FFCP PHASE1:Mm9::chr6:17257878..17257893,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12389|HGNC=|MCL_coexpression_id=619|UniProt=P49817|association_with_transcript=155bp_to_ENSMUST00000133065,uc009azp.1_5end|description=CAGE_peak_7_at_Cav1_5end|id=chr6:17257878..17257893,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!3.86e-10!23;UBERON:0001009!3.86e-10!23;UBERON:0004872!4.02e-08!33;UBERON:0005153!3.47e-07!17;UBERON:0007100!4.23e-07!18;UBERON:0000948!4.23e-07!18;UBERON:0005498!4.23e-07!18;UBERON:0004140!4.23e-07!18;UBERON:0009881!4.23e-07!18;UBERON:0004141!4.23e-07!18;UBERON:0003084!4.23e-07!18;UBERON:0007005!4.23e-07!18;UBERON:0004139!4.23e-07!18;UBERON:0004291!4.23e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.90e-12,23;UBERON:0001009,2.90e-12,23;UBERON:0004872,1.53e-08,33;UBERON:0007100,3.16e-08,18;UBERON:0000948,3.16e-08,18;UBERON:0005498,3.16e-08,18;UBERON:0004140,3.16e-08,18;UBERON:0009881,3.16e-08,18;UBERON:0004141,3.16e-08,18;UBERON:0003084,3.16e-08,18;UBERON:0007005,3.16e-08,18;UBERON:0004139,3.16e-08,18;UBERON:0004291,3.16e-08,18|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.42791226055906,7.60326984146359,4.58866880404204,1.56478268869608,1.96222640742402,2.41654801007919,3.88859798148567,1.95980990275508,1.43752564364972,0,0,0,2.57259436035947,1.71920063963254,4.12537673821954,0,0,0,0.677689064138264,0.889294796111139,0,0,0,0,0.384218305321555,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0,3.40767869999328,1.058001841495,2.6087803983151,0,0,0,0,0,0.702222100658759,4.4311883870295,4.41636207824877,3.18005617059306,0,1.28326477414318,0,0,0.216491041011214,1.01343946190039,2.02209778005913,0.22836775943812,1.8125651855302,0.742210695324124,0.520455980298408,0.608930956624282,0.230615497256059,0.452167921657868,0.470354828542819,3.39299796590124,1.23597483867187,25.1602881040646,0,1.29413479957927,0.441683036920787,1.93950101254089,3.72783522436244,0,0.209446706813455,0.510914110417183,0,0,0,0.299581278809645,0,0,0.347648640384553,0,0,0.162241263067758,1.32391173005411,1.8661045591514,0,0.631325567659422,0,0,0,0.30140963567143,0.340182495756639,0.512454881139399,0.187403449119458,1.03481348295606,0,0.189106080167819,0,0,0,2.089512999133,2.46938563689532,0,0,0,0,1.86413195281952,0.234526059981096,1.44049649168812,0.473489471170421,1.96764231747404,2.00547246753592,3.48800917125612,2.41446061259657,3.26942958628075,1.81015834904829,3.447516745661,2.26992666728396,3.21639972335731,2.63460138349261,3.62357330653004,0,0,0,0.793351699990633,0.213288250535234,0,0.77320476793256,0.80673409849337,0.889512175379481,1.52180500890047,0.949058123089023,1.15289268306808,0.502670417600539,1.59165177632921,1.75467678407208,0.898819408654221,0.216138049874694,0.995706366271836,0.189667900953082,0,0,0.407302655690628,0.581857461502877,0.420814919341911,0.505892296994058,0.442830443938806,0.784993639206874,0.370191491765402,0,0,0.196558995113203,0,0,0,0,0.863088412352432,0.162135226775035,0.274561413188081,0,0,0,0,0,0,11.2699446001629,0.568474235311454,0.325929952884052,0.339490171550376,0.704070744865506,3.51763140627813,8.56957107189649,13.0739544064725,2.36452716159286,3.5434350343804,3.6674596791222,7.20998584749247,6.38934432903814,11.8612228036839,0,0,2.45882136509518,1.93155722413313,0,0,4.59017847054691,3.7870639080656,0,0,0,0,0,0,0,0.584511715822624,0,0,2.83880170416537,0.35613120733451,1.30309567482861,0.824850614862677,2.65490276679926,0,0.302323556964751,0.943025398779491,0.295301892880773,1.22974059177571,1.80899805217755,0.363533729477506,1.78248689192361,2.21225730555071,0,1.03135543248187,0.340439605753788,0,0,0.214337035031592,0,0.356737635204141,0.329098041204242,0.608929898229199,0.469343416127421,0.42366414172764,0.882113592219848,3.2977250588296,5.00539722757307,4.76472106932431,1.55184047204077,1.31312719796049,0.874442509889552,0.370850604021019,0,1.44470807574256,0.370389054739423,0.188368457004691,0.410082683163076,0,0,0,0,1.90934123603023,0.158167996790568,0.406638934253697,1.40406943068342,0.627264888043406,1.74690050996942,2.83215127408124,3.2234847732881,2.09404753587224,1.16653475962614,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.516639293910924,0.337912250981556,0.58678619322877,0.781226309063701,0.314578033277133,0.966336483304024,0.864090018773596,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0.596044064343795,0.240390899039938,0.590758108698309,0.100966449948148,0.15241361331,0.201652370273681,0.0974578807397524,0,0.116876902181569,2.26730383615211,0,0,0.335769232728157,6.76163579112667,5.81815673898664,1.09890974560359,1.92931541171159,2.00628841614145,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0.512200817262403,1.21553358534147,0,0.55153052535004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| ||
|EntrezGene=12389 | |||
|HGNC= | |||
|MCL_coexpression_id=619 | |||
|UniProt=P49817 | |||
|association_with_transcript=155bp_to_ENSMUST00000133065,uc009azp.1_5end | |||
|description=CAGE_peak_7_at_Cav1_5end | |||
|id=chr6:17257878..17257893,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.86e-10!23;UBERON:0001009!3.86e-10!23;UBERON:0004872!4.02e-08!33;UBERON:0005153!3.47e-07!17;UBERON:0007100!4.23e-07!18;UBERON:0000948!4.23e-07!18;UBERON:0005498!4.23e-07!18;UBERON:0004140!4.23e-07!18;UBERON:0009881!4.23e-07!18;UBERON:0004141!4.23e-07!18;UBERON:0003084!4.23e-07!18;UBERON:0007005!4.23e-07!18;UBERON:0004139!4.23e-07!18;UBERON:0004291!4.23e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,2.90e-12,23;UBERON:0001009,2.90e-12,23;UBERON:0004872,1.53e-08,33;UBERON:0007100,3.16e-08,18;UBERON:0000948,3.16e-08,18;UBERON:0005498,3.16e-08,18;UBERON:0004140,3.16e-08,18;UBERON:0009881,3.16e-08,18;UBERON:0004141,3.16e-08,18;UBERON:0003084,3.16e-08,18;UBERON:0007005,3.16e-08,18;UBERON:0004139,3.16e-08,18;UBERON:0004291,3.16e-08,18 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.42791226055906,7.60326984146359,4.58866880404204,1.56478268869608,1.96222640742402,2.41654801007919,3.88859798148567,1.95980990275508,1.43752564364972,0,0,0,2.57259436035947,1.71920063963254,4.12537673821954,0,0,0,0.677689064138264,0.889294796111139,0,0,0,0,0.384218305321555,0,0,0,0,0,0.122490799214954,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0,3.40767869999328,1.058001841495,2.6087803983151,0,0,0,0,0,0.702222100658759,4.4311883870295,4.41636207824877,3.18005617059306,0,1.28326477414318,0,0,0.216491041011214,1.01343946190039,2.02209778005913,0.22836775943812,1.8125651855302,0.742210695324124,0.520455980298408,0.608930956624282,0.230615497256059,0.452167921657868,0.470354828542819,3.39299796590124,1.23597483867187,25.1602881040646,0,1.29413479957927,0.441683036920787,1.93950101254089,3.72783522436244,0,0.209446706813455,0.510914110417183,0,0,0,0.299581278809645,0,0,0.347648640384553,0,0,0.162241263067758,1.32391173005411,1.8661045591514,0,0.631325567659422,0,0,0,0.30140963567143,0.340182495756639,0.512454881139399,0.187403449119458,1.03481348295606,0,0.189106080167819,0,0,0,2.089512999133,2.46938563689532,0,0,0,0,1.86413195281952,0.234526059981096,1.44049649168812,0.473489471170421,1.96764231747404,2.00547246753592,3.48800917125612,2.41446061259657,3.26942958628075,1.81015834904829,3.447516745661,2.26992666728396,3.21639972335731,2.63460138349261,3.62357330653004,0,0,0,0.793351699990633,0.213288250535234,0,0.77320476793256,0.80673409849337,0.889512175379481,1.52180500890047,0.949058123089023,1.15289268306808,0.502670417600539,1.59165177632921,1.75467678407208,0.898819408654221,0.216138049874694,0.995706366271836,0.189667900953082,0,0,0.407302655690628,0.581857461502877,0.420814919341911,0.505892296994058,0.442830443938806,0.784993639206874,0.370191491765402,0,0,0.196558995113203,0,0,0,0,0.863088412352432,0.162135226775035,0.274561413188081,0,0,0,0,0,0,11.2699446001629,0.568474235311454,0.325929952884052,0.339490171550376,0.704070744865506,3.51763140627813,8.56957107189649,13.0739544064725,2.36452716159286,3.5434350343804,3.6674596791222,7.20998584749247,6.38934432903814,11.8612228036839,0,0,2.45882136509518,1.93155722413313,0,0,4.59017847054691,3.7870639080656,0,0,0,0,0,0,0,0.584511715822624,0,0,2.83880170416537,0.35613120733451,1.30309567482861,0.824850614862677,2.65490276679926,0,0.302323556964751,0.943025398779491,0.295301892880773,1.22974059177571,1.80899805217755,0.363533729477506,1.78248689192361,2.21225730555071,0,1.03135543248187,0.340439605753788,0,0,0.214337035031592,0,0.356737635204141,0.329098041204242,0.608929898229199,0.469343416127421,0.42366414172764,0.882113592219848,3.2977250588296,5.00539722757307,4.76472106932431,1.55184047204077,1.31312719796049,0.874442509889552,0.370850604021019,0,1.44470807574256,0.370389054739423,0.188368457004691,0.410082683163076,0,0,0,0,1.90934123603023,0.158167996790568,0.406638934253697,1.40406943068342,0.627264888043406,1.74690050996942,2.83215127408124,3.2234847732881,2.09404753587224,1.16653475962614,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.516639293910924,0.337912250981556,0.58678619322877,0.781226309063701,0.314578033277133,0.966336483304024,0.864090018773596,0,0.202725215290164,0.205421914329655,0.129920822977795,0.179026695667481,0.596044064343795,0.240390899039938,0.590758108698309,0.100966449948148,0.15241361331,0.201652370273681,0.0974578807397524,0,0.116876902181569,2.26730383615211,0,0,0.335769232728157,6.76163579112667,5.81815673898664,1.09890974560359,1.92931541171159,2.00628841614145,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0.512200817262403,1.21553358534147,0,0.551530525350042,2.22246727801615,1.44224540067226,1.60459604795908,2.77966932940177,1.77435509923168,2.45214243801899,2.1537546718073,2.4969809437899,2.87177344778066,1.90517476513229,1.85414921511769,1.54327376370964,0.412085900803307,1.76638704161277,1.71434626192708,2.48466128623072,2.86123427936785,1.59881058295561,1.69396884747595,1.4384483341585,1.82927972872773,0.526139422875686,3.80251518768413,3.36685362994643,2.72860541685601,2.06859412988683,0.818462086339379,2.47898945897546,1.92906610981141,1.24905288968973,2.10538447600868,3.00819475667618,7.26895661861605,3.97064554415128,2.78241402744506 | |||
|short_description=p7@Cav1 | |||
}} |
Revision as of 09:27, 14 September 2013
Short description: | p7@Cav1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Cav1_5end |
Coexpression cluster: | MCL_coexpression_mm9:619 |
Association with transcript: | 155bp_to_ENSMUST00000133065, uc009azp.1_5end |
EntrezGene: | Cav1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 2.90e-12 | 23 |
circulatory system | 2.90e-12 | 23 |
splanchnic layer of lateral plate mesoderm | 1.53e-08 | 33 |
primary circulatory organ | 3.16e-08 | 18 |
heart | 3.16e-08 | 18 |
primitive heart tube | 3.16e-08 | 18 |
primary heart field | 3.16e-08 | 18 |
anterior lateral plate mesoderm | 3.16e-08 | 18 |
heart tube | 3.16e-08 | 18 |
heart primordium | 3.16e-08 | 18 |
cardiac mesoderm | 3.16e-08 | 18 |
cardiogenic plate | 3.16e-08 | 18 |
heart rudiment | 3.16e-08 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.