FFCP PHASE1:Mm9::chr8:56040379..56040390,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=234267|HGNC=|MCL_coexpression_id=2|UniProt=P35802,Q542P2|association_with_transcript=298bp_to_ENSMUST00000033915,NM_001253756,NM_153581,uc009lsl.2_5end|description=CAGE_peak_10_at_Gpm6a_5end|id=chr8:56040379..56040390,+|ontology_enrichment_celltype=CL:0000117!1.66e-17!23;CL:0000337!1.66e-17!23;CL:0000540!1.10e-10!33;CL:0000047!1.10e-10!33;CL:0000031!1.10e-10!33;CL:0000404!1.10e-10!33;CL:0000393!6.76e-08!39;CL:0000211!6.76e-08!39;CL:0002319!1.13e-07!43;CL:0000221!2.48e-07!44;CL:0000133!2.48e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,3.01e-20,23;CL:0000337,3.01e-20,23;CL:0000540,4.02e-12,33;CL:0000047,4.02e-12,33;CL:0000031,4.02e-12,33;CL:0000404,4.02e-12,33;CL:0000393,2.59e-09,39;CL:0000211,2.59e-09,39;CL:0002319,6.67e-08,43;CL:0000221,1.36e-07,44;CL:0000133,1.36e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.11e-32!52;UBERON:0005068!1.11e-32!52;UBERON:0006241!1.11e-32!52;UBERON:0007135!1.11e-32!52;UBERON:0000955!7.56e-31!50;UBERON:0006238!7.56e-31!50;UBERON:0002616!8.27e-30!49;UBERON:0002020!1.97e-29!34;UBERON:0000033!1.07e-28!63;UBERON:0001017!1.74e-27!73;UBERON:0005743!1.74e-27!73;UBERON:0002346!2.34e-27!71;UBERON:0003075!2.34e-27!71;UBERON:0007284!2.34e-27!71;UBERON:0000073!3.47e-27!75;UBERON:0001016!3.47e-27!75;UBERON:0003056!2.01e-26!49;UBERON:0003080!1.29e-25!40;UBERON:0002791!8.54e-25!29;UBERON:0003528!8.54e-25!29;UBERON:0001893!8.54e-25!29;UBERON:0002780!1.14e-24!39;UBERON:0001890!1.14e-24!39;UBERON:0006240!1.14e-24!39;UBERON:0004121!2.53e-20!102;UBERON:0000924!2.53e-20!102;UBERON:0006601!2.53e-20!102;UBERON:0000956!1.06e-17!21;UBERON:0001869!1.06e-17!21;UBERON:0000203!1.06e-17!21;UBERON:0007811!5.07e-17!86;UBERON:0002619!2.05e-14!17;UBERON:0000153!3.93e-14!94;UBERON:0002021!4.42e-12!10;UBERON:0000411!4.42e-12!10;UBERON:0001950!4.42e-12!10;UBERON:0002420!3.57e-08!8;UBERON:0007245!3.57e-08!8;UBERON:0010009!3.57e-08!8;UBERON:0010011!3.57e-08!8;UBERON:0000454!3.57e-08!8;UBERON:0003076!2.17e-07!12;UBERON:0003057!2.17e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.74e-34,54;UBERON:0002020,1.18e-33,34;UBERON:0001049,3.55e-32,52;UBERON:0005068,3.55e-32,52;UBERON:0006241,3.55e-32,52;UBERON:0007135,3.55e-32,52;UBERON:0001017,6.22e-28,73;UBERON:0003528,7.82e-28,29;UBERON:0002791,7.82e-28,29;UBERON:0001893,7.82e-28,29;UBERON:0000955,8.22e-27,47;UBERON:0006238,8.22e-27,47;UBERON:0001016,8.39e-27,75;UBERON:0002616,1.27e-25,46;UBERON:0002346,5.88e-25,64;UBERON:0003075,5.88e-25,64;UBERON:0007284,5.88e-25,64;UBERON:0003080,3.35e-23,40;UBERON:0002780,4.23e-22,39;UBERON:0001890,4.23e-22,39;UBERON:0006240,4.23e-22,39;UBERON:0010371,2.74e-20,73;UBERON:0004121,4.24e-19,95;UBERON:0000924,4.24e-19,95;UBERON:0006601,4.24e-19,95;UBERON:0000956,5.94e-19,21;UBERON:0001869,5.94e-19,21;UBERON:0000203,5.94e-19,21;UBERON:0003056,2.59e-18,49;UBERON:0002021,6.64e-15,10;UBERON:0000411,6.64e-15,10;UBERON:0001950,6.64e-15,10;UBERON:0002619,7.61e-15,17;UBERON:0010314,1.59e-13,92;UBERON:0002420,5.95e-10,8;UBERON:0007245,5.95e-10,8;UBERON:0010009,5.95e-10,8;UBERON:0010011,5.95e-10,8;UBERON:0000454,5.95e-10,8;UBERON:0003076,3.01e-09,12;UBERON:0003057,3.01e-09,12;UBERON:0000025,4.19e-08,114;UBERON:0002240,1.00e-07,6;UBERON:0005174,1.00e-07,6;UBERON:0001137,1.00e-07,6;UBERON:0004111,7.05e-07,122;UBERON:0001948,7.27e-07,5;UBERON:0002315,7.27e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,4.45096213891115,5.81890077199236,0,0,0,0,0,0,0,0,5.39185984004084,4.59020190327748,5.04779907243317,4.85606673486466,6.18431914664518,6.1245399607477,4.02550978276593,0.919218786610021,3.30347642998166,11.2364857514965,9.5236050618871,4.74790635828698,7.22752384459036,7.8137005583514,6.42120897703176,11.8180148106653,16.0438160165651,15.6153150301044,19.5049202694771,7.82877672466262,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.296793474485,15.0801628905688,0,0,0,0,11.6836698735762,14.640019290196,7.79056983099759,36.3292829201858,40.6587577155226,11.6361304953354,20.6046404096052,0,0,0,0.631325567659422,0,0,0.180062129805349,0.30140963567143,0.544291993210623,0.384341160854549,0.749613796477831,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.4361018216962,9.15851050175631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,3.98519734413491,0,0,0,0,0.430846795465598,0,0,0,0,0,0,16.0660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0.493647061806363,0,0,0,0,0,0,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.0399361043237,61.2232564554545,48.1232231289093,61.0078797320091,52.0662715025688,51.3667850224996,49.2766425169218,39.1779446805072,41.6891016265468,27.4412965228465,0,0.798049746802062,0.682934423016537,1.70174701947806,0.209613162627982,1.2869045591501,1.55572709461131,2.67845574410562,2.88827288632634,2.77966932940177,2.28131369901216,2.45214243801899,2.99652823903624,1.40855335290712,2.01024141344646,1.90517476513229,1.73826488917283,1.35036454324594,0.824171801606613,1.76638704161277,1.71434626192708,3.19456451086807,0.715308569841963,1.59881058295561,2.72917203204459,2.03075058940024,1.46342378298218,1.05227884575137,1.49384525230448,1.12228454331548,2.13543032623513,1.77308068276014,1.22769312950907,1.70430525304563,0.964533054905707,0.999242311751784,1.63752125911786,0.859484216193193,0.765153328275374,0.441182838239031,0.231867835620421|short_description=p10@Gpm6a}} | ||
|EntrezGene=234267 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=P35802,Q542P2 | |||
|association_with_transcript=298bp_to_ENSMUST00000033915,NM_001253756,NM_153581,uc009lsl.2_5end | |||
|description=CAGE_peak_10_at_Gpm6a_5end | |||
|id=chr8:56040379..56040390,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.66e-17!23;CL:0000337!1.66e-17!23;CL:0000540!1.10e-10!33;CL:0000047!1.10e-10!33;CL:0000031!1.10e-10!33;CL:0000404!1.10e-10!33;CL:0000393!6.76e-08!39;CL:0000211!6.76e-08!39;CL:0002319!1.13e-07!43;CL:0000221!2.48e-07!44;CL:0000133!2.48e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.01e-20,23;CL:0000337,3.01e-20,23;CL:0000540,4.02e-12,33;CL:0000047,4.02e-12,33;CL:0000031,4.02e-12,33;CL:0000404,4.02e-12,33;CL:0000393,2.59e-09,39;CL:0000211,2.59e-09,39;CL:0002319,6.67e-08,43;CL:0000221,1.36e-07,44;CL:0000133,1.36e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.11e-32!52;UBERON:0005068!1.11e-32!52;UBERON:0006241!1.11e-32!52;UBERON:0007135!1.11e-32!52;UBERON:0000955!7.56e-31!50;UBERON:0006238!7.56e-31!50;UBERON:0002616!8.27e-30!49;UBERON:0002020!1.97e-29!34;UBERON:0000033!1.07e-28!63;UBERON:0001017!1.74e-27!73;UBERON:0005743!1.74e-27!73;UBERON:0002346!2.34e-27!71;UBERON:0003075!2.34e-27!71;UBERON:0007284!2.34e-27!71;UBERON:0000073!3.47e-27!75;UBERON:0001016!3.47e-27!75;UBERON:0003056!2.01e-26!49;UBERON:0003080!1.29e-25!40;UBERON:0002791!8.54e-25!29;UBERON:0003528!8.54e-25!29;UBERON:0001893!8.54e-25!29;UBERON:0002780!1.14e-24!39;UBERON:0001890!1.14e-24!39;UBERON:0006240!1.14e-24!39;UBERON:0004121!2.53e-20!102;UBERON:0000924!2.53e-20!102;UBERON:0006601!2.53e-20!102;UBERON:0000956!1.06e-17!21;UBERON:0001869!1.06e-17!21;UBERON:0000203!1.06e-17!21;UBERON:0007811!5.07e-17!86;UBERON:0002619!2.05e-14!17;UBERON:0000153!3.93e-14!94;UBERON:0002021!4.42e-12!10;UBERON:0000411!4.42e-12!10;UBERON:0001950!4.42e-12!10;UBERON:0002420!3.57e-08!8;UBERON:0007245!3.57e-08!8;UBERON:0010009!3.57e-08!8;UBERON:0010011!3.57e-08!8;UBERON:0000454!3.57e-08!8;UBERON:0003076!2.17e-07!12;UBERON:0003057!2.17e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.74e-34,54;UBERON:0002020,1.18e-33,34;UBERON:0001049,3.55e-32,52;UBERON:0005068,3.55e-32,52;UBERON:0006241,3.55e-32,52;UBERON:0007135,3.55e-32,52;UBERON:0001017,6.22e-28,73;UBERON:0003528,7.82e-28,29;UBERON:0002791,7.82e-28,29;UBERON:0001893,7.82e-28,29;UBERON:0000955,8.22e-27,47;UBERON:0006238,8.22e-27,47;UBERON:0001016,8.39e-27,75;UBERON:0002616,1.27e-25,46;UBERON:0002346,5.88e-25,64;UBERON:0003075,5.88e-25,64;UBERON:0007284,5.88e-25,64;UBERON:0003080,3.35e-23,40;UBERON:0002780,4.23e-22,39;UBERON:0001890,4.23e-22,39;UBERON:0006240,4.23e-22,39;UBERON:0010371,2.74e-20,73;UBERON:0004121,4.24e-19,95;UBERON:0000924,4.24e-19,95;UBERON:0006601,4.24e-19,95;UBERON:0000956,5.94e-19,21;UBERON:0001869,5.94e-19,21;UBERON:0000203,5.94e-19,21;UBERON:0003056,2.59e-18,49;UBERON:0002021,6.64e-15,10;UBERON:0000411,6.64e-15,10;UBERON:0001950,6.64e-15,10;UBERON:0002619,7.61e-15,17;UBERON:0010314,1.59e-13,92;UBERON:0002420,5.95e-10,8;UBERON:0007245,5.95e-10,8;UBERON:0010009,5.95e-10,8;UBERON:0010011,5.95e-10,8;UBERON:0000454,5.95e-10,8;UBERON:0003076,3.01e-09,12;UBERON:0003057,3.01e-09,12;UBERON:0000025,4.19e-08,114;UBERON:0002240,1.00e-07,6;UBERON:0005174,1.00e-07,6;UBERON:0001137,1.00e-07,6;UBERON:0004111,7.05e-07,122;UBERON:0001948,7.27e-07,5;UBERON:0002315,7.27e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,4.45096213891115,5.81890077199236,0,0,0,0,0,0,0,0,5.39185984004084,4.59020190327748,5.04779907243317,4.85606673486466,6.18431914664518,6.1245399607477,4.02550978276593,0.919218786610021,3.30347642998166,11.2364857514965,9.5236050618871,4.74790635828698,7.22752384459036,7.8137005583514,6.42120897703176,11.8180148106653,16.0438160165651,15.6153150301044,19.5049202694771,7.82877672466262,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.296793474485,15.0801628905688,0,0,0,0,11.6836698735762,14.640019290196,7.79056983099759,36.3292829201858,40.6587577155226,11.6361304953354,20.6046404096052,0,0,0,0.631325567659422,0,0,0.180062129805349,0.30140963567143,0.544291993210623,0.384341160854549,0.749613796477831,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.4361018216962,9.15851050175631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72936002979246,3.98519734413491,0,0,0,0,0.430846795465598,0,0,0,0,0,0,16.0660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.177340233642274,0,0.493647061806363,0,0,0,0,0,0,0,0,0,0,4.45020724825223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0,0,0,0,0,0,0,0,0,0.576060012515731,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.0399361043237,61.2232564554545,48.1232231289093,61.0078797320091,52.0662715025688,51.3667850224996,49.2766425169218,39.1779446805072,41.6891016265468,27.4412965228465,0,0.798049746802062,0.682934423016537,1.70174701947806,0.209613162627982,1.2869045591501,1.55572709461131,2.67845574410562,2.88827288632634,2.77966932940177,2.28131369901216,2.45214243801899,2.99652823903624,1.40855335290712,2.01024141344646,1.90517476513229,1.73826488917283,1.35036454324594,0.824171801606613,1.76638704161277,1.71434626192708,3.19456451086807,0.715308569841963,1.59881058295561,2.72917203204459,2.03075058940024,1.46342378298218,1.05227884575137,1.49384525230448,1.12228454331548,2.13543032623513,1.77308068276014,1.22769312950907,1.70430525304563,0.964533054905707,0.999242311751784,1.63752125911786,0.859484216193193,0.765153328275374,0.441182838239031,0.231867835620421 | |||
|short_description=p10@Gpm6a | |||
}} |
Revision as of 15:47, 14 September 2013
Short description: | p10@Gpm6a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Gpm6a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 298bp_to_ENSMUST00000033915, NM_001253756, NM_153581, uc009lsl.2_5end |
EntrezGene: | Gpm6a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.01e-20 | 23 |
neuroblast (sensu Vertebrata) | 3.01e-20 | 23 |
neuron | 4.02e-12 | 33 |
neuronal stem cell | 4.02e-12 | 33 |
neuroblast | 4.02e-12 | 33 |
electrically signaling cell | 4.02e-12 | 33 |
electrically responsive cell | 2.59e-09 | 39 |
electrically active cell | 2.59e-09 | 39 |
neural cell | 6.67e-08 | 43 |
ectodermal cell | 1.36e-07 | 44 |
neurectodermal cell | 1.36e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.