FFCP PHASE1:Hg19::chr7:82073495..82073510,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=781|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1399|TSSclassifier=W|UniProt=P54289|association_with_transcript=-381bp_to_ENST00000356860_5end|coexpression_cluster_id=C10|description=CAGE_peak_11_at_CACNA2D1_5end|id=chr7:82073495..82073510,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002553;2.71e-09;1|ontology_enrichment_celltype_v019_2=CL:0002553,3.05e-09,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.67e-48!57;UBERON:0005068!1.67e-48!57;UBERON:0006241!1.67e-48!57;UBERON:0007135!1.67e-48!57;UBERON:0002780!5.48e-44!41;UBERON:0001890!5.48e-44!41;UBERON:0006240!5.48e-44!41;UBERON:0000073!3.36e-43!94;UBERON:0001016!3.36e-43!94;UBERON:0003080!1.08e-42!42;UBERON:0001017!1.25e-42!82;UBERON:0005743!1.11e-41!86;UBERON:0002346!2.72e-40!90;UBERON:0002616!1.97e-39!59;UBERON:0003075!2.25e-39!86;UBERON:0007284!2.25e-39!86;UBERON:0000955!1.40e-37!69;UBERON:0006238!1.40e-37!69;UBERON:0007023!1.09e-36!115;UBERON:0001893!1.98e-36!34;UBERON:0002020!2.31e-36!34;UBERON:0003528!2.31e-36!34;UBERON:0001869!2.62e-36!32;UBERON:0003056!2.79e-35!61;UBERON:0002791!7.21e-35!33;UBERON:0002619!9.39e-34!22;UBERON:0001950!1.80e-30!20;UBERON:0000924!1.36e-29!173;UBERON:0006601!1.36e-29!173;UBERON:0000956!5.03e-29!25;UBERON:0000203!5.03e-29!25;UBERON:0004121!1.65e-28!169;UBERON:0000153!4.96e-26!129;UBERON:0007811!4.96e-26!129;UBERON:0000033!1.66e-25!123;UBERON:0000025!8.11e-13!194;UBERON:0001871!9.67e-12!7;UBERON:0000483!2.92e-11!309;UBERON:0000119!5.59e-11!312;UBERON:0002021!1.96e-10!5;UBERON:0000349!2.54e-10!5;UBERON:0001872!4.95e-10!5;UBERON:0004111!9.37e-10!241;UBERON:0002420!2.95e-09!9;UBERON:0007245!2.95e-09!9;UBERON:0010009!2.95e-09!9;UBERON:0010011!2.95e-09!9;UBERON:0000454!2.95e-09!9;UBERON:0001894!7.78e-09!7;UBERON:0006222!7.78e-09!7;UBERON:0002308!8.50e-09!9;UBERON:0000125!8.50e-09!9;UBERON:0000475!2.73e-08!365;UBERON:0000200!4.39e-08!6;UBERON:0000064!5.95e-08!219;UBERON:0003076!7.97e-08!15;UBERON:0003057!7.97e-08!15;UBERON:0000477!8.05e-08!286;UBERON:0000369!1.38e-07!4;UBERON:0002435!1.38e-07!4;UBERON:0000204!1.38e-07!4;UBERON:0010082!1.38e-07!4;UBERON:0003296!1.56e-07!4;UBERON:0010133!1.56e-07!4;UBERON:0000481!5.31e-07!347|ontology_enrichment_uberon_v019=UBERON:0001950;1.19e-50;20!UBERON:0002619;4.50e-46;22!UBERON:0000956;1.58e-40;25!UBERON:0000203;1.58e-40;25!UBERON:0001869;7.16e-35;32!UBERON:0002791;6.75e-34;32!UBERON:0001893;5.20e-31;34!UBERON:0003528;4.63e-30;34!UBERON:0002020;4.63e-30;34!UBERON:0002021;7.79e-25;5!UBERON:0002780;4.31e-21;41!UBERON:0001890;4.31e-21;41!UBERON:0001871;5.69e-18;6!UBERON:0001876;1.42e-16;2!UBERON:0000349;1.79e-14;5!UBERON:0000073;9.89e-14;53!UBERON:0002616;9.89e-14;53!UBERON:0001016;1.13e-12;83!UBERON:0001017;8.14e-11;75!UBERON:0000955;7.32e-10;68!UBERON:0001882;6.72e-09;1!UBERON:0002022;6.72e-09;1!UBERON:0003112;6.72e-09;1!UBERON:0011158;6.72e-09;1!UBERON:0003128;6.72e-09;1!UBERON:0005403;6.72e-09;1!UBERON:0001703;6.72e-09;1!UBERON:0002241;6.72e-09;1!UBERON:0002420;2.87e-08;9!UBERON:0007245;2.87e-08;9!UBERON:0010009;2.87e-08;9!UBERON:0010011;2.87e-08;9!UBERON:0000454;2.87e-08;9!UBERON:0001872;2.66e-07;5!UBERON:0011216;8.08e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0001950,8.61e-51,20;UBERON:0002619,3.34e-46,22;UBERON:0000956,1.22e-40,25;UBERON:0000203,1.22e-40,25;UBERON:0002791,3.34e-37,32;UBERON:0001869,3.34e-37,32;UBERON:0003528,6.02e-35,34;UBERON:0002020,6.02e-35,34;UBERON:0001893,6.02e-35,34;UBERON:0002780,9.63e-29,41;UBERON:0001890,9.63e-29,41;UBERON:0003080,9.63e-29,41;UBERON:0006240,9.63e-29,41;UBERON:0002021,6.10e-25,5;UBERON:0001016,7.00e-24,89;UBERON:0001017,8.39e-24,81;UBERON:0000955,4.30e-22,68;UBERON:0006238,4.30e-22,68;UBERON:0000073,7.64e-22,53;UBERON:0002616,7.64e-22,53;UBERON:0003056,8.28e-22,61;UBERON:0001049,1.43e-20,56;UBERON:0005068,1.43e-20,56;UBERON:0006241,1.43e-20,56;UBERON:0007135,1.43e-20,56;UBERON:0001871,5.70e-18,6;UBERON:0001876,1.37e-16,2;UBERON:0003075,1.20e-15,82;UBERON:0007284,1.20e-15,82;UBERON:0002346,8.24e-15,86;UBERON:0000349,1.27e-14,5;UBERON:0004121,4.25e-14,171;UBERON:0000924,4.25e-14,171;UBERON:0006601,4.25e-14,171;UBERON:0011216,1.20e-12,223;UBERON:0010371,7.81e-12,104;UBERON:0010314,8.33e-12,132;UBERON:0001882,3.88e-09,1;UBERON:0005403,3.88e-09,1;UBERON:0002022,5.31e-09,1;UBERON:0003112,9.17e-09,1;UBERON:0011158,9.17e-09,1;UBERON:0003128,9.17e-09,1;UBERON:0001703,9.17e-09,1;UBERON:0002241,9.17e-09,1;UBERON:0004761,9.17e-09,1;UBERON:0009617,9.17e-09,1;UBERON:0002420,2.38e-08,9;UBERON:0007245,2.38e-08,9;UBERON:0010009,2.38e-08,9;UBERON:0010011,2.38e-08,9;UBERON:0000454,2.38e-08,9;UBERON:0007023,1.58e-07,114;UBERON:0001872,2.70e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=781 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1399 | |||
|TSSclassifier=W | |||
|UniProt=P54289 | |||
|association_with_transcript=-381bp_to_ENST00000356860_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_11_at_CACNA2D1_5end | |||
|id=chr7:82073495..82073510,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;2.71e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.05e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001950;1.19e-50;20!UBERON:0002619;4.50e-46;22!UBERON:0000956;1.58e-40;25!UBERON:0000203;1.58e-40;25!UBERON:0001869;7.16e-35;32!UBERON:0002791;6.75e-34;32!UBERON:0001893;5.20e-31;34!UBERON:0003528;4.63e-30;34!UBERON:0002020;4.63e-30;34!UBERON:0002021;7.79e-25;5!UBERON:0002780;4.31e-21;41!UBERON:0001890;4.31e-21;41!UBERON:0001871;5.69e-18;6!UBERON:0001876;1.42e-16;2!UBERON:0000349;1.79e-14;5!UBERON:0000073;9.89e-14;53!UBERON:0002616;9.89e-14;53!UBERON:0001016;1.13e-12;83!UBERON:0001017;8.14e-11;75!UBERON:0000955;7.32e-10;68!UBERON:0001882;6.72e-09;1!UBERON:0002022;6.72e-09;1!UBERON:0003112;6.72e-09;1!UBERON:0011158;6.72e-09;1!UBERON:0003128;6.72e-09;1!UBERON:0005403;6.72e-09;1!UBERON:0001703;6.72e-09;1!UBERON:0002241;6.72e-09;1!UBERON:0002420;2.87e-08;9!UBERON:0007245;2.87e-08;9!UBERON:0010009;2.87e-08;9!UBERON:0010011;2.87e-08;9!UBERON:0000454;2.87e-08;9!UBERON:0001872;2.66e-07;5!UBERON:0011216;8.08e-07;132 | |||
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|short_description=p11@CACNA2D1 | |||
}} |
Revision as of 02:12, 14 September 2013
Short description: | p11@CACNA2D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_CACNA2D1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -381bp_to_ENST00000356860_5end |
EntrezGene: | CACNA2D1 |
HGNC: | 1399 |
UniProt: | P54289 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.05e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.