FFCP PHASE1:Mm9::chr7:51731862..51731891,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=45|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:51731862..51731891,+|id=chr7:51731862..51731891,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!9.04e-10!18;UBERON:0000948!9.04e-10!18;UBERON:0005498!9.04e-10!18;UBERON:0004140!9.04e-10!18;UBERON:0009881!9.04e-10!18;UBERON:0004141!9.04e-10!18;UBERON:0003084!9.04e-10!18;UBERON:0007005!9.04e-10!18;UBERON:0004139!9.04e-10!18;UBERON:0004291!9.04e-10!18;UBERON:0004535!2.55e-07!23;UBERON:0001009!2.55e-07!23;UBERON:0003102!3.78e-07!23;UBERON:0001048!4.86e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.81e-12,18;UBERON:0000948,1.81e-12,18;UBERON:0005498,1.81e-12,18;UBERON:0004140,1.81e-12,18;UBERON:0009881,1.81e-12,18;UBERON:0004141,1.81e-12,18;UBERON:0003084,1.81e-12,18;UBERON:0007005,1.81e-12,18;UBERON:0004139,1.81e-12,18;UBERON:0004291,1.81e-12,18;UBERON:0004535,2.40e-09,23;UBERON:0001009,2.40e-09,23;UBERON:0003102,1.37e-08,22;UBERON:0005153,4.60e-07,17;UBERON:0001048,5.41e-07,134;UBERON:0000026,6.18e-07,12;UBERON:0004708,6.18e-07,12;UBERON:0002101,6.18e-07,12;UBERON:0004357,6.18e-07,12;UBERON:0004347,6.18e-07,12;UBERON:0005732,6.18e-07,12;UBERON:0005733,6.18e-07,12;UBERON:0002048,7.07e-07,14;UBERON:0000117,7.07e-07,14;UBERON:0000171,7.07e-07,14;UBERON:0000170,7.07e-07,14;UBERON:0005597,7.07e-07,14;UBERON:0000118,7.07e-07,14|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0.159544317990673,0,0.0874204024189974,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,1.12355536105401,0,0.259786004602869,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.867426633830679,0.304465478312141,0.461230994512117,0,1.41106448562846,0,0,1.01219549843938,0,45.7800185351168,45.7141943213015,11.6370060752453,0,0.292780797011547,0,0,0,0,0,0.449371918214468,0,0.125654352112864,0,0,0.20778804455956,0.324482526135515,0.101839363850316,1.24406970610093,0,2.10441855886474,1.56144531555244,0.689706313300419,1.0803727788321,7.38453607395004,5.57899293040888,3.71529788826064,1.21812241927647,2.58703370739016,0.862271971731369,6.61871280587367,7.5658983390498,3.5071317188412,8.89751197521913,24.3776516565517,11.3180175024369,0.199034266818493,0,0,0,202.983257084792,322.473332474007,172.13933075673,263.733635441924,272.518460970154,225.075717702685,203.467201656607,87.7254022576755,142.687248372681,71.254415012537,91.441277492056,21.1589592914683,21.3451981640985,13.8316572633362,15.165325319922,0.420579897128254,0,0.330418782983798,0,0.639864751605702,0.696710015581316,0.644337306610467,0,0,0.380451252225118,0,0,0,0,0.19496408711912,0,0,0,0,1.5994791765362,0,2.44381593414377,0,0.0701358198903186,0.0632365371242573,0,0,0,0,5.5058884886311,2.16214894624523,0.674586337154561,0.405720242777006,0.482354319504834,0.50925170356284,0,0,0.274561413188081,4.31304619582064,0,1.24815069245824,0,0.358794827043824,0,0.739012760666419,6.44270800019648,10.5927234687317,8.31750920298422,7.51008794523207,9.38035041674168,6.9032655856944,4.48807390072937,2.83743259391144,5.3151525515706,2.23236676120482,1.63863314715738,3.28101465545202,1.15719246865209,0,0,2.95058563811422,5.79467167239938,0.80275294993896,0.117211686592203,0,26.2569764292548,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0.35613120733451,0,0.494910368917606,0,0.971122544619926,0.906970670894253,0.754420319023592,0,0,0,0.363533729477506,2.85197902707777,0,0,0,0,0.36012218806262,0,0,0.532020700926821,0,0,0,0,0,0.220528398054962,6.76033637060068,11.3025098687134,6.87567344180977,1.19372344003136,1.14898629821543,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.216010681643603,0.418176592028937,0.655087691238533,0.134864346384821,0.991841468704031,0.785267825952089,0.388844919875379,9.94142900939081,0.56369293868419,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0.483168241652012,3.16833006883652,0,0.202725215290164,1.43795340030758,1.94881234466693,1.79026695667481,2.38417625737518,0.120195449519969,0,0.403865799792591,0.15241361331,0.302478555410522,0.194915761479505,0.192423683280659,0.233753804363138,27.6611068010558,0,0,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,0,0,0.572895513439397,0,0,0.755393897389701,0,0,0,0,2.17953429926771,6.78342284781753,11.2684179797729,24.5537784238977,2.72497111416377,0.551530525350042,12.6680634846921,7.82933217507798,8.3438994493872,7.32821914115013,6.59046179714623,5.09291121742406,6.367622507952,5.69823856403337,5.97328877138378,4.76293691283074,4.05595140806994,4.82273051159263,5.76920261124629,3.23837624295674,8.22886205724997,9.76116933876356,5.24559617884106,8.57543858130738,4.98779716201252,7.61531471025089,6.40247905054704,7.89209134313529,5.43216455383447,9.53941861818155,8.54172130494054,4.13718825977367,4.09231043169689,7.2820315357404,22.5700734847935,12.4905288968973,41.8737579117281,29.0075922965203,56.23876962824,23.8238732649077,22.4911800551809|short_description=p@chr7:51731862..51731891,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=45 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:51731862..51731891,+ | |||
|id=chr7:51731862..51731891,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!9.04e-10!18;UBERON:0000948!9.04e-10!18;UBERON:0005498!9.04e-10!18;UBERON:0004140!9.04e-10!18;UBERON:0009881!9.04e-10!18;UBERON:0004141!9.04e-10!18;UBERON:0003084!9.04e-10!18;UBERON:0007005!9.04e-10!18;UBERON:0004139!9.04e-10!18;UBERON:0004291!9.04e-10!18;UBERON:0004535!2.55e-07!23;UBERON:0001009!2.55e-07!23;UBERON:0003102!3.78e-07!23;UBERON:0001048!4.86e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.81e-12,18;UBERON:0000948,1.81e-12,18;UBERON:0005498,1.81e-12,18;UBERON:0004140,1.81e-12,18;UBERON:0009881,1.81e-12,18;UBERON:0004141,1.81e-12,18;UBERON:0003084,1.81e-12,18;UBERON:0007005,1.81e-12,18;UBERON:0004139,1.81e-12,18;UBERON:0004291,1.81e-12,18;UBERON:0004535,2.40e-09,23;UBERON:0001009,2.40e-09,23;UBERON:0003102,1.37e-08,22;UBERON:0005153,4.60e-07,17;UBERON:0001048,5.41e-07,134;UBERON:0000026,6.18e-07,12;UBERON:0004708,6.18e-07,12;UBERON:0002101,6.18e-07,12;UBERON:0004357,6.18e-07,12;UBERON:0004347,6.18e-07,12;UBERON:0005732,6.18e-07,12;UBERON:0005733,6.18e-07,12;UBERON:0002048,7.07e-07,14;UBERON:0000117,7.07e-07,14;UBERON:0000171,7.07e-07,14;UBERON:0000170,7.07e-07,14;UBERON:0005597,7.07e-07,14;UBERON:0000118,7.07e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0.159544317990673,0,0.0874204024189974,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,1.12355536105401,0,0.259786004602869,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.867426633830679,0.304465478312141,0.461230994512117,0,1.41106448562846,0,0,1.01219549843938,0,45.7800185351168,45.7141943213015,11.6370060752453,0,0.292780797011547,0,0,0,0,0,0.449371918214468,0,0.125654352112864,0,0,0.20778804455956,0.324482526135515,0.101839363850316,1.24406970610093,0,2.10441855886474,1.56144531555244,0.689706313300419,1.0803727788321,7.38453607395004,5.57899293040888,3.71529788826064,1.21812241927647,2.58703370739016,0.862271971731369,6.61871280587367,7.5658983390498,3.5071317188412,8.89751197521913,24.3776516565517,11.3180175024369,0.199034266818493,0,0,0,202.983257084792,322.473332474007,172.13933075673,263.733635441924,272.518460970154,225.075717702685,203.467201656607,87.7254022576755,142.687248372681,71.254415012537,91.441277492056,21.1589592914683,21.3451981640985,13.8316572633362,15.165325319922,0.420579897128254,0,0.330418782983798,0,0.639864751605702,0.696710015581316,0.644337306610467,0,0,0.380451252225118,0,0,0,0,0.19496408711912,0,0,0,0,1.5994791765362,0,2.44381593414377,0,0.0701358198903186,0.0632365371242573,0,0,0,0,5.5058884886311,2.16214894624523,0.674586337154561,0.405720242777006,0.482354319504834,0.50925170356284,0,0,0.274561413188081,4.31304619582064,0,1.24815069245824,0,0.358794827043824,0,0.739012760666419,6.44270800019648,10.5927234687317,8.31750920298422,7.51008794523207,9.38035041674168,6.9032655856944,4.48807390072937,2.83743259391144,5.3151525515706,2.23236676120482,1.63863314715738,3.28101465545202,1.15719246865209,0,0,2.95058563811422,5.79467167239938,0.80275294993896,0.117211686592203,0,26.2569764292548,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0.35613120733451,0,0.494910368917606,0,0.971122544619926,0.906970670894253,0.754420319023592,0,0,0,0.363533729477506,2.85197902707777,0,0,0,0,0.36012218806262,0,0,0.532020700926821,0,0,0,0,0,0.220528398054962,6.76033637060068,11.3025098687134,6.87567344180977,1.19372344003136,1.14898629821543,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.216010681643603,0.418176592028937,0.655087691238533,0.134864346384821,0.991841468704031,0.785267825952089,0.388844919875379,9.94142900939081,0.56369293868419,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0.483168241652012,3.16833006883652,0,0.202725215290164,1.43795340030758,1.94881234466693,1.79026695667481,2.38417625737518,0.120195449519969,0,0.403865799792591,0.15241361331,0.302478555410522,0.194915761479505,0.192423683280659,0.233753804363138,27.6611068010558,0,0,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,0,0,0.572895513439397,0,0,0.755393897389701,0,0,0,0,2.17953429926771,6.78342284781753,11.2684179797729,24.5537784238977,2.72497111416377,0.551530525350042,12.6680634846921,7.82933217507798,8.3438994493872,7.32821914115013,6.59046179714623,5.09291121742406,6.367622507952,5.69823856403337,5.97328877138378,4.76293691283074,4.05595140806994,4.82273051159263,5.76920261124629,3.23837624295674,8.22886205724997,9.76116933876356,5.24559617884106,8.57543858130738,4.98779716201252,7.61531471025089,6.40247905054704,7.89209134313529,5.43216455383447,9.53941861818155,8.54172130494054,4.13718825977367,4.09231043169689,7.2820315357404,22.5700734847935,12.4905288968973,41.8737579117281,29.0075922965203,56.23876962824,23.8238732649077,22.4911800551809 | |||
|short_description=p@chr7:51731862..51731891,+ | |||
}} |
Revision as of 13:37, 14 September 2013
Short description: | p@chr7:51731862..51731891, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:51731862..51731891, + |
Coexpression cluster: | MCL_coexpression_mm9:45 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.81e-12 | 18 |
heart | 1.81e-12 | 18 |
primitive heart tube | 1.81e-12 | 18 |
primary heart field | 1.81e-12 | 18 |
anterior lateral plate mesoderm | 1.81e-12 | 18 |
heart tube | 1.81e-12 | 18 |
heart primordium | 1.81e-12 | 18 |
cardiac mesoderm | 1.81e-12 | 18 |
cardiogenic plate | 1.81e-12 | 18 |
heart rudiment | 1.81e-12 | 18 |
cardiovascular system | 2.40e-09 | 23 |
circulatory system | 2.40e-09 | 23 |
surface structure | 1.37e-08 | 22 |
epithelial bud | 4.60e-07 | 17 |
primordium | 5.41e-07 | 134 |
appendage | 6.18e-07 | 12 |
paired limb/fin | 6.18e-07 | 12 |
limb | 6.18e-07 | 12 |
paired limb/fin bud | 6.18e-07 | 12 |
limb bud | 6.18e-07 | 12 |
limb/fin field | 6.18e-07 | 12 |
limb field | 6.18e-07 | 12 |
lung | 7.07e-07 | 14 |
respiratory tube | 7.07e-07 | 14 |
respiration organ | 7.07e-07 | 14 |
pair of lungs | 7.07e-07 | 14 |
lung primordium | 7.07e-07 | 14 |
lung bud | 7.07e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.