FFCP PHASE1:Hg19::chr8:68256003..68256034,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10565|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15772|TSSclassifier=S|UniProt=Q9Y6D6,E5RJN9|association_with_transcript=-91bp_to_ENST00000262215,ENST00000519436,NM_006421,uc003xxo.1_5end|coexpression_cluster_id=C176|description=CAGE_peak_1_at_ARFGEF1_5end|id=chr8:68256003..68256034,-|ontology_enrichment_celltype=CL:0000738!2.35e-43!140;CL:0000037!1.86e-42!172;CL:0000566!1.86e-42!172;CL:0002032!1.59e-38!165;CL:0000837!1.59e-38!165;CL:0000988!4.36e-37!182;CL:0002087!4.83e-35!119;CL:0002031!5.69e-34!124;CL:0000766!3.29e-27!76;CL:0000763!3.50e-25!112;CL:0000049!3.50e-25!112;CL:0000557!3.61e-24!71;CL:0002009!5.68e-22!65;CL:0002194!2.81e-21!63;CL:0000576!2.81e-21!63;CL:0000040!2.81e-21!63;CL:0000559!2.81e-21!63;CL:0000839!7.87e-21!70;CL:0002057!2.07e-20!42;CL:0000860!1.06e-18!45;CL:0000838!3.66e-12!52;CL:0000542!5.83e-12!53;CL:0000051!5.83e-12!53;CL:0000791!2.11e-10!18;CL:0000789!2.11e-10!18;CL:0002420!2.11e-10!18;CL:0002419!2.11e-10!18;CL:0000790!2.11e-10!18;CL:0000084!5.09e-09!25;CL:0000827!5.09e-09!25;CL:0000625!6.72e-07!11|ontology_enrichment_celltype_v019=CL:0000860;5.64e-17;33!CL:0002057;5.64e-17;33!CL:0000576;1.50e-14;48!CL:0000473;1.59e-13;39!CL:0000234;1.59e-13;39!CL:0000766;5.54e-12;69!CL:0002087;3.34e-11;104!CL:0000791;2.01e-10;18!CL:0000789;2.01e-10;18!CL:0002419;2.01e-10;18!CL:0000738;5.69e-10;136!CL:0000084;5.61e-09;25!CL:0000763;6.73e-09;100!CL:0000542;1.64e-07;53!CL:0000988;1.98e-07;177!CL:0000625;6.40e-07;11|ontology_enrichment_celltype_v019_2=CL:0000738,8.48e-45,136;CL:0000037,1.33e-43,168;CL:0002032,1.26e-39,161;CL:0000837,1.26e-39,161;CL:0000988,8.64e-39,177;CL:0002087,1.89e-36,115;CL:0002031,2.75e-35,120;CL:0000766,6.03e-29,72;CL:0000763,2.69e-26,108;CL:0000049,2.69e-26,108;CL:0000557,7.82e-26,67;CL:0002009,1.25e-23,61;CL:0002194,6.15e-23,59;CL:0000576,6.15e-23,59;CL:0000040,6.15e-23,59;CL:0000559,6.15e-23,59;CL:0000839,2.66e-22,66;CL:0000860,2.07e-20,42;CL:0002057,2.07e-20,42;CL:0000473,2.49e-19,48;CL:0000234,2.49e-19,48;CL:0000838,3.66e-12,52;CL:0000542,5.83e-12,53;CL:0000051,5.83e-12,53;CL:0000791,2.11e-10,18;CL:0000789,2.11e-10,18;CL:0002420,2.11e-10,18;CL:0002419,2.11e-10,18;CL:0000790,2.11e-10,18;CL:0000084,5.09e-09,25;CL:0000827,5.09e-09,25;CL:0000625,6.72e-07,11|ontology_enrichment_development_v019=CL:0002057;5.47e-15;42!CL:0000790;2.01e-10;18!CL:0000049;1.38e-07;108!CL:0000051;1.64e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.81e-26!102;UBERON:0003061!1.81e-26!102;UBERON:0002193!3.87e-23!112;UBERON:0002371!1.12e-18!80;UBERON:0001474!3.98e-16!86;UBERON:0007023!1.34e-14!115;UBERON:0002405!9.31e-13!115;UBERON:0004765!1.33e-11!101;UBERON:0001434!1.33e-11!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.62e-28,98;UBERON:0003061,9.62e-28,98;UBERON:0002193,3.56e-24,108;UBERON:0002371,7.52e-20,76;UBERON:0002405,7.66e-19,93;UBERON:0001474,4.38e-17,82;UBERON:0007023,2.36e-14,114;UBERON:0004765,1.12e-13,90;UBERON:0001434,2.67e-11,100|phase1_expression=10.1739892391512,8.56402095563933,8.88012745804618,9.00659685178174,12.9618717383913,9.59572376510406,10.1319951267324,1.89515962028049,5.48489819219661,2.94880723801811,2.09340350391728,3.9319446983431,2.63766978228454,5.5694858832021,5.96515276310248,4.70627602516243,4.82155622419182,2.92124036154949,3.41552959153355,3.44738962615006,3.67201244239655,2.82109249330279,12.3081474466354,14.6455634827986,16.8227137057036,15.3590945553382,16.2559167110893,19.3628522031651,22.8151280572364,34.1608164306519,27.5572699502615,7.35536979583142,5.72291245678675,9.98335827450327,12.8595552963301,14.0747540162547,24.0752360254575,62.6014811641022,52.5426452371771,57.073858998269,32.691659239029,32.065472935879,37.6060328745912,46.5274364094607,39.2990981436362,47.3038919316242,53.2262494514018,39.0609493620735,40.5715345872586,39.9892425327789,42.2665165773016,27.4319386670759,39.6457532847111,43.8929584837002,31.1480919166986,46.8723425461086,43.6649840092553,35.9557575112135,55.0951006267625,42.0417025469683,51.1469700639233,42.8806690242731,45.6771775953537,50.2945205628579,43.241176555659,55.0363667950406,44.2203796786858,47.2347490682677,29.2030434315313,34.9674039975238,43.5887641896025,36.8277635987565,33.2285506812929,16.6891676186434,19.1343869968539,16.1437157041449,34.709547024267,27.3321944971541,37.2883361137226,23.6560577305236,22.079751169099,15.5264530699939,17.5996244461323,26.7607919518444,23.1272406004524,33.2849573601876,22.0217792869807,24.1396024780883,22.4755256746853,15.2648600725658,44.398611590537,54.0258214221264,46.6373338312779,37.0079720021272,42.0381422236152,18.9636541038055,68.8484195398416,65.6327973791105,59.2132317118587,25.4123472993831,40.0884387959316,45.9244371562691,37.0170783975031,25.9586364542454,24.4522903204115,27.9132707175363,27.3511902402666,22.0317069928161,25.621691469296,25.8167510227772,24.318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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10565 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15772 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y6D6,E5RJN9 | |||
|association_with_transcript=-91bp_to_ENST00000262215,ENST00000519436,NM_006421,uc003xxo.1_5end | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_ARFGEF1_5end | |||
|id=chr8:68256003..68256034,- | |||
|ontology_enrichment_celltype=CL:0000738!2.35e-43!140;CL:0000037!1.86e-42!172;CL:0000566!1.86e-42!172;CL:0002032!1.59e-38!165;CL:0000837!1.59e-38!165;CL:0000988!4.36e-37!182;CL:0002087!4.83e-35!119;CL:0002031!5.69e-34!124;CL:0000766!3.29e-27!76;CL:0000763!3.50e-25!112;CL:0000049!3.50e-25!112;CL:0000557!3.61e-24!71;CL:0002009!5.68e-22!65;CL:0002194!2.81e-21!63;CL:0000576!2.81e-21!63;CL:0000040!2.81e-21!63;CL:0000559!2.81e-21!63;CL:0000839!7.87e-21!70;CL:0002057!2.07e-20!42;CL:0000860!1.06e-18!45;CL:0000838!3.66e-12!52;CL:0000542!5.83e-12!53;CL:0000051!5.83e-12!53;CL:0000791!2.11e-10!18;CL:0000789!2.11e-10!18;CL:0002420!2.11e-10!18;CL:0002419!2.11e-10!18;CL:0000790!2.11e-10!18;CL:0000084!5.09e-09!25;CL:0000827!5.09e-09!25;CL:0000625!6.72e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.64e-17;33!CL:0002057;5.64e-17;33!CL:0000576;1.50e-14;48!CL:0000473;1.59e-13;39!CL:0000234;1.59e-13;39!CL:0000766;5.54e-12;69!CL:0002087;3.34e-11;104!CL:0000791;2.01e-10;18!CL:0000789;2.01e-10;18!CL:0002419;2.01e-10;18!CL:0000738;5.69e-10;136!CL:0000084;5.61e-09;25!CL:0000763;6.73e-09;100!CL:0000542;1.64e-07;53!CL:0000988;1.98e-07;177!CL:0000625;6.40e-07;11 | |||
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|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@ARFGEF1 | |||
}} |
Revision as of 05:54, 14 September 2013
Short description: | p1@ARFGEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ARFGEF1_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | -91bp_to_ENST00000262215, ENST00000519436, NM_006421, uc003xxo.1_5end |
EntrezGene: | ARFGEF1 |
HGNC: | 15772 |
UniProt: | Q9Y6D6E5RJN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.62e-28 | 98 |
blood island | 9.62e-28 | 98 |
hemolymphoid system | 3.56e-24 | 108 |
bone marrow | 7.52e-20 | 76 |
immune system | 7.66e-19 | 93 |
bone element | 4.38e-17 | 82 |
adult organism | 2.36e-14 | 114 |
skeletal element | 1.12e-13 | 90 |
skeletal system | 2.67e-11 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.