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FFCP PHASE1:Mm9::chr9:34924389..34924476,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20443|HGNC=|UniProt=Q91Y74|association_with_transcript=0bp_to_ENSMUST00000034537,NM_009178,uc009osm.1_5end|description=CAGE_peak_1_at_St3gal4_5end|id=chr9:34924389..34924476,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000466!3.46e-13!79;UBERON:0002107!1.25e-09!22;UBERON:0007499!1.25e-09!22;UBERON:0006925!1.25e-09!22;UBERON:0009497!1.25e-09!22;UBERON:0000015!1.25e-09!22;UBERON:0002423!1.25e-09!22;UBERON:0006235!1.25e-09!22;UBERON:0008835!1.25e-09!22;UBERON:0003894!1.25e-09!22;UBERON:0004161!1.25e-09!22;UBERON:0008836!1.25e-09!22;UBERON:0009854!4.52e-09!23;UBERON:0009856!4.52e-09!23;UBERON:0002365!5.66e-08!25;UBERON:0002330!5.66e-08!25;UBERON:0001048!2.16e-07!147;UBERON:0003914!6.90e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.25e-09,22;UBERON:0007499,1.25e-09,22;UBERON:0006925,1.25e-09,22;UBERON:0009497,1.25e-09,22;UBERON:0000015,1.25e-09,22;UBERON:0002423,1.25e-09,22;UBERON:0006235,1.25e-09,22;UBERON:0008835,1.25e-09,22;UBERON:0003894,1.25e-09,22;UBERON:0004161,1.25e-09,22;UBERON:0008836,1.25e-09,22;UBERON:0009854,4.51e-09,23;UBERON:0009856,4.51e-09,23;UBERON:0002365,5.66e-08,25;UBERON:0002330,5.66e-08,25;UBERON:0001048,5.31e-07,134;UBERON:0003914,6.90e-07,47|phase1_expression=19.2178616525753,0.697950815278722,1.36499771816861,0,0,0.503637815735669,0.467225281191051,21.0471017209769,10.2775767170717,12.1713553687437,11.8140398075598,18.507140886918,13.0112554747716,12.4136971434976,26.3156711834374,20.6524772737622,44.0723983220732,6.78243655520211,6.03303507865251,9.33657233955666,13.2667532635669,13.6028603145213,13.3211892460857,6.23970448894286,6.19405058881359,0,0.430761996159075,0.646413698057667,0.380046838912748,0.504060259519861,0,34.2916563668201,33.8285633171514,15.8481681015439,1.73310971850765,3.98963148860382,5.9209113316087,36.8307835048479,39.06676722619,21.9879972468995,44.7055930903571,38.9335926426314,35.9277661243054,18.758625878361,18.7547322756102,16.5192076945513,50.8554373826225,20.9304150125229,19.552070263368,15.9432517240912,28.2772571683232,18.6878333674463,1.67782606057736,7.97898356212479,13.1076581665561,13.8920095459411,12.8940047972441,11.8604581223812,9.91350658212029,9.52183762689659,12.6766280701236,25.0744953731158,40.0182658250013,22.0475430733943,19.7773272513395,31.2611250576284,18.5752068521411,17.28982373947,7.05089363697648,8.23536223823313,6.52007380189284,13.9968982357864,14.7981922437581,6.24703075996266,7.85932862349538,6.43453150627015,20.9220173898839,20.0469120793745,17.5111447912118,12.1335384711778,10.4295913706747,13.022834263919,15.6342479440773,16.8828783009504,19.4053774676549,8.83885756421003,8.68467252874528,9.31997229126503,9.23859558664845,15.2654551415707,125.801188096528,62.8109430196412,55.7576493640355,37.2395202230094,50.0327841434705,34.4980703064948,19.1004411379183,9.20323741921512,7.27400812888033,6.36011234118612,14.3660288172214,21.815501160434,10.1922095882658,7.11066703153331,11.4740251735943,12.4146334082798,11.1215377903252,19.1828917928021,13.2058320660058,16.92240385339,15.6136794089522,10.0473607843007,9.4552353874984,11.7563659631046,15.521709341913,20.6093209780668,55.1244778047654,13.8815382643115,17.6922110389975,19.0884882937943,18.3298460322127,17.9403843660032,13.0474232852686,12.5895742714965,16.3368431314495,34.4867024531598,17.8524535513821,16.197373736822,16.2649890653523,16.7765516133401,16.9275223042892,10.3036568732549,13.7321212951898,12.5300574091862,18.90871205492,20.1179166204019,18.4329248569072,17.9146037678534,4.0435641349388,6.94458124425364,11.5807194236806,13.3343220571414,8.28285797104606,12.5084998803643,11.4301318574231,9.48041530107888,13.118241438362,12.9351685369508,14.0119195406347,16.2631228944325,18.1229657888867,18.8508329887714,21.6876854395966,22.6363908239408,22.6360350048738,20.1024609486678,17.5553296828309,23.1613116403244,21.596425954065,11.3919174894526,10.0846205791871,10.4435995647389,11.3637473080901,14.3637889175605,16.5065810789495,19.3003174142839,21.1935987105699,18.2153934092784,27.8106146353782,21.3417703302824,24.725986911486,25.7311977868585,21.0768110679409,27.5123158458762,9.2527577368216,10.5991750750663,43.2848605708775,1.85115396664481,13.650448034255,12.3085436086032,19.2012517369919,22.1851877085677,23.3496946037114,23.7782032640699,33.6915633696603,27.8341233483578,36.9462756936396,30.0424272782138,34.3136793329651,35.0539569375146,16.4264917904768,16.3295844068581,11.3800740571849,10.967857210534,4.50830942692322,6.51684249105006,8.14600446104028,7.925347647606,12.0149420536089,7.0852871030209,8.47793130343424,8.39100714668244,77.3741356697459,17.5187361001899,18.8696635308675,21.8116249013308,18.0545508035768,23.153007336232,20.1154422907322,25.0295639582205,17.5106044917038,23.8868429473631,33.0666875012915,42.4240680342094,38.380633793091,59.8611940734655,41.9789947641274,41.9725863586129,19.9533445379933,11.7484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|EntrezGene=20443
|HGNC=
|UniProt=Q91Y74
|association_with_transcript=0bp_to_ENSMUST00000034537,NM_009178,uc009osm.1_5end
|description=CAGE_peak_1_at_St3gal4_5end
|id=chr9:34924389..34924476,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.25e-09,22;UBERON:0007499,1.25e-09,22;UBERON:0006925,1.25e-09,22;UBERON:0009497,1.25e-09,22;UBERON:0000015,1.25e-09,22;UBERON:0002423,1.25e-09,22;UBERON:0006235,1.25e-09,22;UBERON:0008835,1.25e-09,22;UBERON:0003894,1.25e-09,22;UBERON:0004161,1.25e-09,22;UBERON:0008836,1.25e-09,22;UBERON:0009854,4.51e-09,23;UBERON:0009856,4.51e-09,23;UBERON:0002365,5.66e-08,25;UBERON:0002330,5.66e-08,25;UBERON:0001048,5.31e-07,134;UBERON:0003914,6.90e-07,47
|phase1_expression=19.2178616525753,0.697950815278722,1.36499771816861,0,0,0.503637815735669,0.467225281191051,21.0471017209769,10.2775767170717,12.1713553687437,11.8140398075598,18.507140886918,13.0112554747716,12.4136971434976,26.3156711834374,20.6524772737622,44.0723983220732,6.78243655520211,6.03303507865251,9.33657233955666,13.2667532635669,13.6028603145213,13.3211892460857,6.23970448894286,6.19405058881359,0,0.430761996159075,0.646413698057667,0.380046838912748,0.504060259519861,0,34.2916563668201,33.8285633171514,15.8481681015439,1.73310971850765,3.98963148860382,5.9209113316087,36.8307835048479,39.06676722619,21.9879972468995,44.7055930903571,38.9335926426314,35.9277661243054,18.758625878361,18.7547322756102,16.5192076945513,50.8554373826225,20.9304150125229,19.552070263368,15.9432517240912,28.2772571683232,18.6878333674463,1.67782606057736,7.97898356212479,13.1076581665561,13.8920095459411,12.8940047972441,11.8604581223812,9.91350658212029,9.52183762689659,12.6766280701236,25.0744953731158,40.0182658250013,22.0475430733943,19.7773272513395,31.2611250576284,18.5752068521411,17.28982373947,7.05089363697648,8.23536223823313,6.52007380189284,13.9968982357864,14.7981922437581,6.24703075996266,7.85932862349538,6.43453150627015,20.9220173898839,20.0469120793745,17.5111447912118,12.1335384711778,10.4295913706747,13.022834263919,15.6342479440773,16.8828783009504,19.4053774676549,8.83885756421003,8.68467252874528,9.31997229126503,9.23859558664845,15.2654551415707,125.801188096528,62.8109430196412,55.7576493640355,37.2395202230094,50.0327841434705,34.4980703064948,19.1004411379183,9.20323741921512,7.27400812888033,6.36011234118612,14.3660288172214,21.815501160434,10.1922095882658,7.11066703153331,11.4740251735943,12.4146334082798,11.1215377903252,19.1828917928021,13.2058320660058,16.92240385339,15.6136794089522,10.0473607843007,9.4552353874984,11.7563659631046,15.521709341913,20.6093209780668,55.1244778047654,13.8815382643115,17.6922110389975,19.0884882937943,18.3298460322127,17.9403843660032,13.0474232852686,12.5895742714965,16.3368431314495,34.4867024531598,17.8524535513821,16.197373736822,16.2649890653523,16.7765516133401,16.9275223042892,10.3036568732549,13.7321212951898,12.5300574091862,18.90871205492,20.1179166204019,18.4329248569072,17.9146037678534,4.0435641349388,6.94458124425364,11.5807194236806,13.3343220571414,8.28285797104606,12.5084998803643,11.4301318574231,9.48041530107888,13.118241438362,12.9351685369508,14.0119195406347,16.2631228944325,18.1229657888867,18.8508329887714,21.6876854395966,22.6363908239408,22.6360350048738,20.1024609486678,17.5553296828309,23.1613116403244,21.596425954065,11.3919174894526,10.0846205791871,10.4435995647389,11.3637473080901,14.3637889175605,16.5065810789495,19.3003174142839,21.1935987105699,18.2153934092784,27.8106146353782,21.3417703302824,24.725986911486,25.7311977868585,21.0768110679409,27.5123158458762,9.2527577368216,10.5991750750663,43.2848605708775,1.85115396664481,13.650448034255,12.3085436086032,19.2012517369919,22.1851877085677,23.3496946037114,23.7782032640699,33.6915633696603,27.8341233483578,36.9462756936396,30.0424272782138,34.3136793329651,35.0539569375146,16.4264917904768,16.3295844068581,11.3800740571849,10.967857210534,4.50830942692322,6.51684249105006,8.14600446104028,7.925347647606,12.0149420536089,7.0852871030209,8.47793130343424,8.39100714668244,77.3741356697459,17.5187361001899,18.8696635308675,21.8116249013308,18.0545508035768,23.153007336232,20.1154422907322,25.0295639582205,17.5106044917038,23.8868429473631,33.0666875012915,42.4240680342094,38.380633793091,59.8611940734655,41.9789947641274,41.9725863586129,19.9533445379933,11.7484675297701,12.385338209594,14.2585872051158,18.7752198630802,22.2783322397615,20.9478403979692,24.3917059822249,32.9457451181939,27.9045508957456,36.5151420225645,23.5963173190663,26.9388571710797,21.8420078458082,6.03165135757089,15.2293591469239,9.34352118736169,19.0396354950265,14.4495530989013,18.7538698547525,13.2787305755107,8.33154059774431,27.4492150892143,18.350620981942,29.0821586939279,18.6395662402991,17.8238939265915,16.7015153165411,20.2405350837447,17.2430956167674,13.8350722281283,10.6036034419196,50.8145505045602,31.1614806417697,23.9443830249757,19.7964147567043,2.65490276679926,19.6652315285535,22.3719432153916,15.6542216197395,18.6040192514887,21.8278955040189,28.4271122485043,33.081569382453,23.1723295950069,15.8018378967908,8.4334886859999,9.28219889233682,6.80879211507576,8.64293251350289,7.63216234318252,10.7168517515796,10.6404140185364,13.7343989553594,11.3538824215463,12.7875278628132,32.1500240047283,24.5725202202031,2.20528398054962,11.3771514529621,10.6566521619298,13.932285658404,13.3697025283513,10.0125948844487,18.3632927076806,17.4299783889879,23.0675689077101,19.1939787205797,31.1126805981116,23.9227940395958,26.5186801778789,21.0475919350001,16.9978429993855,19.0333975160175,19.4861963064238,4.77335309007557,12.1789357528737,14.84232110026,14.7967316925868,7.94535524854981,12.0099410060398,12.2726555210187,14.7949685748351,4.97336289769656,2.85152941241944,9.94142900939081,11.2738587736838,33.6412228598952,27.3006509254211,42.3903590590024,49.0807329215378,53.2211795295951,54.8058304475671,73.9560905913637,64.5933561662379,25.6079168075566,18.7219504067613,12.324433704499,11.5553372715394,12.2226039026144,10.0039033692902,13.6060288707286,8.94066096515692,12.7407176491167,10.3382669022204,9.49084629512588,9.52585083187498,10.4859232542314,10.9152826428523,9.90981968895393,12.0383209247016,7.25537227568676,7.76950836809226,16.0587803330961,7.72269235274761,9.65947970160952,25.1494517104584,12.8206136987086,22.0799430451438,1.50471631210609,10.1655331671072,10.1271552031579,12.6037012956667,10.998603669996,8.90607275701835,9.82012066606611,8.10027000278167,6.30449684513909,7.70342095273148,10.8729665467882,8.61434984948666,12.768795948833,17.4148277869217,19.9347507996001,13.2056292455629,13.052889099951,16.4462578573195,19.5733304376949,12.5158491740808,18.699593670521,16.4761544928656,14.7128546281139,14.9826411951812,18.3111935877926,16.8285924039947,17.1465728861907,21.670368951688,16.5901929598786,14.835092428919,14.8670909335741,13.7147700954166,14.0205886865877,19.7902037656276,15.8427594129238,16.7514697139288,17.9382968730354,17.5610853957862,18.1518100892112,15.0742566368907,16.8342681497322,21.5915732985997,19.0113650984837,11.867700251921,19.5220419894317,19.8693809310576,20.4844673909116,16.1412809827332,18.9086527562503,18.9375448748155,16.3237650148441,15.0714093153274
|short_description=p1@St3gal4
}}

Revision as of 17:40, 14 September 2013

Short description:p1@St3gal4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_St3gal4_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000034537, NM_009178, uc009osm.1_5end
EntrezGene:St3gal4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@St3gal4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G719.22
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E921.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F212.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E611.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F118.51
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.01
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.41
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A126.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A320.65
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A544.07
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.78
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.03
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.34
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H213.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.32
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.19
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I334.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G633.83
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.92
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G836.83
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H139.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H321.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G944.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H238.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H435.93
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D818.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D918.75
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B316.52
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B750.86
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.93
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B819.55
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C428.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.11
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.89
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.86
Mouse Granule cells, donor1.CNhs12131.11713-123C39.91
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C625.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D140.02
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C722.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E719.78
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D231.26
Mouse Microglia, donor1.CNhs12629.11718-123C818.58
Mouse Microglia, donor2.CNhs12634.11736-123E817.29
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.05
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.80
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.05
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.51
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.43
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.02
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.41
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.32
Mouse Schwann, donor1.CNhs12507.11728-123D99.24
Mouse Schwann, donor2.CNhs12573.11746-123F915.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3125.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F762.81
Mouse hepatocyte, donor1.CNhs13078.11714-123C455.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C837.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F450.03
Mouse hepatocyte, donor8.CNhs13091.11824-124F634.50
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H121.82
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G111.47
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.12
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.18
accessory axillary lymph node, adult.CNhs10475.1063-29H913.21
adrenal gland, adult.CNhs10508.49-24D716.92
adrenal gland, embryo E14.CNhs11038.406-44C515.61
adrenal gland, embryo E16.CNhs11004.1254-43D610.05
adrenal gland, embryo E17.CNhs11043.1263-45I19.46
adrenal gland, embryo E18.CNhs11026.1262-18F511.76
adrenal gland, neonate N00.CNhs11191.1311-23C115.52
adrenal gland, neonate N25.CNhs11223.1377-27I320.61
amnion, adult pregnant day17.5.CNhs10488.583-22A855.12
aorta, adult.CNhs10498.46-23H113.88
bone (os femoris), adult.CNhs10483.56-12G217.69
bone (os femoris), neonate N02.CNhs11227.1985-43F519.09
bone (os femoris), neonate N16.CNhs11225.1525-43A618.33
bone (os femoris), neonate N20.CNhs11195.1350-25C317.94
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B212.59
cerebellum, neonate N30.CNhs11135.1395-42I216.34
colon, adult.CNhs10468.36-18H734.49
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C717.85
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D116.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D416.26
corpora quadrigemina, adult.CNhs10501.16-22A416.78
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F110.30
cortex, adult.CNhs10473.12-14D513.73
cortex, neonate N30.CNhs11107.1392-42F212.53
diencephalon, adult.CNhs10482.20-12F218.91
diencephalon, neonate N30.CNhs11201.1388-42B220.12
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A217.91
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G46.94
eyeball, embryo E12.CNhs11016.345-16C611.58
eyeball, embryo E14.CNhs10521.399-16E213.33
eyeball, embryo E15.CNhs10593.426-16C98.28
eyeball, embryo E17.CNhs11023.1261-18D412.51
eyeball, neonate N00.CNhs11207.633-15C611.43
eyeball, neonate N01.CNhs11140.1532-43E79.48
eyeball, neonate N02.CNhs11205.1551-44G813.12
eyeball, neonate N16.CNhs11188.777-19A212.94
forelimb, embryo E11.CNhs10596.335-25E214.01
forelimb, embryo E12.CNhs10600.359-14H216.26
forelimb, embryo E13.CNhs10589.384-1E218.12
forelimb, embryo E14.CNhs10577.413-26A818.85
forelimb, embryo E15.CNhs11007.437-20E721.69
forelimb, embryo E17.CNhs10598.1517-43C422.64
forelimb, embryo E18.CNhs11008.1520-43B522.64
gonad, embryo E13.CNhs11044.1564-45I620.10
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C817.56
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D223.16
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D521.60
heart, embryo E11.CNhs10586.331-24E911.39
heart, embryo E12.CNhs11015.353-12F510.08
heart, embryo E13.CNhs11013.376-3I910.44
heart, embryo E14.CNhs10597.403-26D411.36
heart, embryo E15.CNhs11017.431-16C814.36
heart, embryo E16.CNhs11021.457-17C616.51
heart, embryo E17.CNhs11025.479-18E519.30
heart, embryo E18.CNhs11030.1283-20G321.19
heart, neonate N00.CNhs11213.639-21E318.22
heart, neonate N03.CNhs11221.1349-25I227.81
heart, neonate N10.CNhs11118.749-24G121.34
heart, neonate N16.CNhs11209.782-15G124.73
heart, neonate N20.CNhs11127.821-26I625.73
heart, neonate N25.CNhs11196.1351-25D321.08
heart, neonate N30.CNhs11202.1390-42D227.51
hippocampus, adult.CNhs10478.13-16E89.25
hippocampus, neonate N00.CNhs11228.627-43G110.60
intestinal mucosa, adult.CNhs10506.860-29I343.28
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I513.65
intestine, embryo E13.CNhs11010.381-16D512.31
intestine, embryo E15.CNhs10602.976-16D819.20
intestine, embryo E16.CNhs10585.463-22H422.19
intestine, embryo E17.CNhs10582.482-18D323.35
intestine, embryo E18.CNhs10526.1289-20F723.78
intestine, neonate N00.CNhs11126.644-26D133.69
intestine, neonate N01.CNhs11192.1322-23E927.83
intestine, neonate N06.CNhs11102.688-20B836.95
intestine, neonate N07.CNhs11095.720-20F230.04
intestine, neonate N10.CNhs11098.755-23A534.31
intestine, neonate N20.CNhs11187.827-18D135.05
intestine, neonate N25.CNhs11121.1352-25E316.43
intestine, neonate N30.CNhs11131.1384-42G116.33
kidney, embryo E14.CNhs10606.411-4I911.38
kidney, embryo E15.CNhs10997.434-16F810.97
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I26.52
kidney, embryo E18.CNhs11001.1288-20C78.15
kidney, neonate N00.CNhs11214.646-21G77.93
kidney, neonate N10.CNhs11206.758-6D512.01
kidney, neonate N20.CNhs11113.832-19I17.09
kidney, neonate N25.CNhs11122.1353-25F38.48
kidney, neonate N30.CNhs11203.1385-42H18.39
liver, adult pregnant day01.CNhs10466.508-5B277.37
liver, embryo E12.CNhs10601.355-15F817.52
liver, embryo E13.CNhs10524.378-3H618.87
liver, embryo E14.CNhs10594.409-16E121.81
liver, embryo E15.CNhs10520.433-16D718.05
liver, embryo E16.CNhs10523.462-17F523.15
liver, embryo E17.CNhs10510.481-18A320.12
liver, embryo E18.CNhs10579.499-43G425.03
liver, neonate N00.CNhs11117.641-24F417.51
liver, neonate N03.CNhs11123.1345-25G223.89
liver, neonate N06.CNhs11101.684-20A833.07
liver, neonate N07.CNhs11103.716-20H242.42
liver, neonate N10.CNhs11115.751-24B938.38
liver, neonate N20.CNhs11220.823-25A359.86
liver, neonate N25.CNhs11198.1368-26H141.98
liver, neonate N30.CNhs11106.1382-42D141.97
lung, adult.CNhs10474.28-22B119.95
lung, embryo E12.CNhs10522.354-16G211.75
lung, embryo E14.CNhs10604.404-26F812.39
lung, embryo E15.CNhs11020.432-17C514.26
lung, embryo E16.CNhs10998.458-17B618.78
lung, embryo E17.CNhs10605.480-44A622.28
lung, embryo E18.CNhs10583.1287-20I620.95
lung, neonate N00.CNhs11224.640-42C624.39
lung, neonate N06.CNhs11212.683-20E532.95
lung, neonate N07.CNhs11111.715-19A327.90
lung, neonate N10.CNhs11219.750-23E636.52
lung, neonate N20.CNhs11109.822-18A423.60
lung, neonate N25.CNhs11119.1359-25C726.94
lung, neonate N30.CNhs11133.1394-42H221.84
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.23
mammary gland, adult lactating day02.CNhs10480.595-22B69.34
mammary gland, adult pregnant day19.CNhs10476.588-5H219.04
medulla oblongata, adult.CNhs10477.17-12C214.45
medulla oblongata, neonate N30.CNhs11200.1396-42A318.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.33
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E127.45
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.35
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E329.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.64
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.82
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D916.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D420.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D517.24
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.84
olfactory brain, adult.CNhs10489.18-22I910.60
ovary, adult.CNhs10507.91-2I750.81
ovary, embryo E18.CNhs11040.505-44H731.16
ovary, neonate N00.CNhs11217.1299-22I423.94
oviduct, adult pregnant day01.CNhs10500.988-6G619.80
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F419.67
pancreas, embryo E15.CNhs11042.1556-45F222.37
pancreas, embryo E16.CNhs11003.460-26E515.65
pancreas, embryo E17.CNhs10599.1558-45G318.60
pancreas, embryo E18.CNhs10580.1535-43I721.83
pancreas, neonate N00.CNhs11105.645-26G928.43
pancreas, neonate N01.CNhs11138.1531-43D733.08
pancreas, neonate N02.CNhs11139.1539-43D823.17
pancreas, neonate N16.CNhs11136.787-43B615.80
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E68.64
pituitary gland, embryo E13.CNhs11009.370-44C77.63
pituitary gland, embryo E14.CNhs11037.398-44A510.72
pituitary gland, embryo E15.CNhs10592.427-16B910.64
pituitary gland, embryo E16.CNhs11036.449-43F613.73
pituitary gland, embryo E17.CNhs11039.1265-44F511.35
pituitary gland, neonate N00.CNhs11190.1308-22E912.79
placenta, adult pregnant day10.CNhs10472.539-13I732.15
placenta, adult pregnant day17.CNhs10464.577-18G324.57
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C311.38
skin, neonate N00.CNhs11124.650-25G410.66
skin, neonate N03.CNhs11215.662-22H313.93
skin, neonate N06.CNhs11097.693-20I513.37
skin, neonate N10.CNhs11108.762-6C410.01
small intestine, neonate N16.CNhs11114.790-21I118.36
spinal cord, adult.CNhs10505.24-13C917.43
spleen, adult.CNhs10465.25-2G223.07
spleen, embryo E16.CNhs11035.461-43C119.19
spleen, embryo E18.CNhs11011.1271-21F231.11
spleen, neonate N10.CNhs11116.752-24D123.92
spleen, neonate N20.CNhs11112.824-19H126.52
spleen, neonate N25.CNhs11099.1354-25G321.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D319.49
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E312.18
stomach, embryo E15.CNhs10603.1252-16G814.84
stomach, embryo E16.CNhs11022.459-17D414.80
stomach, embryo E17.CNhs11006.1035-18D57.95
stomach, embryo E18.CNhs10999.1286-20C612.01
stomach, neonate N03.CNhs11193.1340-24B812.27
stomach, neonate N07.CNhs11210.718-18A914.79
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G511.27
testis, embryo E13.CNhs11031.389-23F533.64
testis, embryo E15.CNhs11034.443-27C527.30
testis, embryo E16.CNhs11033.470-26G542.39
testis, embryo E17.CNhs11029.486-18I549.08
testis, embryo E18.CNhs11027.503-18G553.22
testis, neonate N00.CNhs11189.1300-22B754.81
testis, neonate N07.CNhs11222.726-26I473.96
testis, neonate N10.CNhs11204.763-44D964.59
testis, neonate N20.CNhs11110.839-18H325.61
testis, neonate N30.CNhs11130.1391-42E218.72
thymus, adult.CNhs10471.38-12B512.32
thymus, embryo E14.CNhs11041.402-44I411.56
thymus, embryo E15.CNhs11005.430-45I212.22
thymus, embryo E16.CNhs11002.456-26C510.00
thymus, embryo E17.CNhs10581.478-18C113.61
thymus, embryo E18.CNhs10595.1273-19G48.94
thymus, neonate N02.CNhs11181.1541-43F812.74
thymus, neonate N03.CNhs11137.2104-43C710.34
thymus, neonate N06.CNhs11197.681-26C49.49
thymus, neonate N07.CNhs11211.713-19D39.53
thymus, neonate N10.CNhs11194.748-24E410.49
thymus, neonate N20.CNhs11186.820-7A210.92
thymus, neonate N25.CNhs11125.1362-25G79.91
thymus, neonate N30.CNhs11132.1393-42G212.04
tongue, adult.CNhs10499.32-1B47.26
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F716.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.72
urinary bladder, adult.CNhs10481.879-12E49.66
uterus, adult pregnant day19.CNhs10497.590-15F525.15
uterus, adult.CNhs10509.92-27E512.82
vagina, adult.CNhs10502.89-27D522.08
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.87
whole body, embryo E11.CNhs11014.324-5I88.61
whole body, embryo E12.CNhs10587.857-27C912.77
whole body, embryo E13.CNhs10512.372-23H217.41
whole body, embryo E14.5.CNhs10578.420-27D219.93
whole body, embryo E14.CNhs10519.395-14B113.21
whole body, embryo E16.CNhs10514.453-14F213.05
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G519.57
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.70
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.71
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.98
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.31
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G517.15
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G516.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.84
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.87
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.79
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.84
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.94
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G521.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.01
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.52
whole body, embryo E17.5.CNhs10513.490-9F919.87
whole body, embryo E17.CNhs10517.475-3I520.48
whole body, embryo E18.CNhs10516.493-3B316.14
whole body, neonate N00.CNhs10525.657-19C218.91
whole body, neonate N01.CNhs10576.659-23C618.94
whole body, neonate N06.CNhs10515.692-21D116.32
whole body, neonate N10.CNhs10518.761-6B415.07





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver1.25e-0922
epithelial sac1.25e-0922
digestive gland1.25e-0922
epithelium of foregut-midgut junction1.25e-0922
anatomical boundary1.25e-0922
hepatobiliary system1.25e-0922
foregut-midgut junction1.25e-0922
hepatic diverticulum1.25e-0922
liver primordium1.25e-0922
septum transversum1.25e-0922
liver bud1.25e-0922
digestive tract diverticulum4.51e-0923
sac4.51e-0923
exocrine gland5.66e-0825
exocrine system5.66e-0825
primordium5.31e-07134
epithelial tube6.90e-0747







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