FFCP PHASE1:Mm9::chr8:125202030..125202082,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12398|HGNC=|MCL_coexpression_id=23|UniProt=E9QM80,O54972,B7ZP57|association_with_transcript=0bp_to_ENSMUST00000064674,NM_001109873,NM_177289,uc009ntl.2,uc009ntm.2_5end|description=CAGE_peak_1_at_Cbfa2t3_5end|id=chr8:125202030..125202082,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!5.06e-10!333;UBERON:0001045!2.06e-08!13;UBERON:0000922!6.26e-08!328;UBERON:0001264!7.78e-08!12;UBERON:0003922!7.78e-08!12;UBERON:0002114!7.78e-08!12;UBERON:0003923!7.78e-08!12;UBERON:0003924!7.78e-08!12;UBERON:0003921!7.78e-08!12;UBERON:0002020!8.06e-08!34;UBERON:0002791!6.38e-07!29;UBERON:0003528!6.38e-07!29;UBERON:0001893!6.38e-07!29;UBERON:0002075!7.67e-07!19|ontology_enrichment_uberon_v019_2=UBERON:0001264,7.20e-08,12;UBERON:0002020,7.30e-08,34;UBERON:0000073,4.66e-07,54;UBERON:0003528,5.84e-07,29;UBERON:0002791,5.84e-07,29;UBERON:0001893,5.84e-07,29;UBERON:0002075,7.19e-07,19|phase1_expression=2.5623815536767,1.74487703819681,0.454999239389536,0,0,8.39396359559449,11.4470193891808,0.387369970324729,0.422366166455,2.10658073689794,0,0,0,0.174840804837995,3.66420737997229,5.87178275430495,0.699561878128147,1.57731082679119,2.33094537129756,1.27316895539409,16.0731818385522,0,0,3.67982572424835,2.2940928106717,0.57423196411502,1.29228598847722,3.44753972297422,4.18051522804023,4.53654233567875,4.8780712344167,0,0,0,0.577703239502549,0.664938581433969,0.612508068787107,0.418531630736908,0,0,0.588231488031014,0,0.971020706062307,0.377690453926732,0.304130793658544,0,0,0.218025156380447,0.439372365468944,0,0,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0.573066879877513,0,17.3992156339254,16.9277113367051,16.4796164911607,0,0,0.449949858640699,0.988866362566974,1.4209602298922,0.599200221036809,0,9.85051316930538,10.2604513132085,9.88527318351495,6.28432165688368,8.61387309711293,11.2691535277758,13.1308295294984,14.7075005857603,11.0115880999389,8.68273898979276,10.5988507946808,15.6944682398931,16.8337264228434,18.7528813400434,8.93385596804419,3.93933827022176,5.19514042441154,10.9012576625257,10.9626194215309,17.8943467992289,0.151452386666368,0.453429360640713,34.4938741554997,3.44169550792555,4.0798280022465,0,0,0.448026887097336,7.5839986871146,0,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,5.709193985953,13.7237078333001,14.1020032111584,2.08182392119363,2.74018930480927,2.7673859670727,2.71300752994721,5.64425794251383,10.8073268543521,5.19109432242185,21.1115061103071,11.4999371753484,6.30890714794896,11.4837589599405,12.6067565815158,26.0948465705371,58.848940199321,61.1584383895289,14.0501380364725,2.51611761462433,0,0.889491589511453,13.1815762676244,10.980014467647,9.67538511269056,13.7321212951898,9.97290283588289,7.89594569326328,8.76102820565891,3.97173519016234,5.97153458928446,2.0217820674694,7.15502310014011,2.99277018814219,1.60931473103431,3.60124259610698,2.71268672104287,3.26575195926374,3.58718416797579,1.59292931751539,7.50239775143145,5.6047678162539,3.78212160335639,2.63926686245923,3.28793598641362,4.72680323683516,6.268538997399,3.08673204611915,3.58261680273288,0.702213187313235,1.02939162845886,0.852490498186778,2.07125772535502,4.45599513964083,5.04173772090842,3.55117103377815,6.09969118416952,5.55361606394562,5.58081467400979,6.43856163359086,8.75740067753771,10.6963902443762,15.1034066952768,25.1313309592153,21.9299981137998,19.1008600303214,20.936201326618,22.2907345477975,11.4224119741006,5.61711931072457,4.7601101999438,1.70630600428187,1.62565670302307,6.44337306610467,7.26060688644033,3.55804870151792,7.41879941838981,12.8122846617018,7.24675400785648,9.80207314321051,7.56034593756373,10.3330966173134,13.4822911298133,5.83572734661674,9.35963984295526,3.60369011810855,2.05647322697512,5.63538678365402,4.2766778847516,5.04276466635827,7.85521182771568,9.61195364288711,9.88987991463334,8.63493003127561,6.91024117962083,2.37162101669719,3.00321190288969,4.12773889737726,4.27238013531222,6.49152388443209,4.82354319504834,4.07401362850272,2.5892652370573,1.78348749452539,0.823684239564244,4.31304619582064,5.58211421502755,2.49630138491648,1.76805214562978,1.07638448113147,1.92977408545347,45.6340379711514,2.84237117655727,3.42226450528254,3.90413697282933,7.04070744865506,12.730475565578,21.4239276797412,31.2213836572478,27.9014205067958,28.1260155853944,33.8044109553873,45.5540014909752,35.2277363006427,38.6212986412636,1.50791283939272,0,3.44234991113325,3.03530420935206,4.81651769963376,5.62616095642575,0,14.895784705058,1.26203287766503,2.34263246577983,3.87762115919038,0,1.11399337041197,2.26461224631066,1.61924280669958,1.46127928955656,3.55759000151871,6.74774764485795,12.4907274983276,5.52003371368491,4.56083486190013,12.8676695918578,180.533388142349,8.49732226542435,10.2790009368015,23.3870298897314,52.2684350398968,39.3516989368227,23.0001180919717,29.4462320876779,27.4502981356235,94.494990622809,132.827446804498,134.076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| ||
|EntrezGene=12398 | |||
|HGNC= | |||
|MCL_coexpression_id=23 | |||
|UniProt=E9QM80,O54972,B7ZP57 | |||
|association_with_transcript=0bp_to_ENSMUST00000064674,NM_001109873,NM_177289,uc009ntl.2,uc009ntm.2_5end | |||
|description=CAGE_peak_1_at_Cbfa2t3_5end | |||
|id=chr8:125202030..125202082,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!5.06e-10!333;UBERON:0001045!2.06e-08!13;UBERON:0000922!6.26e-08!328;UBERON:0001264!7.78e-08!12;UBERON:0003922!7.78e-08!12;UBERON:0002114!7.78e-08!12;UBERON:0003923!7.78e-08!12;UBERON:0003924!7.78e-08!12;UBERON:0003921!7.78e-08!12;UBERON:0002020!8.06e-08!34;UBERON:0002791!6.38e-07!29;UBERON:0003528!6.38e-07!29;UBERON:0001893!6.38e-07!29;UBERON:0002075!7.67e-07!19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,7.20e-08,12;UBERON:0002020,7.30e-08,34;UBERON:0000073,4.66e-07,54;UBERON:0003528,5.84e-07,29;UBERON:0002791,5.84e-07,29;UBERON:0001893,5.84e-07,29;UBERON:0002075,7.19e-07,19 | |||
|phase1_expression=2.5623815536767,1.74487703819681,0.454999239389536,0,0,8.39396359559449,11.4470193891808,0.387369970324729,0.422366166455,2.10658073689794,0,0,0,0.174840804837995,3.66420737997229,5.87178275430495,0.699561878128147,1.57731082679119,2.33094537129756,1.27316895539409,16.0731818385522,0,0,3.67982572424835,2.2940928106717,0.57423196411502,1.29228598847722,3.44753972297422,4.18051522804023,4.53654233567875,4.8780712344167,0,0,0,0.577703239502549,0.664938581433969,0.612508068787107,0.418531630736908,0,0,0.588231488031014,0,0.971020706062307,0.377690453926732,0.304130793658544,0,0,0.218025156380447,0.439372365468944,0,0,0,0.335565212115473,0.725362142011344,0.336093799142464,0,0.573066879877513,0,17.3992156339254,16.9277113367051,16.4796164911607,0,0,0.449949858640699,0.988866362566974,1.4209602298922,0.599200221036809,0,9.85051316930538,10.2604513132085,9.88527318351495,6.28432165688368,8.61387309711293,11.2691535277758,13.1308295294984,14.7075005857603,11.0115880999389,8.68273898979276,10.5988507946808,15.6944682398931,16.8337264228434,18.7528813400434,8.93385596804419,3.93933827022176,5.19514042441154,10.9012576625257,10.9626194215309,17.8943467992289,0.151452386666368,0.453429360640713,34.4938741554997,3.44169550792555,4.0798280022465,0,0,0.448026887097336,7.5839986871146,0,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,5.709193985953,13.7237078333001,14.1020032111584,2.08182392119363,2.74018930480927,2.7673859670727,2.71300752994721,5.64425794251383,10.8073268543521,5.19109432242185,21.1115061103071,11.4999371753484,6.30890714794896,11.4837589599405,12.6067565815158,26.0948465705371,58.848940199321,61.1584383895289,14.0501380364725,2.51611761462433,0,0.889491589511453,13.1815762676244,10.980014467647,9.67538511269056,13.7321212951898,9.97290283588289,7.89594569326328,8.76102820565891,3.97173519016234,5.97153458928446,2.0217820674694,7.15502310014011,2.99277018814219,1.60931473103431,3.60124259610698,2.71268672104287,3.26575195926374,3.58718416797579,1.59292931751539,7.50239775143145,5.6047678162539,3.78212160335639,2.63926686245923,3.28793598641362,4.72680323683516,6.268538997399,3.08673204611915,3.58261680273288,0.702213187313235,1.02939162845886,0.852490498186778,2.07125772535502,4.45599513964083,5.04173772090842,3.55117103377815,6.09969118416952,5.55361606394562,5.58081467400979,6.43856163359086,8.75740067753771,10.6963902443762,15.1034066952768,25.1313309592153,21.9299981137998,19.1008600303214,20.936201326618,22.2907345477975,11.4224119741006,5.61711931072457,4.7601101999438,1.70630600428187,1.62565670302307,6.44337306610467,7.26060688644033,3.55804870151792,7.41879941838981,12.8122846617018,7.24675400785648,9.80207314321051,7.56034593756373,10.3330966173134,13.4822911298133,5.83572734661674,9.35963984295526,3.60369011810855,2.05647322697512,5.63538678365402,4.2766778847516,5.04276466635827,7.85521182771568,9.61195364288711,9.88987991463334,8.63493003127561,6.91024117962083,2.37162101669719,3.00321190288969,4.12773889737726,4.27238013531222,6.49152388443209,4.82354319504834,4.07401362850272,2.5892652370573,1.78348749452539,0.823684239564244,4.31304619582064,5.58211421502755,2.49630138491648,1.76805214562978,1.07638448113147,1.92977408545347,45.6340379711514,2.84237117655727,3.42226450528254,3.90413697282933,7.04070744865506,12.730475565578,21.4239276797412,31.2213836572478,27.9014205067958,28.1260155853944,33.8044109553873,45.5540014909752,35.2277363006427,38.6212986412636,1.50791283939272,0,3.44234991113325,3.03530420935206,4.81651769963376,5.62616095642575,0,14.895784705058,1.26203287766503,2.34263246577983,3.87762115919038,0,1.11399337041197,2.26461224631066,1.61924280669958,1.46127928955656,3.55759000151871,6.74774764485795,12.4907274983276,5.52003371368491,4.56083486190013,12.8676695918578,180.533388142349,8.49732226542435,10.2790009368015,23.3870298897314,52.2684350398968,39.3516989368227,23.0001180919717,29.4462320876779,27.4502981356235,94.494990622809,132.827446804498,134.076206222643,11.5749465956288,3.42116078659489,2.8458910432206,3.00071849044229,3.54680467284547,5.35106452806212,3.9491764944509,7.91608867697958,3.98941903708308,3.1774810629573,1.54369878638473,12.2015827176695,5.48979050766079,3.61877549568935,3.81991500810037,4.10352249362653,10.7847909553045,6.67531087237835,11.1066072518604,4.95328483111734,2.77791791054568,5.27431679613135,10.3887613067979,11.2101304871196,1.86976272993241,1.53946597556024,1.93479963326193,12.4107180341965,1.89801596148681,6.91286188231286,3.88819226958485,3.97267762427491,5.67742665740062,3.50647300600534,7.27350410382956,3.40282724579238,5.83267379813068,0.621339313086926,0,2.99033092087958,2.31641886639937,3.69457257853691,7.62042958518613,10.9821481569006,16.8994423649886,16.4057524903377,8.38874755405687,2.41584120826006,0.864090018773596,14.8525226695244,6.48720688928525,6.47079030138412,6.75588279484534,8.23522800070415,10.9274745129696,7.3319224207181,10.1905773750458,10.5005107946074,7.77309427880998,10.4859232542314,14.61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| |||
|short_description=p1@Cbfa2t3 | |||
}} | |||
Revision as of 15:01, 14 September 2013
| Short description: | p1@Cbfa2t3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Cbfa2t3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:23 |
| Association with transcript: | 0bp_to_ENSMUST00000064674, NM_001109873, NM_177289, uc009ntl.2, uc009ntm.2_5end |
| EntrezGene: | Cbfa2t3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| pancreas | 7.20e-08 | 12 |
| gray matter | 7.30e-08 | 34 |
| regional part of nervous system | 4.66e-07 | 54 |
| brain grey matter | 5.84e-07 | 29 |
| regional part of telencephalon | 5.84e-07 | 29 |
| telencephalon | 5.84e-07 | 29 |
| viscus | 7.19e-07 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
