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FFCP PHASE1:Mm9::chr1:172104912..172104927,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=107652|HGNC=|MCL_coexpression_id=24|UniProt=|association_with_transcript=0bp_to_ENSMUST00000161112,ENSMUST00000162253_5end|description=CAGE_peak_1_at_Uap1_5end|id=chr1:172104912..172104927,-|ontology_enrichment_celltype=CL:0000066!4.30e-10!25;CL:0000223!2.44e-09!20;CL:0002076!2.23e-07!15|ontology_enrichment_celltype_v019_2=CL:0000066,4.23e-10,25;CL:0000223,2.40e-09,20;CL:0002076,2.20e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.16e-15!130;UBERON:0000925!2.16e-15!130;UBERON:0006595!2.16e-15!130;UBERON:0001007!1.23e-14!128;UBERON:0001555!1.23e-14!128;UBERON:0007026!1.23e-14!128;UBERON:0004921!1.22e-13!126;UBERON:0004185!1.22e-13!126;UBERON:0000160!2.24e-12!43;UBERON:0005409!3.46e-11!59;UBERON:0000344!2.24e-09!15;UBERON:0001242!3.05e-08!13;UBERON:0000060!3.05e-08!13;UBERON:0001262!3.05e-08!13;UBERON:0004786!3.05e-08!13;UBERON:0000490!6.70e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.15e-12,118;UBERON:0000925,1.15e-12,118;UBERON:0006595,1.15e-12,118;UBERON:0001007,5.60e-12,116;UBERON:0001555,5.60e-12,116;UBERON:0007026,5.60e-12,116;UBERON:0004921,4.54e-11,114;UBERON:0000160,2.02e-10,31;UBERON:0000344,2.20e-09,15;UBERON:0005409,5.45e-09,47;UBERON:0001242,3.01e-08,13;UBERON:0001262,3.01e-08,13;UBERON:0004786,3.01e-08,13;UBERON:0000490,6.62e-07,66|phase1_expression=4.00372117761985,203.452662653747,179.269700319477,202.651021575576,213.88247668709,106.60333766405,108.629877876919,3.61545305636414,70.535149797985,71.857809580852,3.93801326918661,3.11111420081812,2.39681021903688,1.83582845079895,2.99798785634096,2.63217847606774,2.09868563438444,1.10411757875383,0.411343300817216,1.69755860719212,8.24919914465377,0.992909512008853,0.522399578277871,56.637317668866,61.2522780449344,135.518743531145,152.058984644153,129.067268378848,104.512880701006,72.0806171113402,65.4105006433149,1.90509202037889,2.46025915033828,0,12.9983228888074,7.31432439577366,19.3960888449251,7.53356935326434,7.813353445238,8.89990364755457,16.4704816648684,6.83045484958446,6.311634589405,6.04304726282771,6.18399280439039,9.72797786456912,0,1.09012578190223,1.75748946187577,4.08302788055995,2.09979632438044,1.43752564364972,2.85230430298152,4.35217285206807,3.36093799142464,15.6928255981928,7.73640287834643,10.3134418455488,0.404632921719196,0.528990979272033,0,2.03306719241479,2.66788438833342,1.7997994345628,0,0.7104801149461,0.299600110518405,1.15265491596466,0.207379224616955,0.270011876663381,0.630974884054146,1.42825492201902,1.76694832761291,0.61245399607477,0.766763768145891,0.919218786610021,1.10115880999389,2.29837208553338,1.84327839907492,0.263772575460388,0.640413505216868,1.04182674111352,1.3959149950069,3.37657566019008,1.68078072554491,0.294628585473668,1.13897344639282,1.86399445825301,8.5570598466498,19.1951762671235,17.3918693221007,29.2544118173671,144.153922746043,37.2395202230094,12.9955283489534,10.7526452903361,18.9599967177865,11.0779709675738,11.4305842025262,11.3068663843309,2.81686839553361,3.84979432242953,10.1922095882658,14.2213340630666,57.3701258679717,46.8715751128932,49.5413956114488,34.1409800359989,17.0899003207133,5.49235914539852,3.29622120855658,2.74018930480927,2.7673859670727,1.95939432718409,3.64524992120685,2.89033160058254,5.6854842578906,35.5714418022983,4.42305275974937,5.66183974815932,3.97514733228708,5.81850303762267,113.698974343055,0.878342391034642,0.209446706813455,40.617671778166,24.6819156482196,24.5960119707297,20.2041661046173,0.748953197024114,0,0.125654352112864,0.695297280769106,1.27857728665165,0.62336413367868,1.29793010454206,8.45266719957625,7.2156042953854,8.33985102831127,14.0996043443938,1.82168620147785,2.06911893990126,3.06105620669094,2.71268672104287,3.26575195926374,1.66547836370305,2.43624483855295,10.8655415710387,3.01795190105979,3.9712276835242,3.87092473160687,5.04150184583422,7.22922847986555,7.66154766348766,9.67176041117334,2.9855140022774,17.5553296828309,16.2129181482271,17.3339734631312,5.38527008592305,3.75241695969754,7.92273070428465,3.07768156260773,4.13204886669548,4.9365476123961,6.27841650826101,5.633741429392,9.34122738937356,6.25327429671226,7.71587081171748,5.35054143002648,10.3801991071986,13.173006917463,10.6023070820694,0.841159794256509,0.823236899034275,40.3110915240234,35.1719253662514,2.13288250535234,1.62565670302307,3.99489130098489,4.63872106633688,4.89231696458715,10.6526350623033,32.2679761850268,10.2113351928887,9.80207314321051,7.75930240960488,15.0122347081723,44.0421510240569,86.0229438501283,81.4487807610362,1.70701110857774,1.94222471436539,2.25415471346161,3.46207257337034,3.49114476901726,2.45475369616115,5.88099795255593,11.8088118383682,9.41992367048249,6.54004968785543,34.0920521150221,2.50267658574141,4.52085688760367,6.74586337154561,4.86864291332407,4.3411888755435,7.38414970166117,8.91858026097513,5.18832725680113,10.9824565275233,8.62609239164127,6.69853705803306,8.42501717409313,14.6495749209325,20.8100999685418,19.78018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|EntrezGene=107652
|HGNC=
|MCL_coexpression_id=24
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000161112,ENSMUST00000162253_5end
|description=CAGE_peak_1_at_Uap1_5end
|id=chr1:172104912..172104927,-
|ontology_enrichment_celltype=CL:0000066!4.30e-10!25;CL:0000223!2.44e-09!20;CL:0002076!2.23e-07!15
|ontology_enrichment_celltype_v019_2=CL:0000066,4.23e-10,25;CL:0000223,2.40e-09,20;CL:0002076,2.20e-07,15
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!2.16e-15!130;UBERON:0000925!2.16e-15!130;UBERON:0006595!2.16e-15!130;UBERON:0001007!1.23e-14!128;UBERON:0001555!1.23e-14!128;UBERON:0007026!1.23e-14!128;UBERON:0004921!1.22e-13!126;UBERON:0004185!1.22e-13!126;UBERON:0000160!2.24e-12!43;UBERON:0005409!3.46e-11!59;UBERON:0000344!2.24e-09!15;UBERON:0001242!3.05e-08!13;UBERON:0000060!3.05e-08!13;UBERON:0001262!3.05e-08!13;UBERON:0004786!3.05e-08!13;UBERON:0000490!6.70e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.15e-12,118;UBERON:0000925,1.15e-12,118;UBERON:0006595,1.15e-12,118;UBERON:0001007,5.60e-12,116;UBERON:0001555,5.60e-12,116;UBERON:0007026,5.60e-12,116;UBERON:0004921,4.54e-11,114;UBERON:0000160,2.02e-10,31;UBERON:0000344,2.20e-09,15;UBERON:0005409,5.45e-09,47;UBERON:0001242,3.01e-08,13;UBERON:0001262,3.01e-08,13;UBERON:0004786,3.01e-08,13;UBERON:0000490,6.62e-07,66
|phase1_expression=4.00372117761985,203.452662653747,179.269700319477,202.651021575576,213.88247668709,106.60333766405,108.629877876919,3.61545305636414,70.535149797985,71.857809580852,3.93801326918661,3.11111420081812,2.39681021903688,1.83582845079895,2.99798785634096,2.63217847606774,2.09868563438444,1.10411757875383,0.411343300817216,1.69755860719212,8.24919914465377,0.992909512008853,0.522399578277871,56.637317668866,61.2522780449344,135.518743531145,152.058984644153,129.067268378848,104.512880701006,72.0806171113402,65.4105006433149,1.90509202037889,2.46025915033828,0,12.9983228888074,7.31432439577366,19.3960888449251,7.53356935326434,7.813353445238,8.89990364755457,16.4704816648684,6.83045484958446,6.311634589405,6.04304726282771,6.18399280439039,9.72797786456912,0,1.09012578190223,1.75748946187577,4.08302788055995,2.09979632438044,1.43752564364972,2.85230430298152,4.35217285206807,3.36093799142464,15.6928255981928,7.73640287834643,10.3134418455488,0.404632921719196,0.528990979272033,0,2.03306719241479,2.66788438833342,1.7997994345628,0,0.7104801149461,0.299600110518405,1.15265491596466,0.207379224616955,0.270011876663381,0.630974884054146,1.42825492201902,1.76694832761291,0.61245399607477,0.766763768145891,0.919218786610021,1.10115880999389,2.29837208553338,1.84327839907492,0.263772575460388,0.640413505216868,1.04182674111352,1.3959149950069,3.37657566019008,1.68078072554491,0.294628585473668,1.13897344639282,1.86399445825301,8.5570598466498,19.1951762671235,17.3918693221007,29.2544118173671,144.153922746043,37.2395202230094,12.9955283489534,10.7526452903361,18.9599967177865,11.0779709675738,11.4305842025262,11.3068663843309,2.81686839553361,3.84979432242953,10.1922095882658,14.2213340630666,57.3701258679717,46.8715751128932,49.5413956114488,34.1409800359989,17.0899003207133,5.49235914539852,3.29622120855658,2.74018930480927,2.7673859670727,1.95939432718409,3.64524992120685,2.89033160058254,5.6854842578906,35.5714418022983,4.42305275974937,5.66183974815932,3.97514733228708,5.81850303762267,113.698974343055,0.878342391034642,0.209446706813455,40.617671778166,24.6819156482196,24.5960119707297,20.2041661046173,0.748953197024114,0,0.125654352112864,0.695297280769106,1.27857728665165,0.62336413367868,1.29793010454206,8.45266719957625,7.2156042953854,8.33985102831127,14.0996043443938,1.82168620147785,2.06911893990126,3.06105620669094,2.71268672104287,3.26575195926374,1.66547836370305,2.43624483855295,10.8655415710387,3.01795190105979,3.9712276835242,3.87092473160687,5.04150184583422,7.22922847986555,7.66154766348766,9.67176041117334,2.9855140022774,17.5553296828309,16.2129181482271,17.3339734631312,5.38527008592305,3.75241695969754,7.92273070428465,3.07768156260773,4.13204886669548,4.9365476123961,6.27841650826101,5.633741429392,9.34122738937356,6.25327429671226,7.71587081171748,5.35054143002648,10.3801991071986,13.173006917463,10.6023070820694,0.841159794256509,0.823236899034275,40.3110915240234,35.1719253662514,2.13288250535234,1.62565670302307,3.99489130098489,4.63872106633688,4.89231696458715,10.6526350623033,32.2679761850268,10.2113351928887,9.80207314321051,7.75930240960488,15.0122347081723,44.0421510240569,86.0229438501283,81.4487807610362,1.70701110857774,1.94222471436539,2.25415471346161,3.46207257337034,3.49114476901726,2.45475369616115,5.88099795255593,11.8088118383682,9.41992367048249,6.54004968785543,34.0920521150221,2.50267658574141,4.52085688760367,6.74586337154561,4.86864291332407,4.3411888755435,7.38414970166117,8.91858026097513,5.18832725680113,10.9824565275233,8.62609239164127,6.69853705803306,8.42501717409313,14.6495749209325,20.8100999685418,19.7801843758981,4.80358294433172,1.89491411770485,3.7481944581666,1.69745085775188,1.40814148973101,3.68513766371995,3.80869825417622,8.58588050574315,3.94087860265477,4.4292937929755,3.6674596791222,3.93271955317771,4.48980952851328,3.61622646453779,0,0.54390568381871,22.6211565588757,18.7636987487218,1.44495530989013,1.40654023910644,9.67216177722385,9.59389523376617,4.41711507182759,3.90438744296638,1.29254038639679,2.15071918157297,2.00518806674155,0.849229592366497,2.42886421004937,3.21481443702443,2.37172666767914,0,7.38088443082997,3.02711526234334,3.58351310577867,4.45419332025846,19.9117707509944,4.61283208694465,3.32555912661226,11.8821200246216,12.993283286754,11.0676653259814,10.0787034335606,10.1789444253702,7.48644494607915,16.7499481705982,15.8127912862498,12.3762651897824,1.02131881726136,1.26042765821917,1.16422815404479,1.50035924522115,1.41872186913819,0.891844088010353,1.81003922662333,0.608929898229199,11.7335854031855,22.4541995115649,10.5853631066382,7.09010887648364,15.9849782428946,5.42816324353403,4.77489376012546,2.9545361954111,28.5651219897254,1.29797711407357,3.2465467351592,2.47664241555867,2.77791791054568,1.50694765603753,1.36694227721025,1.60144721244566,47.0840251082979,54.5810664062266,51.1339903076368,91.6483793294509,2.21435195506795,5.28630614529807,6.04829908602087,10.4544148007234,21.8362563746178,14.9699424487151,15.2082358534618,37.1693437617322,81.2685882539541,41.629733976824,1.69107881605257,1.49516546043979,1.65458490457098,2.33341426012857,3.48731523389874,1.35164900392623,3.40335992072686,1.95306577265925,1.04859344425711,0.724752362478018,3.16833006883652,4.10814456816632,5.6763060281246,6.57350125854894,5.97635785697857,7.34009452236674,4.17230845040656,3.4856680360791,3.2491695978407,3.43285929823702,2.97206545954499,2.92395936896837,4.58052039476836,3.36741445741153,3.85693777199178,19.0453522236778,3.10780334723691,2.69141569828427,9.06576928366024,5.79568782096571,13.1377732815827,17.2162526811229,13.5052078819811,4.01257683228291,3.3885110557024,1.84130094602871,2.86447756719698,1.71853182343688,1.37016503954128,0,1.35004500046361,0,2.26571204492102,1.03552062350364,2.07574695168353,1.59609949360412,2.39027048055788,5.59145449257076,5.24032906569956,4.96377472815038,5.33392146723877,5.97501665992793,4.49286893428541,5.05394423527595,6.84394109703647,7.1678009726709,4.86935838843389,4.86591158277006,6.08815970929501,7.62069906052918,4.05595140806994,5.40145817298374,4.94503080963968,8.83193520806384,7.54312355247914,5.32427418478012,4.29185141905178,7.26732083161643,6.49354724865781,6.17686637609238,5.67076715905595,7.10288220882176,4.75314398460516,7.2948495315506,5.57584585183618,5.51625101303155,9.00308294973317,5.73266312388074,5.98010494041538,4.49659040288303,6.78401664491684,8.59484216193193,14.9204899013698,11.2501623750953,9.04284558919644
|short_description=p1@Uap1
}}

Revision as of 19:37, 13 September 2013

Short description:p1@Uap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Uap1_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: 0bp_to_ENSMUST00000161112, ENSMUST00000162253_5end
EntrezGene:Uap1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Uap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5203.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6179.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I3202.65
CD326+ enterocyte, pool2.CNhs13197.11849-124I4213.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7106.60
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8108.63
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E770.54
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F271.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.84
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D156.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D261.25
GP2+ M cell, pool1.CNhs13228.11845-124H9135.52
GP2+ M cell, pool2.CNhs13231.11846-124I1152.06
GP2+ M cell, pool3.CNhs13240.11847-124I2129.07
Ileum epithelium, pool1.CNhs13199.10252-104B9104.51
Ileum epithelium, pool2.CNhs13232.10253-104C172.08
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C865.41
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F719.40
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.90
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G916.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.18
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.36
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.69
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D98.56
Mouse Schwann, donor2.CNhs12573.11746-123F919.20
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G317.39
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F729.25
Mouse hepatocyte, donor1.CNhs13078.11714-123C4144.15
Mouse hepatocyte, donor3.CNhs12615.11637-122C837.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F610.75
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A718.96
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G157.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G246.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G349.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B634.14
accessory axillary lymph node, adult.CNhs10475.1063-29H917.09
adrenal gland, adult.CNhs10508.49-24D75.49
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C13.65
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H135.57
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F55.66
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H4113.70
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H740.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C724.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D124.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D420.20
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.45
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.22
epididymis, adult.CNhs10490.58-23B28.34
eyeball, adult.CNhs10484.31-12G414.10
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C63.27
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A210.87
forelimb, embryo E11.CNhs10596.335-25E23.02
forelimb, embryo E12.CNhs10600.359-14H23.97
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E77.23
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B59.67
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C817.56
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D216.21
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.33
heart, embryo E11.CNhs10586.331-24E95.39
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I97.92
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C84.13
heart, embryo E16.CNhs11021.457-17C64.94
heart, embryo E17.CNhs11025.479-18E56.28
heart, embryo E18.CNhs11030.1283-20G35.63
heart, neonate N00.CNhs11213.639-21E39.34
heart, neonate N03.CNhs11221.1349-25I26.25
heart, neonate N10.CNhs11118.749-24G17.72
heart, neonate N16.CNhs11209.782-15G15.35
heart, neonate N20.CNhs11127.821-26I610.38
heart, neonate N25.CNhs11196.1351-25D313.17
heart, neonate N30.CNhs11202.1390-42D210.60
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I340.31
intestine, adult.CNhs10496.178-9A335.17
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D83.99
intestine, embryo E16.CNhs10585.463-22H44.64
intestine, embryo E17.CNhs10582.482-18D34.89
intestine, embryo E18.CNhs10526.1289-20F710.65
intestine, neonate N00.CNhs11126.644-26D132.27
intestine, neonate N01.CNhs11192.1322-23E910.21
intestine, neonate N06.CNhs11102.688-20B89.80
intestine, neonate N07.CNhs11095.720-20F27.76
intestine, neonate N10.CNhs11098.755-23A515.01
intestine, neonate N20.CNhs11187.827-18D144.04
intestine, neonate N25.CNhs11121.1352-25E386.02
intestine, neonate N30.CNhs11131.1384-42G181.45
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G72.45
kidney, neonate N10.CNhs11206.758-6D55.88
kidney, neonate N20.CNhs11113.832-19I111.81
kidney, neonate N25.CNhs11122.1353-25F39.42
kidney, neonate N30.CNhs11203.1385-42H16.54
liver, adult pregnant day01.CNhs10466.508-5B234.09
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H64.52
liver, embryo E14.CNhs10594.409-16E16.75
liver, embryo E15.CNhs10520.433-16D74.87
liver, embryo E16.CNhs10523.462-17F54.34
liver, embryo E17.CNhs10510.481-18A37.38
liver, embryo E18.CNhs10579.499-43G48.92
liver, neonate N00.CNhs11117.641-24F45.19
liver, neonate N03.CNhs11123.1345-25G210.98
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H26.70
liver, neonate N10.CNhs11115.751-24B98.43
liver, neonate N20.CNhs11220.823-25A314.65
liver, neonate N25.CNhs11198.1368-26H120.81
liver, neonate N30.CNhs11106.1382-42D119.78
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G21.89
lung, embryo E14.CNhs10604.404-26F83.75
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C68.59
lung, neonate N06.CNhs11212.683-20E53.94
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C74.49
lung, neonate N30.CNhs11133.1394-42H23.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B622.62
mammary gland, adult pregnant day19.CNhs10476.588-5H218.76
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.41
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.67
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.59
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I77.38
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I43.58
oviduct, adult pregnant day01.CNhs10500.988-6G64.45
pancreas, adult.CNhs10486.34-16E419.91
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E511.88
pancreas, embryo E17.CNhs10599.1558-45G312.99
pancreas, embryo E18.CNhs10580.1535-43I711.07
pancreas, neonate N00.CNhs11105.645-26G910.08
pancreas, neonate N01.CNhs11138.1531-43D710.18
pancreas, neonate N02.CNhs11139.1539-43D87.49
pancreas, neonate N16.CNhs11136.787-43B616.75
pancreas, neonate N25.CNhs11094.1555-45E215.81
pancreas, neonate N30.CNhs11182.1548-44H512.38
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I711.73
placenta, adult pregnant day17.CNhs10464.577-18G322.45
prostate, adult.CNhs10470.859-1F810.59
skin, adult.CNhs10492.30-1C37.09
skin, neonate N00.CNhs11124.650-25G415.98
skin, neonate N03.CNhs11215.662-22H35.43
skin, neonate N06.CNhs11097.693-20I54.77
skin, neonate N10.CNhs11108.762-6C42.95
small intestine, neonate N16.CNhs11114.790-21I128.57
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H11.37
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C647.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C954.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D351.13
stomach, adult.CNhs10503.33-1H691.65
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D46.05
stomach, embryo E17.CNhs11006.1035-18D510.45
stomach, embryo E18.CNhs10999.1286-20C621.84
stomach, neonate N03.CNhs11193.1340-24B814.97
stomach, neonate N07.CNhs11210.718-18A915.21
stomach, neonate N25.CNhs11104.1355-25E437.17
stomach, neonate N30.CNhs11134.1386-42I181.27
submandibular gland, adult.CNhs10469.59-29C141.63
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B73.40
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I45.68
thymus, embryo E15.CNhs11005.430-45I26.57
thymus, embryo E16.CNhs11002.456-26C55.98
thymus, embryo E17.CNhs10581.478-18C17.34
thymus, embryo E18.CNhs10595.1273-19G44.17
thymus, neonate N02.CNhs11181.1541-43F83.49
thymus, neonate N03.CNhs11137.2104-43C73.25
thymus, neonate N06.CNhs11197.681-26C43.43
thymus, neonate N07.CNhs11211.713-19D32.97
thymus, neonate N10.CNhs11194.748-24E42.92
thymus, neonate N20.CNhs11186.820-7A24.58
thymus, neonate N25.CNhs11125.1362-25G73.37
thymus, neonate N30.CNhs11132.1393-42G23.86
tongue, adult.CNhs10499.32-1B419.05
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.69
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.07
urinary bladder, adult.CNhs10481.879-12E45.80
uterus, adult pregnant day19.CNhs10497.590-15F513.14
uterus, adult.CNhs10509.92-27E517.22
vagina, adult.CNhs10502.89-27D513.51
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B15.24
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.17
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.27
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.73
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B36.78
whole body, neonate N00.CNhs10525.657-19C28.59
whole body, neonate N01.CNhs10576.659-23C614.92
whole body, neonate N06.CNhs10515.692-21D111.25
whole body, neonate N10.CNhs10518.761-6B49.04





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell4.23e-1025
endodermal cell2.40e-0920
endo-epithelial cell2.20e-0715

Uber anatomy
Ontology termp-valuen
endoderm-derived structure1.15e-12118
endoderm1.15e-12118
presumptive endoderm1.15e-12118
digestive system5.60e-12116
digestive tract5.60e-12116
primitive gut5.60e-12116
subdivision of digestive tract4.54e-11114
intestine2.02e-1031
mucosa2.20e-0915
gastrointestinal system5.45e-0947
intestinal mucosa3.01e-0813
wall of intestine3.01e-0813
gastrointestinal system mucosa3.01e-0813
unilaminar epithelium6.62e-0766







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