FFCP PHASE1:Hg19::chr7:102553470..102553487,+: Difference between revisions
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{{FFCP | 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94,0,2.41528552309231,0|short_description=p2@LRRC17}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10234 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16895 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=18bp_to_ENST00000249377_5end | |||
|coexpression_cluster_id=C4637 | |||
|description=CAGE_peak_2_at_LRRC17_5end | |||
|id=chr7:102553470..102553487,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.95e-39!180;CL:0000680!4.17e-32!57;CL:0000056!4.17e-32!57;CL:0000355!4.17e-32!57;CL:0000183!1.19e-30!59;CL:0000187!3.29e-30!54;CL:0000393!3.35e-27!60;CL:0000211!3.35e-27!60;CL:0000192!4.84e-24!42;CL:0000514!4.84e-24!42;CL:0000359!3.06e-19!32;CL:0000222!9.11e-17!119;CL:0002494!7.54e-11!16;CL:0000057!5.93e-09!75;CL:0000220!9.08e-09!246;CL:0002321!2.12e-08!248;CL:0002539!4.40e-08!10;CL:0002371!1.62e-07!591;CL:0000243!7.06e-07!15;CL:0000125!7.06e-07!15;CL:0000030!7.06e-07!15;CL:0000339!7.06e-07!15;CL:0000048!8.67e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.66e-22;32!CL:0000192;1.45e-21;43!CL:0000187;1.62e-20;55!CL:0000393;2.65e-17;61!CL:0000211;2.65e-17;61!CL:0002494;6.07e-13;16!CL:0002539;1.41e-09;10!CL:0000048;5.56e-09;58!CL:0000723;7.49e-09;61!CL:0000134;8.84e-09;55!CL:0000243;2.58e-07;15!CL:0000125;2.58e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,7.49e-40,58;CL:0000056,7.49e-40,58;CL:0000355,7.49e-40,58;CL:0000187,1.64e-37,55;CL:0000393,1.40e-33,61;CL:0000211,1.40e-33,61;CL:0000192,6.56e-30,43;CL:0000514,6.56e-30,43;CL:0000359,2.93e-23,32;CL:0000222,2.33e-16,121;CL:0002494,5.90e-13,16;CL:0000048,7.64e-12,427;CL:0000723,5.00e-11,433;CL:0000034,5.36e-10,441;CL:0002539,1.45e-09,10;CL:0002321,2.81e-08,250;CL:0000243,2.65e-07,15;CL:0000125,2.65e-07,15;CL:0000030,2.65e-07,15;CL:0000339,2.65e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.45e-21;43!CL:0000355;1.48e-20;58!CL:0000339;2.58e-07;15 | |||
|ontology_enrichment_disease=DOID:2394!6.27e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.32e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.33e-09,14 | |||
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| |||
|short_description=p2@LRRC17 | |||
}} |
Revision as of 22:27, 13 September 2013
Short description: | p2@LRRC17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LRRC17_5end |
Coexpression cluster: | C4637_Smooth_leiomyoma_mesenchymal_Iris_glioblastoma_Lens_Ciliary |
Association with transcript: | 18bp_to_ENST00000249377_5end |
EntrezGene: | LRRC17 |
HGNC: | 16895 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 7.49e-40 | 58 |
myoblast | 7.49e-40 | 58 |
multi-potent skeletal muscle stem cell | 7.49e-40 | 58 |
muscle cell | 1.64e-37 | 55 |
electrically responsive cell | 1.40e-33 | 61 |
electrically active cell | 1.40e-33 | 61 |
smooth muscle cell | 6.56e-30 | 43 |
smooth muscle myoblast | 6.56e-30 | 43 |
vascular associated smooth muscle cell | 2.93e-23 | 32 |
mesodermal cell | 2.33e-16 | 121 |
cardiocyte | 5.90e-13 | 16 |
multi fate stem cell | 7.64e-12 | 427 |
somatic stem cell | 5.00e-11 | 433 |
stem cell | 5.36e-10 | 441 |
aortic smooth muscle cell | 1.45e-09 | 10 |
embryonic cell | 2.81e-08 | 250 |
glial cell (sensu Vertebrata) | 2.65e-07 | 15 |
glial cell | 2.65e-07 | 15 |
glioblast | 2.65e-07 | 15 |
glioblast (sensu Vertebrata) | 2.65e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.33e-09 | 14 |
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