FFCP PHASE1:Hg19::chr7:21467746..21467758,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6671|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11209|TSSclassifier=S|UniProt=|association_with_transcript=-54bp_to_ENST00000440636_5end|description=CAGE_peak_4_at_SP4_5end|id=chr7:21467746..21467758,+|ontology_enrichment_celltype=CL:0000542!1.49e-15!53;CL:0000051!1.49e-15!53;CL:0000838!3.89e-15!52;CL:0000738!7.18e-14!140;CL:0000037!1.64e-13!172;CL:0000566!1.64e-13!172;CL:0002032!6.30e-13!165;CL:0000837!6.30e-13!165;CL:0000988!2.62e-12!182;CL:0002031!5.13e-11!124;CL:0002087!2.55e-09!119;CL:0000791!3.67e-08!18;CL:0000789!3.67e-08!18;CL:0002420!3.67e-08!18;CL:0002419!3.67e-08!18;CL:0000790!3.67e-08!18;CL:0000945!7.29e-08!24;CL:0000826!7.29e-08!24;CL:0000084!3.54e-07!25;CL:0000827!3.54e-07!25|ontology_enrichment_celltype_v019=CL:0000791;2.36e-13;18!CL:0000789;2.36e-13;18!CL:0002419;2.36e-13;18!CL:0000625;4.42e-13;11!CL:0000542;5.35e-13;53!CL:0000084;8.69e-13;25!CL:0000097;2.72e-07;5!CL:0000945;4.31e-07;24|ontology_enrichment_celltype_v019_2=CL:0000542,8.24e-22,53;CL:0000051,8.24e-22,53;CL:0000838,5.36e-21,52;CL:0000738,6.47e-18,136;CL:0000037,7.88e-15,168;CL:0002031,7.59e-14,120;CL:0000988,8.41e-14,177;CL:0000625,2.47e-13,11;CL:0002032,2.59e-13,161;CL:0000837,2.59e-13,161;CL:0000791,2.71e-13,18;CL:0000789,2.71e-13,18;CL:0002420,2.71e-13,18;CL:0002419,2.71e-13,18;CL:0000790,2.71e-13,18;CL:0000084,1.83e-12,25;CL:0000827,1.83e-12,25;CL:0002087,1.79e-11,115;CL:0000945,2.33e-07,24;CL:0000826,2.33e-07,24;CL:0000097,3.18e-07,5;CL:0002028,3.18e-07,5|ontology_enrichment_development_v019=CL:0000790;2.36e-13;18!CL:0000051;5.35e-13;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.76e-15!115;UBERON:0000178!1.46e-07!15;UBERON:0000179!1.46e-07!15;UBERON:0000463!1.46e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;5.79e-11;15!UBERON:0000179;5.79e-11;15!UBERON:0000463;5.79e-11;15!UBERON:0002390;1.94e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.77e-11,15;UBERON:0000179,3.77e-11,15;UBERON:0000463,3.77e-11,15|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,1.14494394852423,0.410623275218653,0.627713197974014,1.29902789771517,0.821005894499457,1.65292640758726,1.57345710739562,0.767658796194425,0.77408061658038,0.919421224478927,0.30120591877825,0.739508020333575,1.16200800870452,0.284338464974843,0,0,1.20326668482085,1.51907609501096,0.223915474239924,0.971680998056939,0.77272670290256,0.726991193897824,1.13362783106643,0.242584061187816,0,1.23350366406548,0.309706370895104,0,0.256160706529101,0.709446689665756,0.344745680736619,0.645484683583826,0,0,1.09162460023138,0.449446968890169,0.612167784741805,0,0,0.329851300186716,0.199463657621632,1.27867425159808,0.290209238628584,0,0.622822248995575,0.75374599577023,0.521482918420201,0.868755378820466,0.605399502633369,0.368277635987565,1.26584954976354,0.422510572623884,1.06302149982522,0.209658645508376,0.336985893439485,0.300353785683013,0.964353520182481,0.855038231223746,0.59675003159727,0.182664153764634,3.51992488922645,1.63841583378639,0.889509253863555,0.853460445133014,0.400395987036012,2.87376219977242,2.64417949113945,2.86216126360609,2.84606484554724,2.34894875748376,0.764546456250458,0,1.68152568894461,0.526768169550154,0.393419540227666,0.786021525498329,2.05601498999509,4.84840836632966,0.977766799900771,2.36723902867367,0,3.34231370655521,1.76763544484902,2.21533894583621,1.89562704635511,1.79327847615945,1.69077151827842,1.47994114143309,1.10540007114339,2.31842468588042,1.63115219478266,1.33770414044857,0,3.39928028092699,1.14966148080576,1.71813722741315,2.27717722817553,3.18565414324097,0,2.85135613334512,4.06552821509986,3.58362511232371,4.99722906209383,1.65744076430812,4.92676798152628,2.21767417547206,2.67440195783507,2.60683926989038,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,1.45990461090791,0.378139268656271,0.443458794925128,0.263504357079378,0.392937226493138,0.364295288292542,0.370784442784429,0.324547393654683,0.174129737299267,0.132957960518865,0.238490624305342,0.571994910780128,1.11437250398869,0,0,0.694281003215189,0,0,0.275118041940067,0.208994966536811,0,0.35576626268671,1.33888245105868,0,0,0,0.367663080345869,0,0.803697554556718,0.898117490504679,0.675668882899933,0,0,0.732806975721629,7.9068250461638,0,0,0.496971951695318,0.12663051166458,0.397227542439656,0.286836620748814,0,0,0,0,0.311211035399766,0.269421344139376,0,0,0,0.468642863667593,0.312160076830321,0.570471821544449,0.298897361103602,0.469737994575059,0.971237666208789,0.702254033511242,0,0.122834317311768,0.309977343527296,0,0.247266929278557,0,0,0,0.500474079487857,0.277064115484183,0.438977620880838,0.612975591598039,0,0,0.538168907066586,0.427114777637135,0.211931901159562,0.600182192168805,0.515262646192195,0.515281080091258,0.18611685633159,0.506328996723799,0.584622030967192,0.252433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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6671 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11209 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-54bp_to_ENST00000440636_5end | |||
|description=CAGE_peak_4_at_SP4_5end | |||
|id=chr7:21467746..21467758,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.49e-15!53;CL:0000051!1.49e-15!53;CL:0000838!3.89e-15!52;CL:0000738!7.18e-14!140;CL:0000037!1.64e-13!172;CL:0000566!1.64e-13!172;CL:0002032!6.30e-13!165;CL:0000837!6.30e-13!165;CL:0000988!2.62e-12!182;CL:0002031!5.13e-11!124;CL:0002087!2.55e-09!119;CL:0000791!3.67e-08!18;CL:0000789!3.67e-08!18;CL:0002420!3.67e-08!18;CL:0002419!3.67e-08!18;CL:0000790!3.67e-08!18;CL:0000945!7.29e-08!24;CL:0000826!7.29e-08!24;CL:0000084!3.54e-07!25;CL:0000827!3.54e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.36e-13;18!CL:0000789;2.36e-13;18!CL:0002419;2.36e-13;18!CL:0000625;4.42e-13;11!CL:0000542;5.35e-13;53!CL:0000084;8.69e-13;25!CL:0000097;2.72e-07;5!CL:0000945;4.31e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.24e-22,53;CL:0000051,8.24e-22,53;CL:0000838,5.36e-21,52;CL:0000738,6.47e-18,136;CL:0000037,7.88e-15,168;CL:0002031,7.59e-14,120;CL:0000988,8.41e-14,177;CL:0000625,2.47e-13,11;CL:0002032,2.59e-13,161;CL:0000837,2.59e-13,161;CL:0000791,2.71e-13,18;CL:0000789,2.71e-13,18;CL:0002420,2.71e-13,18;CL:0002419,2.71e-13,18;CL:0000790,2.71e-13,18;CL:0000084,1.83e-12,25;CL:0000827,1.83e-12,25;CL:0002087,1.79e-11,115;CL:0000945,2.33e-07,24;CL:0000826,2.33e-07,24;CL:0000097,3.18e-07,5;CL:0002028,3.18e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;2.36e-13;18!CL:0000051;5.35e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.76e-15!115;UBERON:0000178!1.46e-07!15;UBERON:0000179!1.46e-07!15;UBERON:0000463!1.46e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.79e-11;15!UBERON:0000179;5.79e-11;15!UBERON:0000463;5.79e-11;15!UBERON:0002390;1.94e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.77e-11,15;UBERON:0000179,3.77e-11,15;UBERON:0000463,3.77e-11,15 | |||
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| |||
|short_description=p4@SP4 | |||
}} |
Revision as of 00:29, 14 September 2013
Short description: | p4@SP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SP4_5end |
Coexpression cluster: | NA |
Association with transcript: | -54bp_to_ENST00000440636_5end |
EntrezGene: | SP4 |
HGNC: | 11209 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.24e-22 | 53 |
common lymphoid progenitor | 8.24e-22 | 53 |
lymphoid lineage restricted progenitor cell | 5.36e-21 | 52 |
leukocyte | 6.47e-18 | 136 |
hematopoietic stem cell | 7.88e-15 | 168 |
hematopoietic lineage restricted progenitor cell | 7.59e-14 | 120 |
hematopoietic cell | 8.41e-14 | 177 |
CD8-positive, alpha-beta T cell | 2.47e-13 | 11 |
hematopoietic oligopotent progenitor cell | 2.59e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.59e-13 | 161 |
mature alpha-beta T cell | 2.71e-13 | 18 |
alpha-beta T cell | 2.71e-13 | 18 |
immature T cell | 2.71e-13 | 18 |
mature T cell | 2.71e-13 | 18 |
immature alpha-beta T cell | 2.71e-13 | 18 |
T cell | 1.83e-12 | 25 |
pro-T cell | 1.83e-12 | 25 |
nongranular leukocyte | 1.79e-11 | 115 |
lymphocyte of B lineage | 2.33e-07 | 24 |
pro-B cell | 2.33e-07 | 24 |
mast cell | 3.18e-07 | 5 |
basophil mast progenitor cell | 3.18e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
blood | 3.77e-11 | 15 |
haemolymphatic fluid | 3.77e-11 | 15 |
organism substance | 3.77e-11 | 15 |
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