FFCP PHASE1:Mm9::chr9:105397292..105397327,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=235574|HGNC=|UniProt=Q8BMS7|association_with_transcript=79bp_to_ENSMUST00000163879_5end|description=CAGE_peak_2_at_Atp2c1_5end|id=chr9:105397292..105397327,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.04e-12!51;UBERON:0000160!1.50e-08!43;UBERON:0005153!4.96e-08!17;UBERON:0005409!6.39e-08!59;UBERON:0000481!2.64e-07!230|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.32e-13,51;UBERON:0005153,4.68e-08,17;UBERON:0001008,5.92e-07,19;UBERON:0006554,9.63e-07,18|phase1_expression=1.76163731815273,2.79180326111489,3.18499467572675,3.62957053568196,3.50627010962443,1.84667199103079,2.80335168714631,0.258246646883153,1.68946466582,0.70219357896598,2.22583358693156,0.8774937489487,0.684802919724823,0.524522414513984,0.333109761815663,0.404950534779652,0,1.57731082679119,1.7824876368746,2.54633791078818,1.9559956734746,0.297872853602656,1.30599894569468,2.71987118748791,1.83527424853736,2.29692785646008,4.30761996159075,2.80112602491656,5.13063232532209,2.52030129759931,2.88249663851896,0.635030673459631,0,0,2.59966457776147,2.65975432573588,3.47087905646027,2.92972141515835,4.6880120671428,1.0470474879476,3.52938892818609,4.78131839470912,4.36959317728038,0.881277725829041,0.811015449756117,0.734187008646726,0,1.30815093828268,0,1.1665793944457,0.839918529752175,0,1.8456086666351,2.90144856804538,2.01656279485478,2.05807548828758,2.86533439938757,2.57836046138721,1.21389876515759,1.05798195854407,1.90149421051854,0.677689064138264,0.889294796111139,0.449949858640699,0.988866362566974,0,0,1.15265491596466,0.829516898467821,0.540023753326763,0.630974884054146,1.42825492201902,0.883474163806454,0.857435594504678,1.15014565221884,0.919218786610021,3.30347642998166,3.06449611404451,3.84016333140609,0.659431438650969,1.55528994124096,1.56274011167028,1.67509799400829,3.37657566019008,3.97275444219706,2.94628585473668,2.27794689278565,0.745597783301202,3.02904773332736,1.20914496170857,6.66688324013859,2.58127163094416,0,1.07940638327563,1.29955283489534,4.48026887097336,1.26399978118577,1.70430322578058,1.29893002301434,1.7666978725517,3.23939865486365,2.56652954828636,5.09610479413291,7.11066703153331,2.38140145112336,2.28023878927589,1.01104889002957,1.82694207550496,1.29468941823586,3.56261133755579,1.73485326766136,3.95805121805784,2.07553947530453,1.65794904607885,2.3517741427141,3.39299796590124,4.94389935468748,3.7595832799177,1.76922110389975,2.26473589926373,1.98757366614354,3.39412677194655,3.72783522436244,7.90508151931177,7.33063473847093,4.34276993854605,0.359445373517761,0,0.381210681219194,5.99162557619291,7.77751024791665,2.01046963380583,6.25767552692195,5.8814555185976,6.44142938134636,6.48965052271031,2.34230536855727,3.11017426525233,3.28539585963777,6.73413938836717,2.08192708740326,1.60931473103431,1.80062129805349,1.20563854268572,2.85753296435577,1.66547836370305,2.43624483855295,2.84573707812917,0.862271971731369,1.70195472151037,0.879755620819744,0.657587197282725,1.66828349535359,3.83077383174383,1.4404749548556,3.58261680273288,0.702213187313235,0.257347907114715,0.284163499395593,2.48550927042602,3.04883877975425,1.44049649168812,1.18372367792605,1.96764231747404,2.31400669331067,2.09280550275367,1.87791380979733,1.28441876603886,1.31647879930784,1.47750717671186,1.86458261955468,1.60819986167866,2.19550115291051,3.22095405024892,5.67782861123144,1.23485534855141,7.59963200862735,1.85115396664481,1.91959425481711,2.09013004674395,3.35055399437443,4.03367049246685,4.89231696458715,3.61428689613862,4.2707615539006,4.28217282282428,4.02136334080431,4.57599885694647,5.45899443933536,2.69645822596266,4.75503709724327,6.37252074413975,2.65535061334314,3.42745537829186,4.50830942692322,4.88763186828754,5.23671715352589,5.04977903210294,5.75452487830741,6.7900668070617,7.06494275286187,10.2419646055094,4.15033677922008,1.33476084572875,1.57247196090562,0.224862112384854,0.811440485554012,0.482354319504834,2.80088436959562,1.15078454980324,1.45921704097532,1.09824565275233,2.87536413054709,2.23284568601102,0.936113019343682,1.76805214562978,0.717589654087649,2.41221760681684,10.7156850296631,1.89491411770485,3.7481944581666,3.05541154395339,6.33663670378956,4.85768146581266,6.42717830392237,9.17128144931655,6.62067605246002,5.09368786192182,6.53764551495697,8.02930242107116,10.0157289482219,9.40218880779825,3.01582567878545,2.17562273527484,4.42587845717133,11.0374698521893,7.86697890940181,9.84578167374507,1.14754461763673,1.51482556322624,1.89304931649754,1.56175497718655,1.72338718186239,2.86762557543062,2.45078541490634,6.22768367735431,1.61924280669958,2.63030272120181,0.790575555893047,5.14114106274891,3.69044221541498,1.24645922567079,2.60619134965722,4.78413356620353,19.9117707509944,0.728341908464944,1.81394134178851,5.28094223316515,5.61073596473468,7.37844355065426,5.68542244970086,5.81653967164009,7.12994756769443,11.0612865277536,15.81279128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| ||
|EntrezGene=235574 | |||
|HGNC= | |||
|UniProt=Q8BMS7 | |||
|association_with_transcript=79bp_to_ENSMUST00000163879_5end | |||
|description=CAGE_peak_2_at_Atp2c1_5end | |||
|id=chr9:105397292..105397327,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.04e-12!51;UBERON:0000160!1.50e-08!43;UBERON:0005153!4.96e-08!17;UBERON:0005409!6.39e-08!59;UBERON:0000481!2.64e-07!230 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.32e-13,51;UBERON:0005153,4.68e-08,17;UBERON:0001008,5.92e-07,19;UBERON:0006554,9.63e-07,18 | |||
|phase1_expression=1.76163731815273,2.79180326111489,3.18499467572675,3.62957053568196,3.50627010962443,1.84667199103079,2.80335168714631,0.258246646883153,1.68946466582,0.70219357896598,2.22583358693156,0.8774937489487,0.684802919724823,0.524522414513984,0.333109761815663,0.404950534779652,0,1.57731082679119,1.7824876368746,2.54633791078818,1.9559956734746,0.297872853602656,1.30599894569468,2.71987118748791,1.83527424853736,2.29692785646008,4.30761996159075,2.80112602491656,5.13063232532209,2.52030129759931,2.88249663851896,0.635030673459631,0,0,2.59966457776147,2.65975432573588,3.47087905646027,2.92972141515835,4.6880120671428,1.0470474879476,3.52938892818609,4.78131839470912,4.36959317728038,0.881277725829041,0.811015449756117,0.734187008646726,0,1.30815093828268,0,1.1665793944457,0.839918529752175,0,1.8456086666351,2.90144856804538,2.01656279485478,2.05807548828758,2.86533439938757,2.57836046138721,1.21389876515759,1.05798195854407,1.90149421051854,0.677689064138264,0.889294796111139,0.449949858640699,0.988866362566974,0,0,1.15265491596466,0.829516898467821,0.540023753326763,0.630974884054146,1.42825492201902,0.883474163806454,0.857435594504678,1.15014565221884,0.919218786610021,3.30347642998166,3.06449611404451,3.84016333140609,0.659431438650969,1.55528994124096,1.56274011167028,1.67509799400829,3.37657566019008,3.97275444219706,2.94628585473668,2.27794689278565,0.745597783301202,3.02904773332736,1.20914496170857,6.66688324013859,2.58127163094416,0,1.07940638327563,1.29955283489534,4.48026887097336,1.26399978118577,1.70430322578058,1.29893002301434,1.7666978725517,3.23939865486365,2.56652954828636,5.09610479413291,7.11066703153331,2.38140145112336,2.28023878927589,1.01104889002957,1.82694207550496,1.29468941823586,3.56261133755579,1.73485326766136,3.95805121805784,2.07553947530453,1.65794904607885,2.3517741427141,3.39299796590124,4.94389935468748,3.7595832799177,1.76922110389975,2.26473589926373,1.98757366614354,3.39412677194655,3.72783522436244,7.90508151931177,7.33063473847093,4.34276993854605,0.359445373517761,0,0.381210681219194,5.99162557619291,7.77751024791665,2.01046963380583,6.25767552692195,5.8814555185976,6.44142938134636,6.48965052271031,2.34230536855727,3.11017426525233,3.28539585963777,6.73413938836717,2.08192708740326,1.60931473103431,1.80062129805349,1.20563854268572,2.85753296435577,1.66547836370305,2.43624483855295,2.84573707812917,0.862271971731369,1.70195472151037,0.879755620819744,0.657587197282725,1.66828349535359,3.83077383174383,1.4404749548556,3.58261680273288,0.702213187313235,0.257347907114715,0.284163499395593,2.48550927042602,3.04883877975425,1.44049649168812,1.18372367792605,1.96764231747404,2.31400669331067,2.09280550275367,1.87791380979733,1.28441876603886,1.31647879930784,1.47750717671186,1.86458261955468,1.60819986167866,2.19550115291051,3.22095405024892,5.67782861123144,1.23485534855141,7.59963200862735,1.85115396664481,1.91959425481711,2.09013004674395,3.35055399437443,4.03367049246685,4.89231696458715,3.61428689613862,4.2707615539006,4.28217282282428,4.02136334080431,4.57599885694647,5.45899443933536,2.69645822596266,4.75503709724327,6.37252074413975,2.65535061334314,3.42745537829186,4.50830942692322,4.88763186828754,5.23671715352589,5.04977903210294,5.75452487830741,6.7900668070617,7.06494275286187,10.2419646055094,4.15033677922008,1.33476084572875,1.57247196090562,0.224862112384854,0.811440485554012,0.482354319504834,2.80088436959562,1.15078454980324,1.45921704097532,1.09824565275233,2.87536413054709,2.23284568601102,0.936113019343682,1.76805214562978,0.717589654087649,2.41221760681684,10.7156850296631,1.89491411770485,3.7481944581666,3.05541154395339,6.33663670378956,4.85768146581266,6.42717830392237,9.17128144931655,6.62067605246002,5.09368786192182,6.53764551495697,8.02930242107116,10.0157289482219,9.40218880779825,3.01582567878545,2.17562273527484,4.42587845717133,11.0374698521893,7.86697890940181,9.84578167374507,1.14754461763673,1.51482556322624,1.89304931649754,1.56175497718655,1.72338718186239,2.86762557543062,2.45078541490634,6.22768367735431,1.61924280669958,2.63030272120181,0.790575555893047,5.14114106274891,3.69044221541498,1.24645922567079,2.60619134965722,4.78413356620353,19.9117707509944,0.728341908464944,1.81394134178851,5.28094223316515,5.61073596473468,7.37844355065426,5.68542244970086,5.81653967164009,7.12994756769443,11.0612865277536,15.8127912862498,16.5016869197099,5.7874732978144,1.98067203434441,2.06973894052407,2.57204442037911,3.01478397191865,2.31879462882692,2.13913726782757,0.913394847343798,4.69343416127421,6.35496212591461,30.8739757276947,3.62749756471256,3.39075296061402,2.23157822234177,2.86493625607528,3.93938159388147,8.45294426226567,7.6024373824309,1.87957968877638,1.23832120777933,0.925972636848558,1.13021074202815,1.6403307326523,2.0590035588587,0.679913719975421,0.559805809294632,1.10559979043539,4.77335309007557,1.89801596148681,1.82987520414164,3.34816556547584,2.92723614420256,2.83871332870031,5.25970950900801,4.959207343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| |||
|short_description=p2@Atp2c1 | |||
}} | |||
Revision as of 16:41, 14 September 2013
| Short description: | p2@Atp2c1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Atp2c1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 79bp_to_ENSMUST00000163879_5end |
| EntrezGene: | Atp2c1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 7.32e-13 | 51 |
| epithelial bud | 4.68e-08 | 17 |
| renal system | 5.92e-07 | 19 |
| urinary system structure | 9.63e-07 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
