FFCP PHASE1:Mm9::chr2:21127346..21127408,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=208967|HGNC=|MCL_coexpression_id=60|UniProt=Q8BH55,A2AUG7,A2AUG4,A2AUG6,Q149D1|association_with_transcript=0bp_to_ENSMUST00000054591,ENSMUST00000102952,ENSMUST00000138914,ENSMUST00000138965,NM_001001297,NM_177588,uc008inb.1,uc008inc.1_5end|description=CAGE_peak_1_at_Thnsl1_5end|id=chr2:21127346..21127408,+|ontology_enrichment_celltype=CL:0000117!1.19e-08!23;CL:0000337!1.19e-08!23;CL:0000540!3.68e-07!33;CL:0000047!3.68e-07!33;CL:0000031!3.68e-07!33;CL:0000404!3.68e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-08,23;CL:0000337,1.19e-08,23;CL:0000540,3.68e-07,33;CL:0000047,3.68e-07,33;CL:0000031,3.68e-07,33;CL:0000404,3.68e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.42e-21!63;UBERON:0002346!5.45e-21!71;UBERON:0003075!5.45e-21!71;UBERON:0007284!5.45e-21!71;UBERON:0001049!2.63e-19!52;UBERON:0005068!2.63e-19!52;UBERON:0006241!2.63e-19!52;UBERON:0007135!2.63e-19!52;UBERON:0000955!9.91e-19!50;UBERON:0006238!9.91e-19!50;UBERON:0003056!2.02e-18!49;UBERON:0001017!3.42e-18!73;UBERON:0005743!3.42e-18!73;UBERON:0002616!3.53e-18!49;UBERON:0000073!5.78e-17!75;UBERON:0001016!5.78e-17!75;UBERON:0004121!7.21e-16!102;UBERON:0000924!7.21e-16!102;UBERON:0006601!7.21e-16!102;UBERON:0003080!8.41e-16!40;UBERON:0002780!3.77e-15!39;UBERON:0001890!3.77e-15!39;UBERON:0006240!3.77e-15!39;UBERON:0002020!4.16e-14!34;UBERON:0002791!7.87e-12!29;UBERON:0003528!7.87e-12!29;UBERON:0001893!7.87e-12!29;UBERON:0007811!9.91e-12!86;UBERON:0000025!2.37e-11!114;UBERON:0004111!4.95e-11!122;UBERON:0000153!2.32e-09!94;UBERON:0000956!2.35e-08!21;UBERON:0001869!2.35e-08!21;UBERON:0000203!2.35e-08!21;UBERON:0002619!2.01e-07!17;UBERON:0002021!2.34e-07!10;UBERON:0000411!2.34e-07!10;UBERON:0001950!2.34e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.86e-24,92;UBERON:0002346,1.92e-21,64;UBERON:0003075,1.92e-21,64;UBERON:0007284,1.92e-21,64;UBERON:0000073,1.17e-20,54;UBERON:0001049,2.59e-19,52;UBERON:0005068,2.59e-19,52;UBERON:0006241,2.59e-19,52;UBERON:0007135,2.59e-19,52;UBERON:0003056,2.01e-18,49;UBERON:0001017,3.37e-18,73;UBERON:0010371,1.46e-17,73;UBERON:0001016,5.69e-17,75;UBERON:0000955,7.55e-17,47;UBERON:0006238,7.55e-17,47;UBERON:0002616,2.60e-16,46;UBERON:0003080,8.41e-16,40;UBERON:0004121,1.10e-15,95;UBERON:0000924,1.10e-15,95;UBERON:0006601,1.10e-15,95;UBERON:0002780,3.77e-15,39;UBERON:0001890,3.77e-15,39;UBERON:0006240,3.77e-15,39;UBERON:0002020,4.16e-14,34;UBERON:0003528,7.87e-12,29;UBERON:0002791,7.87e-12,29;UBERON:0001893,7.87e-12,29;UBERON:0000025,2.35e-11,114;UBERON:0004111,4.90e-11,122;UBERON:0000956,2.35e-08,21;UBERON:0001869,2.35e-08,21;UBERON:0000203,2.35e-08,21;UBERON:0002619,2.01e-07,17;UBERON:0002021,2.34e-07,10;UBERON:0000411,2.34e-07,10;UBERON:0001950,2.34e-07,10|phase1_expression=11.8510146857548,4.53668029931169,1.81999695755814,6.0492842261366,3.50627010962443,3.69334398206158,5.84031601488814,6.71441281896197,5.77233760821834,6.08567768437183,3.76679530096111,4.22792442675283,10.9568467155972,7.08105259593879,1.66554880907831,1.61980213911861,2.09868563438444,5.8360500591274,3.83920414096069,5.51706547337439,17.9441342218757,9.53193131528499,10.7091913546964,3.19984845586813,6.65286915094793,2.29692785646008,1.7230479846363,2.80112602491656,3.99049180858385,2.01624103807945,3.32595765982957,4.44521471421742,2.46025915033828,31.6963362030877,6.06588401477677,7.97926297720763,7.35009682544529,0.418531630736908,1.5626706890476,1.0470474879476,11.1763982725893,1.36609096991689,1.45653105909346,4.90997590104751,4.76471576731718,4.40512205188036,0,5.23260375313072,4.17403747195497,6.02732687130279,3.3596741190087,4.31257693094915,5.87239121202077,5.07753499407941,3.6970317905671,1.54355661621568,2.86533439938757,4.64104883049698,7.08107613008592,6.87688273053643,8.87363964908651,3.04960078862219,0,1.3498495759221,0,0,2.99600110518405,4.99483796918021,7.25827286159344,7.1553147315796,6.94072372459561,11.7116903605559,8.39300455616131,7.96190194897201,5.55903731905771,11.0306254393203,29.731287869835,19.5361627270337,23.962619187974,8.17694983927202,7.593474419,8.33461392890816,15.0758819460746,26.449842671489,23.6837284054056,15.6153150301044,17.5117167382897,13.2343606535963,3.93776205332557,3.32514864469856,8.11620568364698,3.44169550792555,1.3599426674155,4.31762553310254,7.14754059192436,4.48026887097336,7.02222100658759,3.06774580640504,1.29893002301434,1.7666978725517,10.4224130634744,1.28326477414318,2.54805239706646,0,6.49473123033642,6.58735650235256,9.0994400102661,5.25245846707676,3.6251303710604,7.57054909230606,5.55153045651635,6.39377504455497,4.15107895060905,6.93324146542064,5.76184664964954,7.6656620711102,4.6967043869531,7.80836527367523,1.76922110389975,2.75003644910596,3.75430581382669,3.87900202508178,5.59175283654366,15.517382241612,11.9384622883669,3.57639877292028,3.83408398418945,0.599902730993408,2.28726408731516,26.6627338140584,20.1300265240196,14.9528679014309,28.8548371519179,30.6858548796397,22.0255327233134,23.2005006186893,5.90668310331835,4.35424397135326,5.81262344397452,4.41927897361595,8.97831056442656,12.644615743841,7.56260945182467,11.1521565198429,7.68812440410005,12.0426897067759,11.8064172945258,12.4177617954728,3.23351989399263,3.40390944302075,3.69497360744293,6.79506770525482,3.89266148915837,3.83077383174383,5.35033554660653,5.9710280045548,3.51106593656617,1.80143534980301,2.84163499395593,8.28503090142008,7.27030785941398,9.00310307305074,5.44512891845984,7.47704080640135,9.2560267732427,9.76642567951713,7.24338183778972,6.53885917256149,6.41783414662574,8.86504306027114,8.91756905004413,8.77199924551994,9.44065495751518,8.18659154438268,27.1274033647724,14.4066457330998,7.26921322564356,5.28901133327089,6.82522401712749,3.94802342162745,4.12375876230699,3.63030344322017,2.66853652613844,2.85338439168839,5.21981967698963,4.11747386810027,5.02670417600539,4.57599885694647,5.8489226135736,4.49409704327111,7.78096979548899,4.97853183135918,3.22435431620239,5.1411830674378,1.1270773567308,6.31319116320474,6.20647958936402,3.43665517462561,6.26041717530147,5.46157547524528,6.90794402502049,5.67626954040282,2.07516838961004,4.17112764290235,3.53806191203765,2.02375901146368,2.84004169943904,2.65294875727659,5.60176873919124,3.74004978686054,3.08056930872567,6.31491250332587,7.18841032636773,3.72140947668503,5.61667811606209,3.78868316920668,4.84373016509163,3.85954817090694,7.20537441649758,6.63219941196697,4.72598431681875,5.7713329163564,5.63256595892405,4.85768146581266,6.9032655856944,5.65887578787617,4.72905432318573,5.09368786192182,4.62418829106713,7.04612253277673,9.15230403889247,6.79850575333104,4.52373851817817,3.80733978673097,1.96705709207614,3.58717770196152,22.6376331882787,23.2079139452562,2.13115428989678,7.32165688892682,5.04813151066011,5.46614242015294,6.89354872744957,5.01834475700359,5.34716817797746,5.09537755419898,6.07216052512342,5.84511715822624,6.32460444714438,16.708708453934,7.80670468645477,5.1639025063504,5.70104357737516,9.56826713240706,2.65490276679926,4.37005145078967,7.55808892411878,3.58349651536206,1.47650946440386,7.07100840271033,4.13485269069154,6.90714086007261,6.06045543254026,6.32073515871632,6.32511651449993,2.06271086496374,19.4050575279659,11.7039711120352,5.43306471887569,8.78781843629528,10.995094485821,11.9507107793387,13.657568709976,6.39376393140658,0.938686832254841,6.99045833850607,3.30792597082443,3.13283880588812,3.06782410722221,5.12659861889325,5.49112782414428,2.79039529566604,4.66369338607761,20.5822085231666,2.39219233116994,2.68302928352189,2.22233432843654,2.44878994106098,1.91371918809435,3.20289442489132,6.96911562974807,5.17820373597535,5.38979897837253,3.81868247206045,5.852215881251,5.48962561242491,6.37231510848627,6.27264888043406,8.95286511359328,7.28267470478032,6.94289028092822,5.49687478166462,7.38805347763219,3.72803587852155,52.9871362363139,4.63501292736334,7.77654905148359,5.63908446197738,4.77891346867605,6.75824501963113,5.51579021635044,6.51021924219751,7.7595914875026,34.3049451572929,40.0361708698433,2.52808896502543,5.6763060281246,4.5192821152524,4.41730798124503,1.79026695667481,4.56967115996909,3.60586348559907,3.2491695978407,3.93769154797776,4.26758117267999,4.53717833115782,3.99577311032985,4.13710919053417,6.07759891344159,6.12172035761071,2.88581739386284,1.70456327558004,2.01461539636894,5.9888774149979,2.81523713176773,8.79127796482872,4.71610433973945,5.01572104035363,24.2843292325339,17.4923589872727,21.1971339972577,23.2001796163978,23.9778881919725,24.1726047164704,27.675922509504,23.4167025676595,24.469690085147,22.2636934053283,6.64239024538731,6.78342284781753,7.0000778359195,5.83456120963906,4.19226325255965,6.06683577885047,5.778414922842,3.91466608753899,7.70206103020357,5.55933865880354,6.08350319736575,6.41329560712659,7.11675456771106,6.6586158501064,6.03072424033939,7.62069906052918,6.60540657885676,7.13764115715709,6.1812885120496,6.62395140604788,4.4573002810104,7.27650805253284,7.15308569841963,3.48831399917588,7.0582035311498,7.10762706290083,6.76833499629258,6.57674278594607,5.43216455383447,6.17256498823512,6.8808310512021,6.2057823896605,6.54769669071503,6.66228417099654,4.62975866354739,8.24374907195222,4.91256377735358,5.80151845930405,3.25190164517034,4.85301122062934,6.02856372613096|short_description=p1@Thnsl1}} | ||
|EntrezGene=208967 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|UniProt=Q8BH55,A2AUG7,A2AUG4,A2AUG6,Q149D1 | |||
|association_with_transcript=0bp_to_ENSMUST00000054591,ENSMUST00000102952,ENSMUST00000138914,ENSMUST00000138965,NM_001001297,NM_177588,uc008inb.1,uc008inc.1_5end | |||
|description=CAGE_peak_1_at_Thnsl1_5end | |||
|id=chr2:21127346..21127408,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.19e-08!23;CL:0000337!1.19e-08!23;CL:0000540!3.68e-07!33;CL:0000047!3.68e-07!33;CL:0000031!3.68e-07!33;CL:0000404!3.68e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-08,23;CL:0000337,1.19e-08,23;CL:0000540,3.68e-07,33;CL:0000047,3.68e-07,33;CL:0000031,3.68e-07,33;CL:0000404,3.68e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.42e-21!63;UBERON:0002346!5.45e-21!71;UBERON:0003075!5.45e-21!71;UBERON:0007284!5.45e-21!71;UBERON:0001049!2.63e-19!52;UBERON:0005068!2.63e-19!52;UBERON:0006241!2.63e-19!52;UBERON:0007135!2.63e-19!52;UBERON:0000955!9.91e-19!50;UBERON:0006238!9.91e-19!50;UBERON:0003056!2.02e-18!49;UBERON:0001017!3.42e-18!73;UBERON:0005743!3.42e-18!73;UBERON:0002616!3.53e-18!49;UBERON:0000073!5.78e-17!75;UBERON:0001016!5.78e-17!75;UBERON:0004121!7.21e-16!102;UBERON:0000924!7.21e-16!102;UBERON:0006601!7.21e-16!102;UBERON:0003080!8.41e-16!40;UBERON:0002780!3.77e-15!39;UBERON:0001890!3.77e-15!39;UBERON:0006240!3.77e-15!39;UBERON:0002020!4.16e-14!34;UBERON:0002791!7.87e-12!29;UBERON:0003528!7.87e-12!29;UBERON:0001893!7.87e-12!29;UBERON:0007811!9.91e-12!86;UBERON:0000025!2.37e-11!114;UBERON:0004111!4.95e-11!122;UBERON:0000153!2.32e-09!94;UBERON:0000956!2.35e-08!21;UBERON:0001869!2.35e-08!21;UBERON:0000203!2.35e-08!21;UBERON:0002619!2.01e-07!17;UBERON:0002021!2.34e-07!10;UBERON:0000411!2.34e-07!10;UBERON:0001950!2.34e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.86e-24,92;UBERON:0002346,1.92e-21,64;UBERON:0003075,1.92e-21,64;UBERON:0007284,1.92e-21,64;UBERON:0000073,1.17e-20,54;UBERON:0001049,2.59e-19,52;UBERON:0005068,2.59e-19,52;UBERON:0006241,2.59e-19,52;UBERON:0007135,2.59e-19,52;UBERON:0003056,2.01e-18,49;UBERON:0001017,3.37e-18,73;UBERON:0010371,1.46e-17,73;UBERON:0001016,5.69e-17,75;UBERON:0000955,7.55e-17,47;UBERON:0006238,7.55e-17,47;UBERON:0002616,2.60e-16,46;UBERON:0003080,8.41e-16,40;UBERON:0004121,1.10e-15,95;UBERON:0000924,1.10e-15,95;UBERON:0006601,1.10e-15,95;UBERON:0002780,3.77e-15,39;UBERON:0001890,3.77e-15,39;UBERON:0006240,3.77e-15,39;UBERON:0002020,4.16e-14,34;UBERON:0003528,7.87e-12,29;UBERON:0002791,7.87e-12,29;UBERON:0001893,7.87e-12,29;UBERON:0000025,2.35e-11,114;UBERON:0004111,4.90e-11,122;UBERON:0000956,2.35e-08,21;UBERON:0001869,2.35e-08,21;UBERON:0000203,2.35e-08,21;UBERON:0002619,2.01e-07,17;UBERON:0002021,2.34e-07,10;UBERON:0000411,2.34e-07,10;UBERON:0001950,2.34e-07,10 | |||
|phase1_expression=11.8510146857548,4.53668029931169,1.81999695755814,6.0492842261366,3.50627010962443,3.69334398206158,5.84031601488814,6.71441281896197,5.77233760821834,6.08567768437183,3.76679530096111,4.22792442675283,10.9568467155972,7.08105259593879,1.66554880907831,1.61980213911861,2.09868563438444,5.8360500591274,3.83920414096069,5.51706547337439,17.9441342218757,9.53193131528499,10.7091913546964,3.19984845586813,6.65286915094793,2.29692785646008,1.7230479846363,2.80112602491656,3.99049180858385,2.01624103807945,3.32595765982957,4.44521471421742,2.46025915033828,31.6963362030877,6.06588401477677,7.97926297720763,7.35009682544529,0.418531630736908,1.5626706890476,1.0470474879476,11.1763982725893,1.36609096991689,1.45653105909346,4.90997590104751,4.76471576731718,4.40512205188036,0,5.23260375313072,4.17403747195497,6.02732687130279,3.3596741190087,4.31257693094915,5.87239121202077,5.07753499407941,3.6970317905671,1.54355661621568,2.86533439938757,4.64104883049698,7.08107613008592,6.87688273053643,8.87363964908651,3.04960078862219,0,1.3498495759221,0,0,2.99600110518405,4.99483796918021,7.25827286159344,7.1553147315796,6.94072372459561,11.7116903605559,8.39300455616131,7.96190194897201,5.55903731905771,11.0306254393203,29.731287869835,19.5361627270337,23.962619187974,8.17694983927202,7.593474419,8.33461392890816,15.0758819460746,26.449842671489,23.6837284054056,15.6153150301044,17.5117167382897,13.2343606535963,3.93776205332557,3.32514864469856,8.11620568364698,3.44169550792555,1.3599426674155,4.31762553310254,7.14754059192436,4.48026887097336,7.02222100658759,3.06774580640504,1.29893002301434,1.7666978725517,10.4224130634744,1.28326477414318,2.54805239706646,0,6.49473123033642,6.58735650235256,9.0994400102661,5.25245846707676,3.6251303710604,7.57054909230606,5.55153045651635,6.39377504455497,4.15107895060905,6.93324146542064,5.76184664964954,7.6656620711102,4.6967043869531,7.80836527367523,1.76922110389975,2.75003644910596,3.75430581382669,3.87900202508178,5.59175283654366,15.517382241612,11.9384622883669,3.57639877292028,3.83408398418945,0.599902730993408,2.28726408731516,26.6627338140584,20.1300265240196,14.9528679014309,28.8548371519179,30.6858548796397,22.0255327233134,23.2005006186893,5.90668310331835,4.35424397135326,5.81262344397452,4.41927897361595,8.97831056442656,12.644615743841,7.56260945182467,11.1521565198429,7.68812440410005,12.0426897067759,11.8064172945258,12.4177617954728,3.23351989399263,3.40390944302075,3.69497360744293,6.79506770525482,3.89266148915837,3.83077383174383,5.35033554660653,5.9710280045548,3.51106593656617,1.80143534980301,2.84163499395593,8.28503090142008,7.27030785941398,9.00310307305074,5.44512891845984,7.47704080640135,9.2560267732427,9.76642567951713,7.24338183778972,6.53885917256149,6.41783414662574,8.86504306027114,8.91756905004413,8.77199924551994,9.44065495751518,8.18659154438268,27.1274033647724,14.4066457330998,7.26921322564356,5.28901133327089,6.82522401712749,3.94802342162745,4.12375876230699,3.63030344322017,2.66853652613844,2.85338439168839,5.21981967698963,4.11747386810027,5.02670417600539,4.57599885694647,5.8489226135736,4.49409704327111,7.78096979548899,4.97853183135918,3.22435431620239,5.1411830674378,1.1270773567308,6.31319116320474,6.20647958936402,3.43665517462561,6.26041717530147,5.46157547524528,6.90794402502049,5.67626954040282,2.07516838961004,4.17112764290235,3.53806191203765,2.02375901146368,2.84004169943904,2.65294875727659,5.60176873919124,3.74004978686054,3.08056930872567,6.31491250332587,7.18841032636773,3.72140947668503,5.61667811606209,3.78868316920668,4.84373016509163,3.85954817090694,7.20537441649758,6.63219941196697,4.72598431681875,5.7713329163564,5.63256595892405,4.85768146581266,6.9032655856944,5.65887578787617,4.72905432318573,5.09368786192182,4.62418829106713,7.04612253277673,9.15230403889247,6.79850575333104,4.52373851817817,3.80733978673097,1.96705709207614,3.58717770196152,22.6376331882787,23.2079139452562,2.13115428989678,7.32165688892682,5.04813151066011,5.46614242015294,6.89354872744957,5.01834475700359,5.34716817797746,5.09537755419898,6.07216052512342,5.84511715822624,6.32460444714438,16.708708453934,7.80670468645477,5.1639025063504,5.70104357737516,9.56826713240706,2.65490276679926,4.37005145078967,7.55808892411878,3.58349651536206,1.47650946440386,7.07100840271033,4.13485269069154,6.90714086007261,6.06045543254026,6.32073515871632,6.32511651449993,2.06271086496374,19.4050575279659,11.7039711120352,5.43306471887569,8.78781843629528,10.995094485821,11.9507107793387,13.657568709976,6.39376393140658,0.938686832254841,6.99045833850607,3.30792597082443,3.13283880588812,3.06782410722221,5.12659861889325,5.49112782414428,2.79039529566604,4.66369338607761,20.5822085231666,2.39219233116994,2.68302928352189,2.22233432843654,2.44878994106098,1.91371918809435,3.20289442489132,6.96911562974807,5.17820373597535,5.38979897837253,3.81868247206045,5.852215881251,5.48962561242491,6.37231510848627,6.27264888043406,8.95286511359328,7.282674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| |||
|short_description=p1@Thnsl1 | |||
}} |
Revision as of 23:20, 13 September 2013
Short description: | p1@Thnsl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Thnsl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000054591, ENSMUST00000102952, ENSMUST00000138914, ENSMUST00000138965, NM_001001297, NM_177588, uc008inb.1, uc008inc.1_5end |
EntrezGene: | Thnsl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.19e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.19e-08 | 23 |
neuron | 3.68e-07 | 33 |
neuronal stem cell | 3.68e-07 | 33 |
neuroblast | 3.68e-07 | 33 |
electrically signaling cell | 3.68e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.