FFCP PHASE1:Mm9::chr6:148392813..148392825,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=387314|HGNC=|MCL_coexpression_id=3553|UniProt=Q3UV71|association_with_transcript=48bp_to_NM_198967,uc009eti.2,uc009etj.2_5end|description=CAGE_peak_3_at_Tmtc1_5end|id=chr6:148392813..148392825,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!5.51e-10!122;UBERON:0001049!1.46e-09!52;UBERON:0005068!1.46e-09!52;UBERON:0006241!1.46e-09!52;UBERON:0007135!1.46e-09!52;UBERON:0004121!3.78e-09!102;UBERON:0000924!3.78e-09!102;UBERON:0006601!3.78e-09!102;UBERON:0000955!7.89e-09!50;UBERON:0006238!7.89e-09!50;UBERON:0000025!8.39e-09!114;UBERON:0000033!1.84e-08!63;UBERON:0002346!1.93e-08!71;UBERON:0003075!1.93e-08!71;UBERON:0007284!1.93e-08!71;UBERON:0002616!2.71e-08!49;UBERON:0001017!3.01e-08!73;UBERON:0005743!3.01e-08!73;UBERON:0000468!1.14e-07!333;UBERON:0002048!1.28e-07!14;UBERON:0000117!1.28e-07!14;UBERON:0000171!1.28e-07!14;UBERON:0000170!1.28e-07!14;UBERON:0005597!1.28e-07!14;UBERON:0000118!1.28e-07!14;UBERON:0000073!1.40e-07!75;UBERON:0001016!1.40e-07!75;UBERON:0003080!4.41e-07!40;UBERON:0002780!7.34e-07!39;UBERON:0001890!7.34e-07!39;UBERON:0006240!7.34e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.13e-10,122;UBERON:0000025,1.27e-10,114;UBERON:0000073,6.71e-10,54;UBERON:0001049,1.68e-09,52;UBERON:0005068,1.68e-09,52;UBERON:0006241,1.68e-09,52;UBERON:0007135,1.68e-09,52;UBERON:0002048,1.17e-08,14;UBERON:0000117,1.17e-08,14;UBERON:0000171,1.17e-08,14;UBERON:0000170,1.17e-08,14;UBERON:0005597,1.17e-08,14;UBERON:0000118,1.17e-08,14;UBERON:0010314,1.53e-08,92;UBERON:0000955,3.83e-08,47;UBERON:0006238,3.83e-08,47;UBERON:0002616,1.73e-07,46;UBERON:0003080,4.64e-07,40;UBERON:0002346,5.59e-07,64;UBERON:0003075,5.59e-07,64;UBERON:0007284,5.59e-07,64;UBERON:0002780,9.08e-07,39;UBERON:0001890,9.08e-07,39;UBERON:0006240,9.08e-07,39|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47673941043627,0,0.439372365468944,0,1.25987779462826,0,0,0,0,0.257259436035947,2.86533439938757,1.54701627683233,0.606949382578793,0.528990979272033,0.633831403506179,0.677689064138264,0,0,0,0,0.299600110518405,0.384218305321555,0.933206510776299,1.62007125998029,0.841299845405528,0.856952953211411,1.32521124570968,0.367472397644862,0.383381884072945,0,1.10115880999389,1.65993539510744,1.0752457327937,0.131886287730194,0.548925861614458,1.04182674111352,0,2.25105044012672,1.83357897332172,1.47314292736834,2.98980529678116,1.86399445825301,0,0.0755715601067855,2.02905142091174,0,0,0,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0.742210695324124,0.346970653532272,1.21786191324856,1.61430848079241,1.20578112442098,1.99900802130698,0.251333182659351,2.71914464507811,2.02439099687876,0.884610551949874,1.29413479957927,1.10420759230197,1.45462575940567,1.86391761218122,0.585561594023094,0.628340120440365,0.510914110417183,0,0,0,1.19832511523858,1.83000241127451,0.376963056338593,2.78118912307642,2.30143911597297,1.24672826735736,2.27137768294861,1.62942982160506,0.622034853050465,0.252722758433675,0.420883711772948,0,0.459804208866946,0.180062129805349,0.60281927134286,1.49680298132921,1.15302348256365,0.655912071918102,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0,2.43776516565517,1.64625709126355,0.398068533636986,0,0,0,0.207125772535502,0.938104239924385,0,0.473489471170421,1.57411385397923,0.617068451549513,1.16266972375204,0.536546802799238,3.61972561338225,0.987359099480883,0.32833492815819,2.26992666728396,1.90059983652932,0.658650345873152,2.81833479396781,1.05144974282064,0.411618449517138,0,0.793351699990633,0.853153002140936,0.696710015581316,1.03093969057675,0.201683524623343,1.33426826306922,0.760902504450237,0,0.494096864172033,0.502670417600539,1.79060824837036,0.779856348476481,0,0.216138049874694,0.398282546508734,0.379335801906163,0.456994050438915,1.1270773567308,0.407302655690628,0.387904974335251,0.771494018793504,0.69560190836683,0.738050739898011,0.941992367048249,0.370191491765402,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0.964887042726734,5.35784251483154,0.947457058852424,0.651859905768103,1.18821560042632,1.17345124144251,2.1775813467436,2.38043640886014,1.95133647857799,4.88668946729192,2.6575762757853,3.6674596791222,4.42430949732493,2.93564469172023,3.61622646453779,0,0,0,0.551873492609465,1.60550589987792,1.64096361229084,0,2.27223834483936,0,0,0.215423397732799,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,4.81981974632711,1.70328102249922,0.534196811001766,0.651547837414304,1.81467135269789,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0.307435147943927,1.03371317267288,0.363533729477506,0,0.632073515871632,0,0,1.02131881726136,0.540183282093931,1.16422815404479,1.71469628025274,2.12808280370728,4.28085162244969,2.79733335023606,1.2178597964584,1.64270195644597,0.847328283455281,0.661585194164886,2.30840754118072,0.807322133479528,0.482503399425247,0.596861720015682,1.64140899745061,1.1659233465194,2.03967832211561,0.170870880797853,0.412773735926445,0,0,0.27338845544205,0,0,0.139951452323658,0,0,0.790839983952838,0.813277868507395,1.18805874903981,0.627264888043406,1.52853794622324,0.809186078308924,1.48776220305605,0.26175594198403,0.90730481304255,0.621339313086926,0,0.299033092087958,0.165458490457098,0.388902376688095,0.258319646955462,1.01373675294467,1.29092962510329,0.39061315453185,0.734015410979976,0.241584120826006,1.15212002503146,0,0,0.308132871494482,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,2.26730383615211,0,0,0,1.54551675225752,1.68914227906064,0.549454872801795,0.857473516316263,1.50471631210609,2.25900737046827,1.38097570952153,1.71868654031819,3.26521046453006,2.05524755931193,0.755393897389701,0.675022500231806,2.70192721934532,3.17199686288943,3.10656187051092,0,1.59609949360412,0.682934423016537,0.243106717068294,0.209613162627982,0,1.11123363900808,1.85431551515005,1.28367683836726,0.252697211763798,1.01391719956096,1.88626341386076,1.591905626988,0.448176066834085,0.918967503289812,0.952587382566147,0.811190281613988,1.35036454324594,0.824171801606613,0.883193520806384,1.71434626192708,0.532427418478012,0.953744759789284,2.0348498328526,1.50575008664529,1.26921911837515,1.09756783723664,0.526139422875686,0.814824683075171,0.561142271657738,0.949080144993393,1.18205378850676,1.63692417267876,0.619747364743864,0.771626443924566,0.999242311751784,0.701794825336225,0.429742108096597,2.10417165275728,1.98532277207564,2.31867835620421|short_description=p3@Tmtc1}} | ||
|EntrezGene=387314 | |||
|HGNC= | |||
|MCL_coexpression_id=3553 | |||
|UniProt=Q3UV71 | |||
|association_with_transcript=48bp_to_NM_198967,uc009eti.2,uc009etj.2_5end | |||
|description=CAGE_peak_3_at_Tmtc1_5end | |||
|id=chr6:148392813..148392825,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!5.51e-10!122;UBERON:0001049!1.46e-09!52;UBERON:0005068!1.46e-09!52;UBERON:0006241!1.46e-09!52;UBERON:0007135!1.46e-09!52;UBERON:0004121!3.78e-09!102;UBERON:0000924!3.78e-09!102;UBERON:0006601!3.78e-09!102;UBERON:0000955!7.89e-09!50;UBERON:0006238!7.89e-09!50;UBERON:0000025!8.39e-09!114;UBERON:0000033!1.84e-08!63;UBERON:0002346!1.93e-08!71;UBERON:0003075!1.93e-08!71;UBERON:0007284!1.93e-08!71;UBERON:0002616!2.71e-08!49;UBERON:0001017!3.01e-08!73;UBERON:0005743!3.01e-08!73;UBERON:0000468!1.14e-07!333;UBERON:0002048!1.28e-07!14;UBERON:0000117!1.28e-07!14;UBERON:0000171!1.28e-07!14;UBERON:0000170!1.28e-07!14;UBERON:0005597!1.28e-07!14;UBERON:0000118!1.28e-07!14;UBERON:0000073!1.40e-07!75;UBERON:0001016!1.40e-07!75;UBERON:0003080!4.41e-07!40;UBERON:0002780!7.34e-07!39;UBERON:0001890!7.34e-07!39;UBERON:0006240!7.34e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,1.13e-10,122;UBERON:0000025,1.27e-10,114;UBERON:0000073,6.71e-10,54;UBERON:0001049,1.68e-09,52;UBERON:0005068,1.68e-09,52;UBERON:0006241,1.68e-09,52;UBERON:0007135,1.68e-09,52;UBERON:0002048,1.17e-08,14;UBERON:0000117,1.17e-08,14;UBERON:0000171,1.17e-08,14;UBERON:0000170,1.17e-08,14;UBERON:0005597,1.17e-08,14;UBERON:0000118,1.17e-08,14;UBERON:0010314,1.53e-08,92;UBERON:0000955,3.83e-08,47;UBERON:0006238,3.83e-08,47;UBERON:0002616,1.73e-07,46;UBERON:0003080,4.64e-07,40;UBERON:0002346,5.59e-07,64;UBERON:0003075,5.59e-07,64;UBERON:0007284,5.59e-07,64;UBERON:0002780,9.08e-07,39;UBERON:0001890,9.08e-07,39;UBERON:0006240,9.08e-07,39 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.47673941043627,0,0.439372365468944,0,1.25987779462826,0,0,0,0,0.257259436035947,2.86533439938757,1.54701627683233,0.606949382578793,0.528990979272033,0.633831403506179,0.677689064138264,0,0,0,0,0.299600110518405,0.384218305321555,0.933206510776299,1.62007125998029,0.841299845405528,0.856952953211411,1.32521124570968,0.367472397644862,0.383381884072945,0,1.10115880999389,1.65993539510744,1.0752457327937,0.131886287730194,0.548925861614458,1.04182674111352,0,2.25105044012672,1.83357897332172,1.47314292736834,2.98980529678116,1.86399445825301,0,0.0755715601067855,2.02905142091174,0,0,0,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0.258937883647172,0.742210695324124,0.346970653532272,1.21786191324856,1.61430848079241,1.20578112442098,1.99900802130698,0.251333182659351,2.71914464507811,2.02439099687876,0.884610551949874,1.29413479957927,1.10420759230197,1.45462575940567,1.86391761218122,0.585561594023094,0.628340120440365,0.510914110417183,0,0,0,1.19832511523858,1.83000241127451,0.376963056338593,2.78118912307642,2.30143911597297,1.24672826735736,2.27137768294861,1.62942982160506,0.622034853050465,0.252722758433675,0.420883711772948,0,0.459804208866946,0.180062129805349,0.60281927134286,1.49680298132921,1.15302348256365,0.655912071918102,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0,2.43776516565517,1.64625709126355,0.398068533636986,0,0,0,0.207125772535502,0.938104239924385,0,0.473489471170421,1.57411385397923,0.617068451549513,1.16266972375204,0.536546802799238,3.61972561338225,0.987359099480883,0.32833492815819,2.26992666728396,1.90059983652932,0.658650345873152,2.81833479396781,1.05144974282064,0.411618449517138,0,0.793351699990633,0.853153002140936,0.696710015581316,1.03093969057675,0.201683524623343,1.33426826306922,0.760902504450237,0,0.494096864172033,0.502670417600539,1.79060824837036,0.779856348476481,0,0.216138049874694,0.398282546508734,0.379335801906163,0.456994050438915,1.1270773567308,0.407302655690628,0.387904974335251,0.771494018793504,0.69560190836683,0.738050739898011,0.941992367048249,0.370191491765402,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0.964887042726734,5.35784251483154,0.947457058852424,0.651859905768103,1.18821560042632,1.17345124144251,2.1775813467436,2.38043640886014,1.95133647857799,4.88668946729192,2.6575762757853,3.6674596791222,4.42430949732493,2.93564469172023,3.61622646453779,0,0,0,0.551873492609465,1.60550589987792,1.64096361229084,0,2.27223834483936,0,0,0.215423397732799,0.477937595905104,0.445597348164788,0.283076530788832,0.404810701674894,0.292255857911312,0.790575555893047,4.81981974632711,1.70328102249922,0.534196811001766,0.651547837414304,1.81467135269789,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0.307435147943927,1.03371317267288,0.363533729477506,0,0.632073515871632,0,0,1.02131881726136,0.540183282093931,1.16422815404479,1.71469628025274,2.12808280370728,4.28085162244969,2.79733335023606,1.2178597964584,1.64270195644597,0.847328283455281,0.661585194164886,2.30840754118072,0.807322133479528,0.482503399425247,0.596861720015682,1.64140899745061,1.1659233465194,2.03967832211561,0.170870880797853,0.412773735926445,0,0,0.27338845544205,0,0,0.139951452323658,0,0,0.790839983952838,0.813277868507395,1.18805874903981,0.627264888043406,1.52853794622324,0.809186078308924,1.48776220305605,0.26175594198403,0.90730481304255,0.621339313086926,0,0.299033092087958,0.165458490457098,0.388902376688095,0.258319646955462,1.01373675294467,1.29092962510329,0.39061315453185,0.734015410979976,0.241584120826006,1.15212002503146,0,0,0.308132871494482,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,2.26730383615211,0,0,0,1.54551675225752,1.68914227906064,0.549454872801795,0.857473516316263,1.50471631210609,2.25900737046827,1.38097570952153,1.71868654031819,3.26521046453006,2.05524755931193,0.755393897389701,0.675022500231806,2.70192721934532,3.17199686288943,3.10656187051092,0,1.59609949360412,0.682934423016537,0.243106717068294,0.209613162627982,0,1.11123363900808,1.85431551515005,1.28367683836726,0.252697211763798,1.01391719956096,1.88626341386076,1.591905626988,0.448176066834085,0.918967503289812,0.952587382566147,0.811190281613988,1.35036454324594,0.824171801606613,0.883193520806384,1.71434626192708,0.532427418478012,0.953744759789284,2.0348498328526,1.50575008664529,1.26921911837515,1.09756783723664,0.526139422875686,0.814824683075171,0.561142271657738,0.949080144993393,1.18205378850676,1.63692417267876,0.619747364743864,0.771626443924566,0.999242311751784,0.701794825336225,0.429742108096597,2.10417165275728,1.98532277207564,2.31867835620421 | |||
|short_description=p3@Tmtc1 | |||
}} |
Revision as of 09:25, 14 September 2013
Short description: | p3@Tmtc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tmtc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3553 |
Association with transcript: | 48bp_to_NM_198967, uc009eti.2, uc009etj.2_5end |
EntrezGene: | Tmtc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 1.13e-10 | 122 |
tube | 1.27e-10 | 114 |
regional part of nervous system | 6.71e-10 | 54 |
neural tube | 1.68e-09 | 52 |
neural rod | 1.68e-09 | 52 |
future spinal cord | 1.68e-09 | 52 |
neural keel | 1.68e-09 | 52 |
lung | 1.17e-08 | 14 |
respiratory tube | 1.17e-08 | 14 |
respiration organ | 1.17e-08 | 14 |
pair of lungs | 1.17e-08 | 14 |
lung primordium | 1.17e-08 | 14 |
lung bud | 1.17e-08 | 14 |
structure with developmental contribution from neural crest | 1.53e-08 | 92 |
brain | 3.83e-08 | 47 |
future brain | 3.83e-08 | 47 |
regional part of brain | 1.73e-07 | 46 |
anterior neural tube | 4.64e-07 | 40 |
neurectoderm | 5.59e-07 | 64 |
neural plate | 5.59e-07 | 64 |
presumptive neural plate | 5.59e-07 | 64 |
regional part of forebrain | 9.08e-07 | 39 |
forebrain | 9.08e-07 | 39 |
future forebrain | 9.08e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.