FFCP PHASE1:Mm9::chr4:140971917..140971931,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56365|HGNC=|MCL_coexpression_id=11|UniProt=Q9WUB6,A2ADB7|association_with_transcript=0bp_to_ENSMUST00000006378,ENSMUST00000105788_5end|description=CAGE_peak_2_at_Clcnkb_5end|id=chr4:140971917..140971931,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!2.62e-27!14;UBERON:0003918!2.62e-27!14;UBERON:0005095!2.62e-27!14;UBERON:0007687!2.62e-27!14;UBERON:0006554!1.46e-23!16;UBERON:0001008!5.07e-22!17;UBERON:0000489!2.54e-17!21;UBERON:0005172!2.37e-08!49;UBERON:0005173!2.37e-08!49;UBERON:0002417!2.37e-08!49;UBERON:0000916!2.37e-08!49;UBERON:0003103!3.80e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0002113,6.87e-42,14;UBERON:0003918,6.87e-42,14;UBERON:0011143,6.87e-42,14;UBERON:0005095,6.87e-42,14;UBERON:0007687,6.87e-42,14;UBERON:0006554,1.81e-32,18;UBERON:0001008,9.88e-31,19;UBERON:0000489,9.43e-28,21;UBERON:0003103,3.25e-13,43;UBERON:0005172,1.67e-11,49;UBERON:0005173,1.67e-11,49;UBERON:0002417,1.67e-11,49;UBERON:0000916,1.67e-11,49;UBERON:0003104,4.39e-09,61;UBERON:0009142,4.39e-09,61;UBERON:0001044,1.24e-08,1;UBERON:0001736,1.24e-08,1;UBERON:0003293,1.24e-08,1;UBERON:0003294,1.24e-08,1;UBERON:0001829,1.24e-08,1;UBERON:0010047,1.24e-08,1;UBERON:0000167,1.24e-08,1;UBERON:0006298,1.24e-08,1;UBERON:0009569,2.48e-08,66;UBERON:0005177,8.11e-07,79|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,1.76905930903572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,2.25415471346161,1.4255592949172,6.0125271021964,5.89140887078676,20.1724553426381,16.5323365737154,14.4438829614065,16.2884256376777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34937519160848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0.561142271657738,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0.220591419119515,0|short_description=p2@Clcnkb}} | ||
|EntrezGene=56365 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|UniProt=Q9WUB6,A2ADB7 | |||
|association_with_transcript=0bp_to_ENSMUST00000006378,ENSMUST00000105788_5end | |||
|description=CAGE_peak_2_at_Clcnkb_5end | |||
|id=chr4:140971917..140971931,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!2.62e-27!14;UBERON:0003918!2.62e-27!14;UBERON:0005095!2.62e-27!14;UBERON:0007687!2.62e-27!14;UBERON:0006554!1.46e-23!16;UBERON:0001008!5.07e-22!17;UBERON:0000489!2.54e-17!21;UBERON:0005172!2.37e-08!49;UBERON:0005173!2.37e-08!49;UBERON:0002417!2.37e-08!49;UBERON:0000916!2.37e-08!49;UBERON:0003103!3.80e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,6.87e-42,14;UBERON:0003918,6.87e-42,14;UBERON:0011143,6.87e-42,14;UBERON:0005095,6.87e-42,14;UBERON:0007687,6.87e-42,14;UBERON:0006554,1.81e-32,18;UBERON:0001008,9.88e-31,19;UBERON:0000489,9.43e-28,21;UBERON:0003103,3.25e-13,43;UBERON:0005172,1.67e-11,49;UBERON:0005173,1.67e-11,49;UBERON:0002417,1.67e-11,49;UBERON:0000916,1.67e-11,49;UBERON:0003104,4.39e-09,61;UBERON:0009142,4.39e-09,61;UBERON:0001044,1.24e-08,1;UBERON:0001736,1.24e-08,1;UBERON:0003293,1.24e-08,1;UBERON:0003294,1.24e-08,1;UBERON:0001829,1.24e-08,1;UBERON:0010047,1.24e-08,1;UBERON:0000167,1.24e-08,1;UBERON:0006298,1.24e-08,1;UBERON:0009569,2.48e-08,66;UBERON:0005177,8.11e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,1.94112595522402,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,1.76905930903572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,2.25415471346161,1.4255592949172,6.0125271021964,5.89140887078676,20.1724553426381,16.5323365737154,14.4438829614065,16.2884256376777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34937519160848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0,0,0.263069711437843,0.135804113845862,0.561142271657738,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p2@Clcnkb | |||
}} |
Revision as of 04:19, 14 September 2013
Short description: | p2@Clcnkb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Clcnkb_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_ENSMUST00000006378, ENSMUST00000105788_5end |
EntrezGene: | Clcnkb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 6.87e-42 | 14 |
kidney mesenchyme | 6.87e-42 | 14 |
upper urinary tract | 6.87e-42 | 14 |
kidney rudiment | 6.87e-42 | 14 |
kidney field | 6.87e-42 | 14 |
urinary system structure | 1.81e-32 | 18 |
renal system | 9.88e-31 | 19 |
cavitated compound organ | 9.43e-28 | 21 |
compound organ | 3.25e-13 | 43 |
abdomen element | 1.67e-11 | 49 |
abdominal segment element | 1.67e-11 | 49 |
abdominal segment of trunk | 1.67e-11 | 49 |
abdomen | 1.67e-11 | 49 |
mesenchyme | 4.39e-09 | 61 |
entire embryonic mesenchyme | 4.39e-09 | 61 |
saliva-secreting gland | 1.24e-08 | 1 |
submandibular gland | 1.24e-08 | 1 |
gland of oral region | 1.24e-08 | 1 |
gland of foregut | 1.24e-08 | 1 |
major salivary gland | 1.24e-08 | 1 |
oral gland | 1.24e-08 | 1 |
oral cavity | 1.24e-08 | 1 |
submandibular gland primordium | 1.24e-08 | 1 |
subdivision of trunk | 2.48e-08 | 66 |
trunk region element | 8.11e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.