON:0002193!9.85e-28!112;UBERON:0001474!9.91e-27!86;UBERON:0004765!1.93e-21!101;UBERON:0001434!1.93e-21!101;UBERON:0002405!4.32e-19!115;UBERON:0003081!1.44e-13!216;UBERON:0002384!6.76e-13!375;UBERON:0002204!3.87e-12!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.52e-34,76;UBERON:0001474,1.79e-31,82;UBERON:0002390,7.14e-29,98;UBERON:0003061,7.14e-29,98;UBERON:0004765,2.02e-28,90;UBERON:0002405,2.07e-27,93;UBERON:0002193,6.51e-26,108;UBERON:0001434,2.78e-25,100;UBERON:0002204,7.23e-14,167;UBERON:0003081,3.17e-12,203;UBERON:0002384,1.19e-07,371 | |||
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|short_description=p20@TNFAIP3 | |||
}} |
Revision as of 18:18, 13 September 2013
Short description: | p20@TNFAIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_TNFAIP3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -281bp_to_AY820830_5end |
EntrezGene: | TNFAIP3 |
HGNC: | 11896 |
UniProt: | Q5PY18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.51e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.51e-58 | 42 |
defensive cell | 9.42e-57 | 48 |
phagocyte | 9.42e-57 | 48 |
myeloid leukocyte | 1.95e-54 | 72 |
monopoietic cell | 9.02e-45 | 59 |
monocyte | 9.02e-45 | 59 |
monoblast | 9.02e-45 | 59 |
promonocyte | 9.02e-45 | 59 |
macrophage dendritic cell progenitor | 3.18e-43 | 61 |
myeloid lineage restricted progenitor cell | 9.24e-40 | 66 |
granulocyte monocyte progenitor cell | 3.96e-39 | 67 |
myeloid cell | 2.69e-35 | 108 |
common myeloid progenitor | 2.69e-35 | 108 |
leukocyte | 2.39e-27 | 136 |
hematopoietic oligopotent progenitor cell | 1.46e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.46e-22 | 161 |
hematopoietic cell | 2.85e-22 | 177 |
nongranular leukocyte | 1.38e-21 | 115 |
hematopoietic stem cell | 1.78e-21 | 168 |
hematopoietic lineage restricted progenitor cell | 1.47e-20 | 120 |
blood cell | 2.68e-18 | 11 |
eosinophil | 7.68e-18 | 2 |
granulocyte | 1.49e-16 | 8 |
neutrophil | 1.59e-11 | 3 |
mesenchymal cell | 3.30e-08 | 354 |
connective tissue cell | 5.68e-08 | 361 |
motile cell | 3.86e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.52e-34 | 76 |
bone element | 1.79e-31 | 82 |
hematopoietic system | 7.14e-29 | 98 |
blood island | 7.14e-29 | 98 |
skeletal element | 2.02e-28 | 90 |
immune system | 2.07e-27 | 93 |
hemolymphoid system | 6.51e-26 | 108 |
skeletal system | 2.78e-25 | 100 |
musculoskeletal system | 7.23e-14 | 167 |
lateral plate mesoderm | 3.17e-12 | 203 |
connective tissue | 1.19e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.