FFCP PHASE1:Mm9::chr5:24107733..24107740,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66993|HGNC=|UniProt=|association_with_transcript=12bp_to_ENSMUST00000143501_5end|description=CAGE_peak_17_at_Smarcd3_5end|id=chr5:24107733..24107740,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002609,8.02e-16,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,1.76272340924412,0.540023753326763,0.630974884054146,0,0.441737081903227,0.367472397644862,0.0958454710182364,0,0,0,0,0.395658863190582,0.0914876436024097,0.52091337055676,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0,0,0,0.305518091550949,0,0,0,0.390361328888111,0,0,0.30140963567143,0.0680364991513279,0,0,0,0.215567992932842,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0.469052119962192,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0,0.126473074248515,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0.517434735131018,0,0,0,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.627264888043406,0,0,0,0,0,0,0,0,0.165458490457098,0.583353565032143,0.129159823477731,0.168956125490778,0,0,0.209718688851422,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0,0,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0,0,0,0|short_description=p17@Smarcd3}} | ||
|EntrezGene=66993 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=12bp_to_ENSMUST00000143501_5end | |||
|description=CAGE_peak_17_at_Smarcd3_5end | |||
|id=chr5:24107733..24107740,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,8.02e-16,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,1.76272340924412,0.540023753326763,0.630974884054146,0,0.441737081903227,0.367472397644862,0.0958454710182364,0,0,0,0,0.395658863190582,0.0914876436024097,0.52091337055676,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251308704225729,0,0,0,0,0.305518091550949,0,0,0,0.390361328888111,0,0,0.30140963567143,0.0680364991513279,0,0,0,0.215567992932842,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0.207125772535502,0.469052119962192,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0,0.126473074248515,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0.517434735131018,0,0,0,0.164549020602121,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.627264888043406,0,0,0,0,0,0,0,0,0.165458490457098,0.583353565032143,0.129159823477731,0.168956125490778,0,0,0.209718688851422,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.287177344778066,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0,0,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0,0,0,0 | |||
|short_description=p17@Smarcd3 | |||
}} |
Revision as of 07:17, 14 September 2013
Short description: | p17@Smarcd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_Smarcd3_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENSMUST00000143501_5end |
EntrezGene: | Smarcd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 8.02e-16 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.