FFCP PHASE1:Mm9::chr1:162723039..162723100,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=29809|HGNC=|MCL_coexpression_id=60|UniProt=A6H6A9|association_with_transcript=0bp_to_ENSMUST00000028048,ENSMUST00000028049,NM_013862,uc007dej.2,uc007dek.1_5end|description=CAGE_peak_3_at_Rabgap1l_5end|id=chr1:162723039..162723100,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!2.27e-07!10;UBERON:0000411!2.27e-07!10;UBERON:0001950!2.27e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.26e-07,10;UBERON:0000411,2.26e-07,10;UBERON:0001950,2.26e-07,10|phase1_expression=3.20297694209588,10.1202868215415,7.73498706962211,16.030603199262,15.5277676283368,4.53274034162102,1.16806320297763,4.13194635013044,2.39340827657833,1.17032263160997,2.39705155515707,3.19088635981346,2.05440875917447,1.31130603628496,15.9892685671518,13.3633676477285,20.9868563438444,6.30924330716475,7.12995054749842,3.81950686618227,17.4338744809693,3.17731043842833,4.17919662622297,2.3998863419011,1.60586496747019,2.29692785646008,6.03066794622705,4.30942465371778,1.14014051673824,4.53654233567875,2.66076612786366,5.71527606113668,6.76571266343027,0,6.64358725427932,3.65716219788683,5.10423390655923,2.09265815368454,0.7813353445238,4.18818995179039,3.52938892818609,3.41522742479223,3.88408282424923,3.9028013572429,3.75094645512204,3.12029478674859,0.782391344348039,0.218025156380447,0.659058548203415,1.36100929351998,0.55994568650145,0,4.19456515144341,3.62681071005672,3.6970317905671,1.02903774414379,2.0057340795713,3.6097046459421,7.48570905180512,5.81890077199236,5.07065122804943,1.35537812827653,0.889294796111139,0.899899717281399,0.988866362566974,0,0.299600110518405,1.53687322128622,5.28817022773236,2.8351247049655,1.89292465216244,3.42781181284564,2.87129103237098,4.65465037016825,2.97120960156533,1.83843757322004,6.60695285996332,12.7687338085188,13.5173749265494,5.80299666012853,3.7509933876988,1.56274011167028,8.37548997004143,9.56696437053856,11.1542720877071,6.77645746589436,6.26435395516053,5.77838282058432,0.757261933331841,1.36028808192214,2.31891590961342,3.44169550792555,4.0798280022465,1.07940638327563,3.89865850468601,4.92829575807069,5.61777680527007,2.89731548382698,2.07828803682295,3.88673531961374,2.53518155598025,6.41632387071589,5.09610479413291,7.11066703153331,0.432982082022428,0.760079596425296,1.01104889002957,5.25245846707676,13.4647699496529,4.75014845007439,2.25530924795977,0.913396434936424,1.38369298353635,2.26083960828934,4.11560474974967,1.50799909595611,5.43828929015623,5.78397427679647,1.76922110389975,5.17653919831709,6.40440403535141,6.78825354389311,0,17.8596286177044,12.3573557019938,6.38642638021478,2.51611761462433,1.79970819298022,3.04968544975355,17.2259235315546,20.1300265240196,11.8115090986093,30.0716073932638,23.5258220743904,13.5062228963714,18.9822277789276,4.07357455401265,6.84238338355512,6.06534620240819,8.41767423545896,3.6433724029557,2.75882525320168,2.70093194708024,3.31550599238573,6.80364991513279,6.79002717509704,4.40398105430725,10.8655415710387,2.37124792226126,5.10586416453112,4.92663147659057,3.28793598641362,3.89266148915837,4.52727816478817,5.96768195583036,3.58261680273288,0,1.54408744268829,1.70498099637356,8.07790512888457,8.44293815931946,5.40186184383045,6.62885259638589,8.06733350164356,10.3358965634543,10.9290954032692,7.77992864058896,13.1944836874902,10.2027106946358,8.37254066803386,10.4578764314154,11.6959989940266,10.3188554186794,10.8707199195901,25.0245038791311,8.33527360272204,15.8601015832223,5.28901133327089,2.55945900642281,3.71578674976702,3.73715637834071,5.64713868945359,6.67134131534611,5.1360919050391,6.16887780007865,3.95277491337626,7.28872105520782,4.77495532898762,7.60359939764569,8.98819408654222,7.99710784536369,8.96135729644652,0.948339504765408,2.62771579002376,4.50830942692322,3.86937522906097,3.49114476901726,4.06787755363848,5.88099795255593,5.60918562322488,5.96595165797224,6.29325536001183,3.55743152504579,6.84064933435986,7.66580080941492,6.97072548393047,11.7658870405332,7.71766911207734,9.16653066413111,8.0554918486227,7.29608520487659,5.21666685057355,23.0029130443767,5.20997326735905,3.74445207737473,4.79899868099512,5.20252499213545,6.75420929908714,3.32555742299888,1.70542270593436,3.09633455239849,3.22515662972857,4.45911471748154,5.02518772325447,3.80869825417622,3.51240566144038,3.4679731703362,5.53661724121937,4.30527875375215,3.27726629431476,3.10832967358612,4.05017364028232,1.50791283939272,0,2.95058563811422,1.65562047782839,17.6605648986571,16.175212749724,5.40985319743029,3.53459298086122,0.631016438832513,1.17131623288992,2.15423397732799,1.43381278771531,2.89638276307112,2.83076530788832,0.809621403349789,2.63030272120181,3.16230222357219,22.8138134659483,5.25178315270594,2.67098405500883,4.23506094319298,5.27904393512113,1.32745138339963,1.94224508923985,2.41858845571801,1.69744571780308,2.06711325016541,1.84461088766356,3.87642439752332,3.27180356529755,2.49548164869305,3.16036757935816,0,0,6.80879211507576,2.52085531643834,0.905510786479282,2.57204442037911,1.59606210278046,2.85390108163313,3.78462747384878,1.8267896946876,1.64270195644597,2.54198485036584,3.08739757276947,9.39851641766436,5.9741837877485,5.97097956788743,5.49112782414428,8.69946768648825,6.12109756922687,16.5028518789354,5.12612642393558,2.47664241555867,5.92622487583077,16.0113188453987,10.798843989961,11.2101304871196,3.39956859987711,2.93898049879682,3.86959926652387,0.954670618015114,1.89801596148681,3.25311147402958,3.02414954301044,1.67270636811575,3.71216358368502,3.2367443132357,4.87655388779482,5.75863072364865,3.49960427887841,7.45607175704311,55.2419079910507,3.13984746692355,1.32366792365678,6.02798683866548,3.48731523389874,3.21016638432478,7.15879155739099,7.42164993610516,15.8337610082823,34.5465292781189,28.2269406132708,4.4241556887945,1.21635129174099,3.08132871494482,3.37794139742267,3.58053391334963,3.77494574084403,5.7693815769585,3.54454865218985,6.25991989678515,7.69688747215498,6.55370203389463,4.97035191772737,4.61816839873581,7.01261413089414,5.8949899739955,1.10992976687032,0.538283139656854,0.503653849092235,3.47741269257943,3.00291960721891,4.76194223094889,4.07299920250225,0.501572104035363,19.2015626489803,11.5081309126794,16.0410743763031,13.0608418581203,27.4033007908257,24.9279986138601,20.925697507186,20.7147753483141,26.2822597210839,24.8524949640874,2.80225838477277,3.99024873401031,3.92687293234509,4.132814190161,3.5634237646757,5.1476182366004,7.55638874525492,7.62329711783909,4.49286893428541,7.32821914115013,5.57654459758527,7.73367999682912,6.08669798554236,6.78666615491614,6.54764346093991,5.23923060411381,7.3007125345259,6.94473193669338,7.41754621445952,5.2991611248383,5.14303878578123,5.14679837862079,5.24559617884106,4.94177816549917,6.39943786824248,6.93839784711747,6.21955107767427,4.20911538300549,6.11118512306378,7.85599180320834,5.81311588808453,5.1222330835293,4.50154147486658,5.11291575913688,3.85813221962283,5.49583271463481,5.6143586026898,5.80151845930405,4.97349663378993,6.39715115446595,3.94175320554716|short_description=p3@Rabgap1l}} | ||
|EntrezGene=29809 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt=A6H6A9 | |||
|association_with_transcript=0bp_to_ENSMUST00000028048,ENSMUST00000028049,NM_013862,uc007dej.2,uc007dek.1_5end | |||
|description=CAGE_peak_3_at_Rabgap1l_5end | |||
|id=chr1:162723039..162723100,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!2.27e-07!10;UBERON:0000411!2.27e-07!10;UBERON:0001950!2.27e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.26e-07,10;UBERON:0000411,2.26e-07,10;UBERON:0001950,2.26e-07,10 | |||
|phase1_expression=3.20297694209588,10.1202868215415,7.73498706962211,16.030603199262,15.5277676283368,4.53274034162102,1.16806320297763,4.13194635013044,2.39340827657833,1.17032263160997,2.39705155515707,3.19088635981346,2.05440875917447,1.31130603628496,15.9892685671518,13.3633676477285,20.9868563438444,6.30924330716475,7.12995054749842,3.81950686618227,17.4338744809693,3.17731043842833,4.17919662622297,2.3998863419011,1.60586496747019,2.29692785646008,6.03066794622705,4.30942465371778,1.14014051673824,4.53654233567875,2.66076612786366,5.71527606113668,6.76571266343027,0,6.64358725427932,3.65716219788683,5.10423390655923,2.09265815368454,0.7813353445238,4.18818995179039,3.52938892818609,3.41522742479223,3.88408282424923,3.9028013572429,3.75094645512204,3.12029478674859,0.782391344348039,0.218025156380447,0.659058548203415,1.36100929351998,0.55994568650145,0,4.19456515144341,3.62681071005672,3.6970317905671,1.02903774414379,2.0057340795713,3.6097046459421,7.48570905180512,5.81890077199236,5.07065122804943,1.35537812827653,0.889294796111139,0.899899717281399,0.988866362566974,0,0.299600110518405,1.53687322128622,5.28817022773236,2.8351247049655,1.89292465216244,3.42781181284564,2.87129103237098,4.65465037016825,2.97120960156533,1.83843757322004,6.60695285996332,12.7687338085188,13.5173749265494,5.80299666012853,3.7509933876988,1.56274011167028,8.37548997004143,9.56696437053856,11.1542720877071,6.77645746589436,6.26435395516053,5.77838282058432,0.757261933331841,1.36028808192214,2.31891590961342,3.44169550792555,4.0798280022465,1.07940638327563,3.89865850468601,4.92829575807069,5.61777680527007,2.89731548382698,2.07828803682295,3.88673531961374,2.53518155598025,6.41632387071589,5.09610479413291,7.11066703153331,0.432982082022428,0.760079596425296,1.01104889002957,5.25245846707676,13.4647699496529,4.75014845007439,2.25530924795977,0.913396434936424,1.38369298353635,2.26083960828934,4.11560474974967,1.50799909595611,5.43828929015623,5.78397427679647,1.76922110389975,5.17653919831709,6.40440403535141,6.78825354389311,0,17.8596286177044,12.3573557019938,6.38642638021478,2.51611761462433,1.79970819298022,3.04968544975355,17.2259235315546,20.1300265240196,11.8115090986093,30.0716073932638,23.5258220743904,13.5062228963714,18.9822277789276,4.07357455401265,6.84238338355512,6.06534620240819,8.41767423545896,3.6433724029557,2.75882525320168,2.70093194708024,3.31550599238573,6.80364991513279,6.79002717509704,4.40398105430725,10.8655415710387,2.37124792226126,5.10586416453112,4.92663147659057,3.28793598641362,3.89266148915837,4.52727816478817,5.96768195583036,3.58261680273288,0,1.54408744268829,1.70498099637356,8.07790512888457,8.44293815931946,5.40186184383045,6.62885259638589,8.06733350164356,10.3358965634543,10.9290954032692,7.77992864058896,13.1944836874902,10.2027106946358,8.37254066803386,10.4578764314154,11.6959989940266,10.3188554186794,10.8707199195901,25.0245038791311,8.33527360272204,15.8601015832223,5.28901133327089,2.55945900642281,3.71578674976702,3.73715637834071,5.64713868945359,6.67134131534611,5.1360919050391,6.16887780007865,3.95277491337626,7.28872105520782,4.77495532898762,7.60359939764569,8.98819408654222,7.99710784536369,8.96135729644652,0.948339504765408,2.62771579002376,4.50830942692322,3.86937522906097,3.49114476901726,4.06787755363848,5.88099795255593,5.60918562322488,5.96595165797224,6.29325536001183,3.55743152504579,6.84064933435986,7.66580080941492,6.97072548393047,11.7658870405332,7.71766911207734,9.16653066413111,8.0554918486227,7.29608520487659,5.21666685057355,23.0029130443767,5.20997326735905,3.74445207737473,4.79899868099512,5.20252499213545,6.75420929908714,3.32555742299888,1.70542270593436,3.09633455239849,3.22515662972857,4.45911471748154,5.02518772325447,3.80869825417622,3.51240566144038,3.4679731703362,5.53661724121937,4.30527875375215,3.27726629431476,3.10832967358612,4.05017364028232,1.50791283939272,0,2.95058563811422,1.65562047782839,17.6605648986571,16.175212749724,5.40985319743029,3.53459298086122,0.631016438832513,1.17131623288992,2.15423397732799,1.43381278771531,2.89638276307112,2.83076530788832,0.809621403349789,2.63030272120181,3.16230222357219,22.8138134659483,5.25178315270594,2.67098405500883,4.23506094319298,5.27904393512113,1.32745138339963,1.94224508923985,2.41858845571801,1.69744571780308,2.06711325016541,1.84461088766356,3.87642439752332,3.27180356529755,2.49548164869305,3.16036757935816,0,0,6.80879211507576,2.52085531643834,0.905510786479282,2.57204442037911,1.59606210278046,2.85390108163313,3.78462747384878,1.8267896946876,1.64270195644597,2.54198485036584,3.08739757276947,9.39851641766436,5.9741837877485,5.97097956788743,5.49112782414428,8.69946768648825,6.12109756922687,16.5028518789354,5.12612642393558,2.47664241555867,5.92622487583077,16.0113188453987,10.798843989961,11.2101304871196,3.39956859987711,2.93898049879682,3.86959926652387,0.954670618015114,1.89801596148681,3.25311147402958,3.02414954301044,1.67270636811575,3.71216358368502,3.2367443132357,4.87655388779482,5.75863072364865,3.49960427887841,7.45607175704311,55.2419079910507,3.13984746692355,1.32366792365678,6.02798683866548,3.48731523389874,3.21016638432478,7.15879155739099,7.42164993610516,15.8337610082823,34.5465292781189,28.2269406132708,4.4241556887945,1.21635129174099,3.08132871494482,3.37794139742267,3.58053391334963,3.77494574084403,5.7693815769585,3.54454865218985,6.25991989678515,7.69688747215498,6.55370203389463,4.97035191772737,4.61816839873581,7.01261413089414,5.8949899739955,1.10992976687032,0.538283139656854,0.503653849092235,3.47741269257943,3.00291960721891,4.76194223094889,4.07299920250225,0.501572104035363,19.2015626489803,11.5081309126794,16.0410743763031,13.0608418581203,27.4033007908257,24.9279986138601,20.925697507186,20.7147753483141,26.2822597210839,24.8524949640874,2.80225838477277,3.99024873401031,3.92687293234509,4.132814190161,3.5634237646757,5.1476182366004,7.55638874525492,7.62329711783909,4.49286893428541,7.32821914115013,5.57654459758527,7.73367999682912,6.08669798554236,6.78666615491614,6.54764346093991,5.23923060411381,7.3007125345259,6.94473193669338,7.41754621445952,5.2991611248383,5.14303878578123,5.14679837862079,5.24559617884106,4.94177816549917,6.39943786824248,6.93839784711747,6.21955107767427,4.20911538300549,6.11118512306378,7.85599180320834,5.81311588808453,5.1222330835293,4.50154147486658,5.11291575913688,3.85813221962283,5.49583271463481,5.6143586026898,5.80151845930405,4.97349663378993,6.39715115446595,3.94175320554716 | |||
|short_description=p3@Rabgap1l | |||
}} | |||
Revision as of 19:25, 13 September 2013
| Short description: | p3@Rabgap1l |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Rabgap1l_5end |
| Coexpression cluster: | MCL_coexpression_mm9:60 |
| Association with transcript: | 0bp_to_ENSMUST00000028048, ENSMUST00000028049, NM_013862, uc007dej.2, uc007dek.1_5end |
| EntrezGene: | Rabgap1l |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| occipital lobe | 2.26e-07 | 10 |
| visual cortex | 2.26e-07 | 10 |
| neocortex | 2.26e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
