FFCP PHASE1:Mm9::chr4:147360001..147360012,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18158|HGNC=|MCL_coexpression_id=329|UniProt=P40753,Q54AE9|association_with_transcript=103bp_to_NM_008726,uc008vto.2,uc008vtp.2_5end|description=CAGE_peak_1_at_Nppb_5end|id=chr4:147360001..147360012,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.04e-16!18;UBERON:0000948!2.04e-16!18;UBERON:0005498!2.04e-16!18;UBERON:0004140!2.04e-16!18;UBERON:0009881!2.04e-16!18;UBERON:0004141!2.04e-16!18;UBERON:0003084!2.04e-16!18;UBERON:0007005!2.04e-16!18;UBERON:0004139!2.04e-16!18;UBERON:0004291!2.04e-16!18;UBERON:0004535!5.62e-13!23;UBERON:0001009!5.62e-13!23;UBERON:0004872!1.02e-08!33;UBERON:0003103!6.43e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.59e-21,18;UBERON:0000948,1.59e-21,18;UBERON:0005498,1.59e-21,18;UBERON:0004140,1.59e-21,18;UBERON:0009881,1.59e-21,18;UBERON:0004141,1.59e-21,18;UBERON:0003084,1.59e-21,18;UBERON:0007005,1.59e-21,18;UBERON:0004139,1.59e-21,18;UBERON:0004291,1.59e-21,18;UBERON:0004535,1.62e-15,23;UBERON:0001009,1.62e-15,23;UBERON:0004872,8.68e-12,33;UBERON:0003103,3.97e-08,43|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44277056966847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0.771778308107841,26.3610764743656,166.046413713336,0,0,0,0.677689064138264,0,0.449949858640699,0,0,1.19840044207362,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,168.869411133,19.7997487479778,0.289864488701678,0,1.3599426674155,0,0,0,5.89866564553358,0,0,0,0,0,0,0,1.08245520505607,1.77351905832569,0.505524445014783,0.11418387971906,0,1.03909497345377,0.173485326766136,0.304465478312141,0.230615497256059,0.753613202763113,0.117588707135705,0,7.91023896749996,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,262.842605347552,162.057507446937,176.820944354717,125.711454595747,128.487043331055,176.481577143161,227.185664021148,385.777151212652,1012.70581435046,179.534796255607,263.324612382869,109.523961696451,198.831982898452,423.951272627019,135.011657272934,0,0,0,0,0.426576501070468,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.114248512609729,0,4.48032921259691,0,0,0,0,0,0,0,3.83743743147016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84753190166605,11.9379589415405,3.09633455239849,2.54617628662782,0.704070744865506,5.86271901046355,7.85544014923845,3.51240566144038,0.157635144106191,0,0.159454768657487,0.163863314715738,0.863424909329478,0.144649058581512,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0.584511715822624,1.18586333383957,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,7.50949465803873,32.4103068421645,0,1.15420377059036,0,0.482503399425247,0.477489376012546,0.656563598980245,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0,0,0,0,0,0.621339313086926,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0.948033361884535,0,0.102710957164827,2.46849563657811,0,7.3512101269068,0,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0,0.233753804363138,0.680191150845634,2.88581739386284,70.2459497252195,87.803654358413,0,1.68914227906064,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24544817101012,1.19707462020309,1.19513524027894,0.972426868273176,0,0.367687016900028,3.33370091702423,3.29656091582231,2.88827288632634,3.03236654116557,2.28131369901216,2.45214243801899,3.27745276144588,2.04880487695582,2.64203157195821,3.33405583898152,3.1288768005111,2.31491064556446,3.70877310722976,3.82717192349433,3.08582327146874,1.4198064492747,2.38436189947321,2.0348498328526,2.82328141245992,2.11536519729191,2.19513567447327,3.6829759601298,2.17286582153379,3.36685362994643,2.49133538060766,2.46261205938909,2.04615521584845,3.71848418846318,1.92906610981141,0.249810577937946,7.01794825336225,3.00819475667618,0,0.661774257358546,0.231867835620421|short_description=p1@Nppb}} | ||
|EntrezGene=18158 | |||
|HGNC= | |||
|MCL_coexpression_id=329 | |||
|UniProt=P40753,Q54AE9 | |||
|association_with_transcript=103bp_to_NM_008726,uc008vto.2,uc008vtp.2_5end | |||
|description=CAGE_peak_1_at_Nppb_5end | |||
|id=chr4:147360001..147360012,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.04e-16!18;UBERON:0000948!2.04e-16!18;UBERON:0005498!2.04e-16!18;UBERON:0004140!2.04e-16!18;UBERON:0009881!2.04e-16!18;UBERON:0004141!2.04e-16!18;UBERON:0003084!2.04e-16!18;UBERON:0007005!2.04e-16!18;UBERON:0004139!2.04e-16!18;UBERON:0004291!2.04e-16!18;UBERON:0004535!5.62e-13!23;UBERON:0001009!5.62e-13!23;UBERON:0004872!1.02e-08!33;UBERON:0003103!6.43e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.59e-21,18;UBERON:0000948,1.59e-21,18;UBERON:0005498,1.59e-21,18;UBERON:0004140,1.59e-21,18;UBERON:0009881,1.59e-21,18;UBERON:0004141,1.59e-21,18;UBERON:0003084,1.59e-21,18;UBERON:0007005,1.59e-21,18;UBERON:0004139,1.59e-21,18;UBERON:0004291,1.59e-21,18;UBERON:0004535,1.62e-15,23;UBERON:0001009,1.62e-15,23;UBERON:0004872,8.68e-12,33;UBERON:0003103,3.97e-08,43 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44277056966847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0.771778308107841,26.3610764743656,166.046413713336,0,0,0,0.677689064138264,0,0.449949858640699,0,0,1.19840044207362,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,168.869411133,19.7997487479778,0.289864488701678,0,1.3599426674155,0,0,0,5.89866564553358,0,0,0,0,0,0,0,1.08245520505607,1.77351905832569,0.505524445014783,0.11418387971906,0,1.03909497345377,0.173485326766136,0.304465478312141,0.230615497256059,0.753613202763113,0.117588707135705,0,7.91023896749996,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0.189106080167819,0,0,0,0.348252166522167,0,0,0,0,0,262.842605347552,162.057507446937,176.820944354717,125.711454595747,128.487043331055,176.481577143161,227.185664021148,385.777151212652,1012.70581435046,179.534796255607,263.324612382869,109.523961696451,198.831982898452,423.951272627019,135.011657272934,0,0,0,0,0.426576501070468,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.114248512609729,0,4.48032921259691,0,0,0,0,0,0,0,3.83743743147016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84753190166605,11.9379589415405,3.09633455239849,2.54617628662782,0.704070744865506,5.86271901046355,7.85544014923845,3.51240566144038,0.157635144106191,0,0.159454768657487,0.163863314715738,0.863424909329478,0.144649058581512,0,0,0,0,0.642202359951168,0.234423373184406,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0.584511715822624,1.18586333383957,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,7.50949465803873,32.4103068421645,0,1.15420377059036,0,0.482503399425247,0.477489376012546,0.656563598980245,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0,0,0,0,0,0,0,0.621339313086926,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0.948033361884535,0,0.102710957164827,2.46849563657811,0,7.3512101269068,0,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0,0.233753804363138,0.680191150845634,2.88581739386284,70.2459497252195,87.803654358413,0,1.68914227906064,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24544817101012,1.19707462020309,1.19513524027894,0.972426868273176,0,0.367687016900028,3.33370091702423,3.29656091582231,2.88827288632634,3.03236654116557,2.28131369901216,2.45214243801899,3.27745276144588,2.04880487695582,2.64203157195821,3.33405583898152,3.1288768005111,2.31491064556446,3.70877310722976,3.82717192349433,3.08582327146874,1.4198064492747,2.38436189947321,2.0348498328526,2.82328141245992,2.11536519729191,2.19513567447327,3.6829759601298,2.17286582153379,3.36685362994643,2.49133538060766,2.46261205938909,2.04615521584845,3.71848418846318,1.92906610981141,0.249810577937946,7.01794825336225,3.00819475667618,0,0.661774257358546,0.231867835620421 | |||
|short_description=p1@Nppb | |||
}} |
Revision as of 04:24, 14 September 2013
Short description: | p1@Nppb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nppb_5end |
Coexpression cluster: | MCL_coexpression_mm9:329 |
Association with transcript: | 103bp_to_NM_008726, uc008vto.2, uc008vtp.2_5end |
EntrezGene: | Nppb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.59e-21 | 18 |
heart | 1.59e-21 | 18 |
primitive heart tube | 1.59e-21 | 18 |
primary heart field | 1.59e-21 | 18 |
anterior lateral plate mesoderm | 1.59e-21 | 18 |
heart tube | 1.59e-21 | 18 |
heart primordium | 1.59e-21 | 18 |
cardiac mesoderm | 1.59e-21 | 18 |
cardiogenic plate | 1.59e-21 | 18 |
heart rudiment | 1.59e-21 | 18 |
cardiovascular system | 1.62e-15 | 23 |
circulatory system | 1.62e-15 | 23 |
splanchnic layer of lateral plate mesoderm | 8.68e-12 | 33 |
compound organ | 3.97e-08 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.