FFCP PHASE1:Hg19::chr7:145813326..145813335,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26047|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13830|TSSclassifier=S|UniProt=Q9UHC6,B2RCH4|association_with_transcript=-117bp_to_ENST00000361727,NM_014141,uc003weu.1_5end|description=CAGE_peak_23_at_CNTNAP2_5end|id=chr7:145813326..145813335,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002553;3.58e-26;1|ontology_enrichment_celltype_v019_2=CL:0002553,3.58e-26,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:154;1.29e-13;2!DOID:4236;1.29e-13;2|ontology_enrichment_disease_v019_2=DOID:154,1.07e-13,2;DOID:4236,1.07e-13,2|ontology_enrichment_uberon=UBERON:0001049!1.79e-60!57;UBERON:0005068!1.79e-60!57;UBERON:0006241!1.79e-60!57;UBERON:0007135!1.79e-60!57;UBERON:0002616!3.56e-58!59;UBERON:0002780!4.63e-53!41;UBERON:0001890!4.63e-53!41;UBERON:0006240!4.63e-53!41;UBERON:0003080!1.15e-51!42;UBERON:0000955!3.63e-51!69;UBERON:0006238!3.63e-51!69;UBERON:0001017!1.07e-50!82;UBERON:0002020!1.78e-49!34;UBERON:0003528!1.78e-49!34;UBERON:0001869!1.27e-48!32;UBERON:0005743!5.69e-48!86;UBERON:0001950!5.01e-47!20;UBERON:0001893!1.65e-45!34;UBERON:0000073!3.30e-45!94;UBERON:0001016!3.30e-45!94;UBERON:0002791!1.26e-42!33;UBERON:0003075!1.42e-42!86;UBERON:0007284!1.42e-42!86;UBERON:0002619!1.49e-42!22;UBERON:0002346!2.57e-40!90;UBERON:0000956!3.93e-37!25;UBERON:0000203!3.93e-37!25;UBERON:0003056!1.03e-33!61;UBERON:0000153!7.82e-31!129;UBERON:0007811!7.82e-31!129;UBERON:0000033!8.57e-31!123;UBERON:0007023!9.84e-28!115;UBERON:0004121!3.14e-24!169;UBERON:0000924!1.84e-23!173;UBERON:0006601!1.84e-23!173;UBERON:0001871!5.15e-22!7;UBERON:0000200!5.60e-15!6;UBERON:0000025!2.58e-14!194;UBERON:0002420!3.64e-14!9;UBERON:0007245!3.64e-14!9;UBERON:0010009!3.64e-14!9;UBERON:0010011!3.64e-14!9;UBERON:0000454!3.64e-14!9;UBERON:0002308!1.49e-13!9;UBERON:0000125!1.49e-13!9;UBERON:0004733!2.78e-13!12;UBERON:0002028!2.78e-13!12;UBERON:0007277!2.78e-13!12;UBERON:0001872!2.63e-12!5;UBERON:0004732!3.47e-12!13;UBERON:0002021!6.05e-12!5;UBERON:0004111!1.46e-11!241;UBERON:0002771!1.64e-11!3;UBERON:0000988!1.06e-10!3;UBERON:0002298!1.43e-10!8;UBERON:0003076!1.97e-10!15;UBERON:0003057!1.97e-10!15;UBERON:0000477!7.42e-10!286;UBERON:0000064!8.76e-10!219;UBERON:0000475!1.44e-09!365;UBERON:0002680!2.21e-09!9;UBERON:0001895!2.21e-09!9;UBERON:0010092!2.21e-09!9;UBERON:0000483!3.75e-09!309;UBERON:0000481!4.24e-09!347;UBERON:0000119!5.59e-09!312;UBERON:0001894!8.08e-09!7;UBERON:0006222!8.08e-09!7;UBERON:0001905!8.23e-09!2;UBERON:0002757!8.23e-09!2;UBERON:0010134!8.23e-09!2;UBERON:0002784!8.23e-09!2;UBERON:0005408!8.23e-09!2;UBERON:0001899!8.23e-09!2;UBERON:0000369!1.08e-08!4;UBERON:0002435!1.08e-08!4;UBERON:0000204!1.08e-08!4;UBERON:0010082!1.08e-08!4;UBERON:0001876!1.67e-08!2;UBERON:0009663!1.76e-08!7;UBERON:0002148!1.48e-07!2;UBERON:0009662!1.48e-07!2;UBERON:0000349!3.19e-07!5|ontology_enrichment_uberon_v019=UBERON:0001872;9.44e-21;5!UBERON:0001905;8.28e-14;2!UBERON:0002757;8.28e-14;2!UBERON:0010134;8.28e-14;2!UBERON:0005408;8.28e-14;2!UBERON:0001899;8.28e-14;2!UBERON:0001950;2.30e-11;20!UBERON:0002619;1.96e-10;22!UBERON:0002114;1.60e-09;2!UBERON:0000956;2.63e-09;25!UBERON:0000203;2.63e-09;25!UBERON:0002780;4.38e-08;41!UBERON:0001890;4.38e-08;41!UBERON:0003296;1.49e-07;4!UBERON:0010133;1.49e-07;4!UBERON:0002784;1.49e-07;4!UBERON:0002791;4.00e-07;32!UBERON:0003528;5.74e-07;34!UBERON:0002020;5.74e-07;34!UBERON:0001869;5.77e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0001872,1.10e-20,5;UBERON:0001905,7.30e-14,2;UBERON:0002757,7.30e-14,2;UBERON:0010134,7.30e-14,2;UBERON:0005408,7.30e-14,2;UBERON:0001899,7.30e-14,2;UBERON:0001950,2.43e-11,20;UBERON:0002619,2.05e-10,22;UBERON:0002780,6.28e-10,41;UBERON:0001890,6.28e-10,41;UBERON:0003080,6.28e-10,41;UBERON:0006240,6.28e-10,41;UBERON:0002114,1.54e-09,2;UBERON:0000956,2.75e-09,25;UBERON:0000203,2.75e-09,25;UBERON:0000073,8.31e-08,53;UBERON:0002616,8.31e-08,53;UBERON:0003296,1.40e-07,4;UBERON:0010133,1.40e-07,4;UBERON:0002784,1.40e-07,4;UBERON:0002791,1.90e-07,32;UBERON:0001869,1.90e-07,32;UBERON:0001049,2.05e-07,56;UBERON:0005068,2.05e-07,56;UBERON:0006241,2.05e-07,56;UBERON:0007135,2.05e-07,56;UBERON:0003528,4.68e-07,34;UBERON:0002020,4.68e-07,34;UBERON:0001893,4.68e-07,34;UBERON:0003056,7.64e-07,61|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8715334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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26047 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13830 | |||
|TSSclassifier=S | |||
|UniProt=Q9UHC6,B2RCH4 | |||
|association_with_transcript=-117bp_to_ENST00000361727,NM_014141,uc003weu.1_5end | |||
|description=CAGE_peak_23_at_CNTNAP2_5end | |||
|id=chr7:145813326..145813335,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;3.58e-26;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.58e-26,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;1.29e-13;2!DOID:4236;1.29e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,1.07e-13,2;DOID:4236,1.07e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.79e-60!57;UBERON:0005068!1.79e-60!57;UBERON:0006241!1.79e-60!57;UBERON:0007135!1.79e-60!57;UBERON:0002616!3.56e-58!59;UBERON:0002780!4.63e-53!41;UBERON:0001890!4.63e-53!41;UBERON:0006240!4.63e-53!41;UBERON:0003080!1.15e-51!42;UBERON:0000955!3.63e-51!69;UBERON:0006238!3.63e-51!69;UBERON:0001017!1.07e-50!82;UBERON:0002020!1.78e-49!34;UBERON:0003528!1.78e-49!34;UBERON:0001869!1.27e-48!32;UBERON:0005743!5.69e-48!86;UBERON:0001950!5.01e-47!20;UBERON:0001893!1.65e-45!34;UBERON:0000073!3.30e-45!94;UBERON:0001016!3.30e-45!94;UBERON:0002791!1.26e-42!33;UBERON:0003075!1.42e-42!86;UBERON:0007284!1.42e-42!86;UBERON:0002619!1.49e-42!22;UBERON:0002346!2.57e-40!90;UBERON:0000956!3.93e-37!25;UBERON:0000203!3.93e-37!25;UBERON:0003056!1.03e-33!61;UBERON:0000153!7.82e-31!129;UBERON:0007811!7.82e-31!129;UBERON:0000033!8.57e-31!123;UBERON:0007023!9.84e-28!115;UBERON:0004121!3.14e-24!169;UBERON:0000924!1.84e-23!173;UBERON:0006601!1.84e-23!173;UBERON:0001871!5.15e-22!7;UBERON:0000200!5.60e-15!6;UBERON:0000025!2.58e-14!194;UBERON:0002420!3.64e-14!9;UBERON:0007245!3.64e-14!9;UBERON:0010009!3.64e-14!9;UBERON:0010011!3.64e-14!9;UBERON:0000454!3.64e-14!9;UBERON:0002308!1.49e-13!9;UBERON:0000125!1.49e-13!9;UBERON:0004733!2.78e-13!12;UBERON:0002028!2.78e-13!12;UBERON:0007277!2.78e-13!12;UBERON:0001872!2.63e-12!5;UBERON:0004732!3.47e-12!13;UBERON:0002021!6.05e-12!5;UBERON:0004111!1.46e-11!241;UBERON:0002771!1.64e-11!3;UBERON:0000988!1.06e-10!3;UBERON:0002298!1.43e-10!8;UBERON:0003076!1.97e-10!15;UBERON:0003057!1.97e-10!15;UBERON:0000477!7.42e-10!286;UBERON:0000064!8.76e-10!219;UBERON:0000475!1.44e-09!365;UBERON:0002680!2.21e-09!9;UBERON:0001895!2.21e-09!9;UBERON:0010092!2.21e-09!9;UBERON:0000483!3.75e-09!309;UBERON:0000481!4.24e-09!347;UBERON:0000119!5.59e-09!312;UBERON:0001894!8.08e-09!7;UBERON:0006222!8.08e-09!7;UBERON:0001905!8.23e-09!2;UBERON:0002757!8.23e-09!2;UBERON:0010134!8.23e-09!2;UBERON:0002784!8.23e-09!2;UBERON:0005408!8.23e-09!2;UBERON:0001899!8.23e-09!2;UBERON:0000369!1.08e-08!4;UBERON:0002435!1.08e-08!4;UBERON:0000204!1.08e-08!4;UBERON:0010082!1.08e-08!4;UBERON:0001876!1.67e-08!2;UBERON:0009663!1.76e-08!7;UBERON:0002148!1.48e-07!2;UBERON:0009662!1.48e-07!2;UBERON:0000349!3.19e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001872;9.44e-21;5!UBERON:0001905;8.28e-14;2!UBERON:0002757;8.28e-14;2!UBERON:0010134;8.28e-14;2!UBERON:0005408;8.28e-14;2!UBERON:0001899;8.28e-14;2!UBERON:0001950;2.30e-11;20!UBERON:0002619;1.96e-10;22!UBERON:0002114;1.60e-09;2!UBERON:0000956;2.63e-09;25!UBERON:0000203;2.63e-09;25!UBERON:0002780;4.38e-08;41!UBERON:0001890;4.38e-08;41!UBERON:0003296;1.49e-07;4!UBERON:0010133;1.49e-07;4!UBERON:0002784;1.49e-07;4!UBERON:0002791;4.00e-07;32!UBERON:0003528;5.74e-07;34!UBERON:0002020;5.74e-07;34!UBERON:0001869;5.77e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,1.10e-20,5;UBERON:0001905,7.30e-14,2;UBERON:0002757,7.30e-14,2;UBERON:0010134,7.30e-14,2;UBERON:0005408,7.30e-14,2;UBERON:0001899,7.30e-14,2;UBERON:0001950,2.43e-11,20;UBERON:0002619,2.05e-10,22;UBERON:0002780,6.28e-10,41;UBERON:0001890,6.28e-10,41;UBERON:0003080,6.28e-10,41;UBERON:0006240,6.28e-10,41;UBERON:0002114,1.54e-09,2;UBERON:0000956,2.75e-09,25;UBERON:0000203,2.75e-09,25;UBERON:0000073,8.31e-08,53;UBERON:0002616,8.31e-08,53;UBERON:0003296,1.40e-07,4;UBERON:0010133,1.40e-07,4;UBERON:0002784,1.40e-07,4;UBERON:0002791,1.90e-07,32;UBERON:0001869,1.90e-07,32;UBERON:0001049,2.05e-07,56;UBERON:0005068,2.05e-07,56;UBERON:0006241,2.05e-07,56;UBERON:0007135,2.05e-07,56;UBERON:0003528,4.68e-07,34;UBERON:0002020,4.68e-07,34;UBERON:0001893,4.68e-07,34;UBERON:0003056,7.64e-07,61 | |||
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|short_description=p23@CNTNAP2 | |||
}} |
Revision as of 23:48, 13 September 2013
Short description: | p23@CNTNAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_CNTNAP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -117bp_to_ENST00000361727, NM_014141, uc003weu.1_5end |
EntrezGene: | CNTNAP2 |
HGNC: | 13830 |
UniProt: | Q9UHC6B2RCH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.58e-26 | 1 |
Ontology term | p-value | n |
---|---|---|
parietal lobe | 1.10e-20 | 5 |
pineal body | 7.30e-14 | 2 |
regional part of epithalamus | 7.30e-14 | 2 |
secretory circumventricular organ | 7.30e-14 | 2 |
circumventricular organ | 7.30e-14 | 2 |
epithalamus | 7.30e-14 | 2 |
neocortex | 2.43e-11 | 20 |
regional part of cerebral cortex | 2.05e-10 | 22 |
regional part of forebrain | 6.28e-10 | 41 |
forebrain | 6.28e-10 | 41 |
anterior neural tube | 6.28e-10 | 41 |
future forebrain | 6.28e-10 | 41 |
duodenum | 1.54e-09 | 2 |
cerebral cortex | 2.75e-09 | 25 |
pallium | 2.75e-09 | 25 |
regional part of nervous system | 8.31e-08 | 53 |
regional part of brain | 8.31e-08 | 53 |
gland of diencephalon | 1.40e-07 | 4 |
neuroendocrine gland | 1.40e-07 | 4 |
regional part of diencephalon | 1.40e-07 | 4 |
regional part of telencephalon | 1.90e-07 | 32 |
cerebral hemisphere | 1.90e-07 | 32 |
neural tube | 2.05e-07 | 56 |
neural rod | 2.05e-07 | 56 |
future spinal cord | 2.05e-07 | 56 |
neural keel | 2.05e-07 | 56 |
brain grey matter | 4.68e-07 | 34 |
gray matter | 4.68e-07 | 34 |
telencephalon | 4.68e-07 | 34 |
pre-chordal neural plate | 7.64e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 1.07e-13 | 2 |
carcinosarcoma | 1.07e-13 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.