FFCP PHASE1:Mm9::chr2:90910337..90910406,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68427|HGNC=|MCL_coexpression_id=564|UniProt=Q8BZH0,B7ZCF3,B2RQ45|association_with_transcript=0bp_to_ENSMUST00000079976,ENSMUST00000111434,ENSMUST00000130252,ENSMUST00000133047,ENSMUST00000153367,NM_026721,uc008kug.1,uc008kuh.1,uc008kui.1_5end|description=CAGE_peak_1_at_Slc39a13_5end|id=chr2:90910337..90910406,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!8.31e-08!23;UBERON:0001009!8.31e-08!23;UBERON:0004872!4.92e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0004535,8.28e-08,23;UBERON:0001009,8.28e-08,23;UBERON:0004872,4.91e-07,33|phase1_expression=9.44878197918284,0.697950815278722,0.909998478779072,0,0,1.00727563147134,1.40167584357315,6.06879620175408,3.09735188733667,2.57470978954193,1.36974374580404,1.51567102091139,1.54080656938085,2.88487327982691,3.99731714178795,3.44207954562704,1.39912375625629,2.68142840554502,2.60517423850904,2.54633791078818,11.0556277196391,2.58156473122302,1.56719873483361,1.11994695955385,0.68822784320151,0,0.86152399231815,0.646413698057667,0.950117097281869,0.504060259519861,0.886922042621219,1.90509202037889,3.69038872550742,0,0,1.16364251750945,1.22501613757421,0.418531630736908,0.7813353445238,0.523523743973798,0.588231488031014,0,1.45653105909346,56.6535680890098,55.8586891019525,51.5766373574325,36.7723931843578,54.7243142514921,76.2311054088617,68.8281842722963,30.3770534927037,44.5632949531412,2.18117387875057,2.90144856804538,1.68046899571232,63.028561828807,51.0029523090987,65.4903557192352,2.63011399117477,4.7609188134483,1.90149421051854,33.2067641427749,24.9002542911119,40.9454371363037,28.6771245144423,36.2344858622511,29.0612107202853,40.7271403640848,0.829516898467821,1.62007125998029,1.26194976810829,9.42648248532552,8.1721360152097,0.857435594504678,1.91690942036473,2.75765635983006,7.70811166995721,5.74593021383345,4.30098293117482,1.84640802822271,1.37231465403614,3.12548022334056,5.58365998002762,4.50210088025344,7.02871939773326,4.71405736757868,4.55589378557129,2.79599168737951,18.6286435599633,13.1494514585807,7.53647670624362,4.30211938490693,4.0798280022465,3.2382191498269,0.649776417447669,3.58421509677868,10.5333315098814,42.4371503219364,24.6796704372725,30.3872034078893,7.88723150749411,30.7983545794363,45.8649431471962,21.3320010945999,9.95858788651585,10.1343946190039,10.1104889002957,5.82337786567206,5.69663344023778,15.7348667408714,8.32729568477452,8.8294988710521,10.3776973765226,6.48107354376277,9.99504010653491,9.42499434972566,17.0564527736718,15.0383331196708,10.6153266233985,37.2063754879041,27.1635067706284,21.3345111379498,5.59175283654366,2.92780797011547,2.72280718857492,2.29911349687732,3.47463861067169,0.599902730993408,2.28726408731516,4.94309110035915,5.03250663100489,2.26177833803156,3.65031072403781,3.83573185995496,7.48036960414416,5.84068547043927,19.5531578592607,24.6325801807984,7.32895999457657,4.8401626853889,4.68433594665733,6.43725892413724,8.46292010085141,10.3986324306643,12.3146063463903,9.22418786050918,9.46387418053261,11.6416516832557,3.66465587985832,8.50977360755187,15.6596500505914,20.604398848192,16.9608822027615,35.1734688187388,30.2499740519677,8.55847347319521,1.40442637462647,2.57347907114715,2.55747149456033,10.7705401718461,8.91199027928165,13.3245925481151,15.1516630774535,16.1346670032871,19.7461904495844,19.3003174142839,25.4859731329638,16.8142093008724,21.7219001885794,15.595909087514,16.7001747664463,16.6667985664879,14.0512073786272,12.8838162009957,8.20130799400096,2.36680608472354,0.660837565967596,3.43785736662608,5.54549451391608,10.4506502337197,10.9537342123779,6.85723983719365,7.56085349072559,5.70676878337677,5.69434873853414,5.27036655116835,6.03204501120647,4.77495532898762,7.40863531052657,4.49409704327111,4.32276099749388,4.18196673834171,5.87970492954553,6.740662243974,11.270773567308,8.14605311381257,12.8008641530633,11.5724102819026,13.7223285559638,14.7610147979602,18.9968460688064,18.3861774243483,2.37162101669719,4.33797274861845,5.11053387294328,6.74586337154561,6.49152388443209,6.27060615356284,5.60176873919124,6.61701116136864,5.35046248357617,3.84385978463314,7.18841032636773,5.58211421502755,3.12037673114561,5.30415643688935,2.87035861635059,2.41221760681684,21.6161232494927,7.01118223550794,7.49638891633319,8.65699937453459,7.27539769694356,6.86775655511445,13.8065311713888,19.3182311379221,18.9162172927429,17.4957104822532,27.2667654404303,18.8442811923099,21.0675677876393,17.7918342055259,0,11.4220193601929,5.4094070032094,4.41498794087572,8.34863067936518,5.15731421005694,19.0164536636943,14.3908428506493,6.31016438832513,7.41833614163613,7.53981892064796,5.01834475700359,9.35754431146055,6.51076020814315,5.66734982344852,9.64444331107329,13.8350722281283,5.14114106274891,15.4714692877013,15.4917075190512,13.3567306669932,13.1976098378028,10.619611067197,6.5550771761845,6.95344181018927,8.86443874852721,13.8791889653963,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| ||
|EntrezGene=68427 | |||
|HGNC= | |||
|MCL_coexpression_id=564 | |||
|UniProt=Q8BZH0,B7ZCF3,B2RQ45 | |||
|association_with_transcript=0bp_to_ENSMUST00000079976,ENSMUST00000111434,ENSMUST00000130252,ENSMUST00000133047,ENSMUST00000153367,NM_026721,uc008kug.1,uc008kuh.1,uc008kui.1_5end | |||
|description=CAGE_peak_1_at_Slc39a13_5end | |||
|id=chr2:90910337..90910406,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!8.31e-08!23;UBERON:0001009!8.31e-08!23;UBERON:0004872!4.92e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,8.28e-08,23;UBERON:0001009,8.28e-08,23;UBERON:0004872,4.91e-07,33 | |||
|phase1_expression=9.44878197918284,0.697950815278722,0.909998478779072,0,0,1.00727563147134,1.40167584357315,6.06879620175408,3.09735188733667,2.57470978954193,1.36974374580404,1.51567102091139,1.54080656938085,2.88487327982691,3.99731714178795,3.44207954562704,1.39912375625629,2.68142840554502,2.60517423850904,2.54633791078818,11.0556277196391,2.58156473122302,1.56719873483361,1.11994695955385,0.68822784320151,0,0.86152399231815,0.646413698057667,0.950117097281869,0.504060259519861,0.886922042621219,1.90509202037889,3.69038872550742,0,0,1.16364251750945,1.22501613757421,0.418531630736908,0.7813353445238,0.523523743973798,0.588231488031014,0,1.45653105909346,56.6535680890098,55.8586891019525,51.5766373574325,36.7723931843578,54.7243142514921,76.2311054088617,68.8281842722963,30.3770534927037,44.5632949531412,2.18117387875057,2.90144856804538,1.68046899571232,63.028561828807,51.0029523090987,65.4903557192352,2.63011399117477,4.7609188134483,1.90149421051854,33.2067641427749,24.9002542911119,40.9454371363037,28.6771245144423,36.2344858622511,29.0612107202853,40.7271403640848,0.829516898467821,1.62007125998029,1.26194976810829,9.42648248532552,8.1721360152097,0.857435594504678,1.91690942036473,2.75765635983006,7.70811166995721,5.74593021383345,4.30098293117482,1.84640802822271,1.37231465403614,3.12548022334056,5.58365998002762,4.50210088025344,7.02871939773326,4.71405736757868,4.55589378557129,2.79599168737951,18.6286435599633,13.1494514585807,7.53647670624362,4.30211938490693,4.0798280022465,3.2382191498269,0.649776417447669,3.58421509677868,10.5333315098814,42.4371503219364,24.6796704372725,30.3872034078893,7.88723150749411,30.7983545794363,45.8649431471962,21.3320010945999,9.95858788651585,10.1343946190039,10.1104889002957,5.82337786567206,5.69663344023778,15.7348667408714,8.32729568477452,8.8294988710521,10.3776973765226,6.48107354376277,9.99504010653491,9.42499434972566,17.0564527736718,15.0383331196708,10.6153266233985,37.2063754879041,27.1635067706284,21.3345111379498,5.59175283654366,2.92780797011547,2.72280718857492,2.29911349687732,3.47463861067169,0.599902730993408,2.28726408731516,4.94309110035915,5.03250663100489,2.26177833803156,3.65031072403781,3.83573185995496,7.48036960414416,5.84068547043927,19.5531578592607,24.6325801807984,7.32895999457657,4.8401626853889,4.68433594665733,6.43725892413724,8.46292010085141,10.3986324306643,12.3146063463903,9.22418786050918,9.46387418053261,11.6416516832557,3.66465587985832,8.50977360755187,15.6596500505914,20.604398848192,16.9608822027615,35.1734688187388,30.2499740519677,8.55847347319521,1.40442637462647,2.57347907114715,2.55747149456033,10.7705401718461,8.91199027928165,13.3245925481151,15.1516630774535,16.1346670032871,19.7461904495844,19.3003174142839,25.4859731329638,16.8142093008724,21.7219001885794,15.595909087514,16.7001747664463,16.6667985664879,14.0512073786272,12.8838162009957,8.20130799400096,2.36680608472354,0.660837565967596,3.43785736662608,5.54549451391608,10.4506502337197,10.9537342123779,6.85723983719365,7.56085349072559,5.70676878337677,5.69434873853414,5.27036655116835,6.03204501120647,4.77495532898762,7.40863531052657,4.49409704327111,4.32276099749388,4.18196673834171,5.87970492954553,6.740662243974,11.270773567308,8.14605311381257,12.8008641530633,11.5724102819026,13.7223285559638,14.7610147979602,18.9968460688064,18.3861774243483,2.37162101669719,4.33797274861845,5.11053387294328,6.74586337154561,6.49152388443209,6.27060615356284,5.60176873919124,6.61701116136864,5.35046248357617,3.84385978463314,7.18841032636773,5.58211421502755,3.12037673114561,5.30415643688935,2.87035861635059,2.41221760681684,21.6161232494927,7.01118223550794,7.49638891633319,8.65699937453459,7.27539769694356,6.86775655511445,13.8065311713888,19.3182311379221,18.9162172927429,17.4957104822532,27.2667654404303,18.8442811923099,21.0675677876393,17.7918342055259,0,11.4220193601929,5.4094070032094,4.41498794087572,8.34863067936518,5.15731421005694,19.0164536636943,14.3908428506493,6.31016438832513,7.41833614163613,7.53981892064796,5.01834475700359,9.35754431146055,6.51076020814315,5.66734982344852,9.64444331107329,13.8350722281283,5.14114106274891,15.4714692877013,15.4917075190512,13.3567306669932,13.1976098378028,10.619611067197,6.5550771761845,6.95344181018927,8.86443874852721,13.8791889653963,15.9866276930842,12.4045580720746,12.3601468022352,9.26893183800275,13.9056173491759,7.37930260024991,11.3449097573006,19.4050575279659,6.30213829109586,8.02023839453078,6.00143698088458,10.4630737848941,12.8425548673491,11.8475294833527,14.3098526083862,23.2324990983073,32.1984747713007,4.85162475720916,14.6748765117917,19.8601244835964,15.7416734062487,11.9372344003136,13.29541287935,8.16146342563582,7.04616147639937,5.46786818553129,11.144890870014,6.2966139305702,4.33247451110789,3.2806614653046,4.34678529092393,10.538662659619,11.056164733569,9.53579819250524,10.5013767981662,6.32671987162271,11.9958485604841,11.0165447638237,10.6635030967379,12.6650286972783,13.486434638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| |||
|short_description=p1@Slc39a13 | |||
}} | |||
Revision as of 00:50, 14 September 2013
| Short description: | p1@Slc39a13 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Slc39a13_5end |
| Coexpression cluster: | MCL_coexpression_mm9:564 |
| Association with transcript: | 0bp_to_ENSMUST00000079976, ENSMUST00000111434, ENSMUST00000130252, ENSMUST00000133047, ENSMUST00000153367, NM_026721, uc008kug.1, uc008kuh.1, uc008kui.1_5end |
| EntrezGene: | Slc39a13 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| cardiovascular system | 8.28e-08 | 23 |
| circulatory system | 8.28e-08 | 23 |
| splanchnic layer of lateral plate mesoderm | 4.91e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
