FFCP PHASE1:Mm9::chr1:192735744..192735752,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:192735744..192735752,+|id=chr1:192735744..192735752,+|ontology_enrichment_celltype=CL:0002563!3.96e-08!9;CL:0002251!3.96e-08!9;CL:0000239!6.18e-08!6;CL:0000677!6.18e-08!6;CL:0000212!6.18e-08!6;CL:0000584!6.18e-08!6|ontology_enrichment_celltype_v019_2=CL:0000239,1.88e-24,6;CL:0000677,1.88e-24,6;CL:0000584,1.88e-24,6;CL:0000075,5.01e-21,7;CL:0002563,1.89e-16,9;CL:0002251,1.89e-16,9;CL:0000066,8.76e-13,25;CL:0000682,1.42e-12,3;CL:0002076,5.18e-10,15;CL:0000223,1.41e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!3.96e-08!9;UBERON:0004808!3.96e-08!9;UBERON:0001277!3.96e-08!9;UBERON:0001242!9.12e-08!13;UBERON:0000060!9.12e-08!13;UBERON:0001262!9.12e-08!13;UBERON:0004786!9.12e-08!13;UBERON:0000344!1.42e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.89e-16,9;UBERON:0004808,1.89e-16,9;UBERON:0001277,1.89e-16,9;UBERON:0000485,1.57e-13,11;UBERON:0001242,1.67e-11,13;UBERON:0001262,1.67e-11,13;UBERON:0004786,1.67e-11,13;UBERON:0000344,5.18e-10,15;UBERON:0000160,2.75e-07,31|phase1_expression=0,4.18770489167233,7.27998783023258,13.6108895088074,9.01612313903425,0.839396359559449,0.700837921786577,0.129123323441576,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.17008658030214,0,0,0,0.22940928106717,1.14846392823004,1.29228598847722,0.861884930743556,0,0.252030129759931,0,0.635030673459631,1.23012957516914,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0,0.782391344348039,0,0,0.194429899074283,0.279972843250725,0,0,0,0.336093799142464,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0.182975287204819,0,0.558365998002762,1.12552522006336,0.15279824777681,0,0.142371680799103,0,0,0,0.579728977403356,0,0.679971333707751,0,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0,0.766371165625774,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0.991256348951394,1.05780226665418,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0.648414149624083,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,1.26203287766503,0,0.215423397732799,0,0.668396022247182,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0.329098041204242,0,0,0.21183207086382,0,0.32977250588296,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,0.341741761595705,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0|short_description=p@chr1:192735744..192735752,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:192735744..192735752,+ | |||
|id=chr1:192735744..192735752,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.96e-08!9;CL:0002251!3.96e-08!9;CL:0000239!6.18e-08!6;CL:0000677!6.18e-08!6;CL:0000212!6.18e-08!6;CL:0000584!6.18e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.88e-24,6;CL:0000677,1.88e-24,6;CL:0000584,1.88e-24,6;CL:0000075,5.01e-21,7;CL:0002563,1.89e-16,9;CL:0002251,1.89e-16,9;CL:0000066,8.76e-13,25;CL:0000682,1.42e-12,3;CL:0002076,5.18e-10,15;CL:0000223,1.41e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!3.96e-08!9;UBERON:0004808!3.96e-08!9;UBERON:0001277!3.96e-08!9;UBERON:0001242!9.12e-08!13;UBERON:0000060!9.12e-08!13;UBERON:0001262!9.12e-08!13;UBERON:0004786!9.12e-08!13;UBERON:0000344!1.42e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.89e-16,9;UBERON:0004808,1.89e-16,9;UBERON:0001277,1.89e-16,9;UBERON:0000485,1.57e-13,11;UBERON:0001242,1.67e-11,13;UBERON:0001262,1.67e-11,13;UBERON:0004786,1.67e-11,13;UBERON:0000344,5.18e-10,15;UBERON:0000160,2.75e-07,31 | |||
|phase1_expression=0,4.18770489167233,7.27998783023258,13.6108895088074,9.01612313903425,0.839396359559449,0.700837921786577,0.129123323441576,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.17008658030214,0,0,0,0.22940928106717,1.14846392823004,1.29228598847722,0.861884930743556,0,0.252030129759931,0,0.635030673459631,1.23012957516914,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0.503587271902309,0.101376931219515,0,0.782391344348039,0,0,0.194429899074283,0.279972843250725,0,0,0,0.336093799142464,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0,0,0.131886287730194,0.182975287204819,0,0.558365998002762,1.12552522006336,0.15279824777681,0,0.142371680799103,0,0,0,0.579728977403356,0,0.679971333707751,0,0,0,0,0.170430322578058,0.259786004602869,0.35333957451034,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0,0.766371165625774,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0,0.12811372028485,0,0.517406741478031,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0.991256348951394,1.05780226665418,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0.648414149624083,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0,1.26203287766503,0,0.215423397732799,0,0.668396022247182,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258717367565509,0,0,0,0.329098041204242,0,0,0.21183207086382,0,0.32977250588296,0.161464426695906,0.0603129249281559,0,0,0,0.18542530201051,0.341741761595705,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0,0.241584120826006,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0.572895513439397,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr1:192735744..192735752,+ | |||
}} |
Revision as of 20:05, 13 September 2013
Short description: | p@chr1:192735744..192735752, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:192735744..192735752, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.88e-24 | 6 |
gut absorptive cell | 1.88e-24 | 6 |
enterocyte | 1.88e-24 | 6 |
columnar/cuboidal epithelial cell | 5.01e-21 | 7 |
intestinal epithelial cell | 1.89e-16 | 9 |
epithelial cell of alimentary canal | 1.89e-16 | 9 |
epithelial cell | 8.76e-13 | 25 |
M cell of gut | 1.42e-12 | 3 |
endo-epithelial cell | 5.18e-10 | 15 |
endodermal cell | 1.41e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.89e-16 | 9 |
gastrointestinal system epithelium | 1.89e-16 | 9 |
intestinal epithelium | 1.89e-16 | 9 |
simple columnar epithelium | 1.57e-13 | 11 |
intestinal mucosa | 1.67e-11 | 13 |
wall of intestine | 1.67e-11 | 13 |
gastrointestinal system mucosa | 1.67e-11 | 13 |
mucosa | 5.18e-10 | 15 |
intestine | 2.75e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.