FFCP PHASE1:Hg19::chr7:12250342..12250347,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C311|description=CAGE_peak_at_chr7:12250342..12250347,+|id=chr7:12250342..12250347,+|ontology_enrichment_celltype=CL:0000066!6.37e-08!254;CL:0000623!6.48e-08!3;CL:0000825!6.48e-08!3|ontology_enrichment_celltype_v019=CL:0000771;2.45e-12;2!CL:0002231;8.96e-09;3!CL:0002563;7.27e-07;4|ontology_enrichment_celltype_v019_2=CL:0000771,2.32e-12,2;CL:0002231,8.96e-09,3;CL:0002563,7.27e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!2.13e-16!106;DOID:0050687!1.20e-13!143;DOID:299!8.67e-08!25|ontology_enrichment_disease_v019=DOID:4929;2.45e-12;2!DOID:3119;2.64e-07;14|ontology_enrichment_disease_v019_2=DOID:4929,2.59e-12,2;DOID:3119,2.68e-07,14|ontology_enrichment_uberon=UBERON:0001052!5.79e-11!4;UBERON:0004907!9.53e-09!5;UBERON:0003350!3.66e-08!5;UBERON:0001046!4.31e-07!19|ontology_enrichment_uberon_v019=UBERON:0004913;2.93e-23;1!UBERON:0003703;2.93e-23;1!UBERON:0001174;2.93e-23;1!UBERON:0004914;2.93e-23;1!UBERON:0002394;5.43e-23;4!UBERON:0003928;5.43e-23;4!UBERON:0002294;1.35e-13;7!UBERON:0001173;1.35e-13;7!UBERON:0000160;8.74e-12;17!UBERON:0000058;8.27e-10;10!UBERON:0005409;2.31e-09;22!UBERON:0002114;1.17e-08;2!UBERON:0001052;6.50e-07;4!UBERON:0001242;7.27e-07;4!UBERON:0001262;7.27e-07;4!UBERON:0004786;7.27e-07;4!UBERON:0004808;7.27e-07;4!UBERON:0001277;7.27e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0004913,3.28e-23,1;UBERON:0003703,3.28e-23,1;UBERON:0001174,3.28e-23,1;UBERON:0004914,3.28e-23,1;UBERON:0002394,1.13e-15,6;UBERON:0003928,1.13e-15,6;UBERON:0000160,8.91e-12,17;UBERON:0002294,8.79e-11,9;UBERON:0001173,8.79e-11,9;UBERON:0004912,8.79e-11,9;UBERON:0002114,1.21e-08,2;UBERON:0005409,2.40e-08,25;UBERON:0003929,6.01e-07,54;UBERON:0001052,6.50e-07,4;UBERON:0005911,6.77e-07,82;UBERON:0001242,7.27e-07,4;UBERON:0001262,7.27e-07,4;UBERON:0004786,7.27e-07,4;UBERON:0004808,7.27e-07,4;UBERON:0001277,7.27e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,1.04535523804977,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,6.14942192715568,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7994634932355,0,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.269605053441981,4.65455054156584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.565412285735763,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0.146178634172371,0,0,0,0,0,0,0,0.195551382734803,0,0,0.39961921916426,0,0,0,0.576219191952599,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590564889088493,0,0,0,0.321506296930038,0.275078873194468,0.415440338029185,0.899895566206002,0,0,0,0.157611414598396,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.279759015438889,0,0,0,1.25812753484717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,3.10497781055795,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0.455324382702595,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,44.5632739668925,0.913158720509496,0.215927591218621,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.487671699929078,0,0,0,0,0,0,0.118920090777569,0,0,0,0.077174158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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C311 | |||
|description=CAGE_peak_at_chr7:12250342..12250347,+ | |||
|id=chr7:12250342..12250347,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.37e-08!254;CL:0000623!6.48e-08!3;CL:0000825!6.48e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000771;2.45e-12;2!CL:0002231;8.96e-09;3!CL:0002563;7.27e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,2.32e-12,2;CL:0002231,8.96e-09,3;CL:0002563,7.27e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.13e-16!106;DOID:0050687!1.20e-13!143;DOID:299!8.67e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:4929;2.45e-12;2!DOID:3119;2.64e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.59e-12,2;DOID:3119,2.68e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001052!5.79e-11!4;UBERON:0004907!9.53e-09!5;UBERON:0003350!3.66e-08!5;UBERON:0001046!4.31e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.93e-23;1!UBERON:0003703;2.93e-23;1!UBERON:0001174;2.93e-23;1!UBERON:0004914;2.93e-23;1!UBERON:0002394;5.43e-23;4!UBERON:0003928;5.43e-23;4!UBERON:0002294;1.35e-13;7!UBERON:0001173;1.35e-13;7!UBERON:0000160;8.74e-12;17!UBERON:0000058;8.27e-10;10!UBERON:0005409;2.31e-09;22!UBERON:0002114;1.17e-08;2!UBERON:0001052;6.50e-07;4!UBERON:0001242;7.27e-07;4!UBERON:0001262;7.27e-07;4!UBERON:0004786;7.27e-07;4!UBERON:0004808;7.27e-07;4!UBERON:0001277;7.27e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,3.28e-23,1;UBERON:0003703,3.28e-23,1;UBERON:0001174,3.28e-23,1;UBERON:0004914,3.28e-23,1;UBERON:0002394,1.13e-15,6;UBERON:0003928,1.13e-15,6;UBERON:0000160,8.91e-12,17;UBERON:0002294,8.79e-11,9;UBERON:0001173,8.79e-11,9;UBERON:0004912,8.79e-11,9;UBERON:0002114,1.21e-08,2;UBERON:0005409,2.40e-08,25;UBERON:0003929,6.01e-07,54;UBERON:0001052,6.50e-07,4;UBERON:0005911,6.77e-07,82;UBERON:0001242,7.27e-07,4;UBERON:0001262,7.27e-07,4;UBERON:0004786,7.27e-07,4;UBERON:0004808,7.27e-07,4;UBERON:0001277,7.27e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,1.04535523804977,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,6.14942192715568,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7994634932355,0,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.269605053441981,4.65455054156584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.565412285735763,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0.146178634172371,0,0,0,0,0,0,0,0.195551382734803,0,0,0.39961921916426,0,0,0,0.576219191952599,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590564889088493,0,0,0,0.321506296930038,0.275078873194468,0.415440338029185,0.899895566206002,0,0,0,0.157611414598396,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.279759015438889,0,0,0,1.25812753484717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,3.10497781055795,0.0675375846183947,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0.455324382702595,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,44.5632739668925,0.913158720509496,0.215927591218621,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.487671699929078,0,0,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,1.92579280054004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:12250342..12250347,+ | |||
}} |
Revision as of 22:59, 13 September 2013
Short description: | p@chr7:12250342..12250347, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:12250342..12250347, + |
Coexpression cluster: | C311_rectal_heart_choriocarcinoma_placenta_chorionic_lung_ductal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 2.32e-12 | 2 |
epithelial cell of prostate | 8.96e-09 | 3 |
intestinal epithelial cell | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 3.28e-23 | 1 |
extrahepatic bile duct | 3.28e-23 | 1 |
common bile duct | 3.28e-23 | 1 |
duodenal papilla | 3.28e-23 | 1 |
bile duct | 1.13e-15 | 6 |
digestive system duct | 1.13e-15 | 6 |
intestine | 8.91e-12 | 17 |
biliary system | 8.79e-11 | 9 |
biliary tree | 8.79e-11 | 9 |
biliary bud | 8.79e-11 | 9 |
duodenum | 1.21e-08 | 2 |
gastrointestinal system | 2.40e-08 | 25 |
gut epithelium | 6.01e-07 | 54 |
rectum | 6.50e-07 | 4 |
endo-epithelium | 6.77e-07 | 82 |
intestinal mucosa | 7.27e-07 | 4 |
wall of intestine | 7.27e-07 | 4 |
gastrointestinal system mucosa | 7.27e-07 | 4 |
gastrointestinal system epithelium | 7.27e-07 | 4 |
intestinal epithelium | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.59e-12 | 2 |
gastrointestinal system cancer | 2.68e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.