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{{f5samples
{{f5samples
|DRA_sample_Accession=CAGE@DRS008435
|ancestors_in_anatomy_facet=
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000219,CL:0000738,CL:0000990,CL:0000255,CL:0000451,CL:0000453,CL:0000840,CL:0001014,CL:0001016
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000219,CL:0000738,CL:0000990,CL:0000255,CL:0000451,CL:0000453,CL:0000840,CL:0001014,CL:0001016
Line 41: Line 42:
|is_a=EFO:0002091;;FF:0011135
|is_a=EFO:0002091;;FF:0011135
|is_obsolete=
|is_obsolete=
|library_ids=CNhs13537
|name=immature langerhans cells, donor1
|name=immature langerhans cells, donor1
|namespace=
|namespace=
Line 85: Line 87:
|top_motifs=NFKB1_REL_RELA:2.6578241477;CREB1:2.54825868468;ATF5_CREB3:2.50487662999;HSF1,2:2.32388151032;FOXN1:2.29992511255;JUN:2.09523632546;ATF4:2.09466218661;NANOG{mouse}:2.01863221224;TLX2:1.98585492075;SPI1:1.62589858563;PAX2:1.56050380238;FOXP3:1.54094506879;FOSL2:1.48397540523;SPIB:1.48350992749;RUNX1..3:1.42662025206;DMAP1_NCOR{1,2}_SMARC:1.28984636052;TGIF1:1.28149331303;ATF2:1.26196255894;RFX2..5_RFXANK_RFXAP:1.17325116111;HIF1A:1.17160565276;GLI1..3:1.05569693326;FOS_FOS{B,L1}_JUN{B,D}:1.05114850891;HMX1:1.03568823659;NFE2L1:0.957370172476;BACH2:0.953163738115;VSX1,2:0.928800602254;TBX4,5:0.907907566217;ETS1,2:0.906882294936;POU5F1:0.881820314628;SREBF1,2:0.880819468848;NKX2-2,8:0.830751384138;FOX{F1,F2,J1}:0.786914184457;MAFB:0.754257232517;ATF6:0.721772835661;ELF1,2,4:0.693047578288;NFIL3:0.679423133682;STAT1,3:0.677248041132;TBP:0.66335070091;FOXQ1:0.601783191253;ESRRA:0.583431032283;ZEB1:0.557789534686;CDX1,2,4:0.542741970724;IRF1,2:0.526105547827;EP300:0.525080993656;AHR_ARNT_ARNT2:0.503909137782;NFATC1..3:0.500457674684;BPTF:0.496973451642;NFE2:0.479796635506;EGR1..3:0.420997619836;NKX6-1,2:0.419128439715;FOX{D1,D2}:0.412752530643;PAX6:0.410468000128;POU1F1:0.368130530132;MYB:0.367421847657;EN1,2:0.330742930556;HOXA9_MEIS1:0.292465023893;ZBTB16:0.284826477479;NFE2L2:0.28188244534;SNAI1..3:0.26620807142;NANOG:0.252809582937;POU2F1..3:0.241067549419;PAX3,7:0.234714057725;CUX2:0.193024024472;NKX3-1:0.176231802048;STAT5{A,B}:0.157839394287;IRF7:0.15541171206;FOXA2:0.0925103932118;CEBPA,B_DDIT3:0.0922297293742;SOX2:0.0863550623262;RORA:0.083388973047;POU3F1..4:0.0736517033435;MED-1{core}:0.0623145230109;ALX1:0.043908559981;E2F1..5:0.0411399443718;HBP1_HMGB_SSRP1_UBTF:0.0225513458728;PAX8:0.000990719537141;SOX17:-0.0349581655987;PPARG:-0.0711938354221;SMAD1..7,9:-0.0771757788933;TFDP1:-0.091122322026;STAT2,4,6:-0.0952160930266;AIRE:-0.102403626266;ZBTB6:-0.130116919932;HES1:-0.143850916482;SPZ1:-0.212588079711;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.214230617139;MYFfamily:-0.217914528193;TFAP2{A,C}:-0.238366694187;FOXP1:-0.25351030248;MYOD1:-0.268625670175;MEF2{A,B,C,D}:-0.273242536004;ALX4:-0.274275517669;ZFP161:-0.282367743042;NKX2-1,4:-0.289785915455;NKX3-2:-0.29338688297;HNF4A_NR2F1,2:-0.303007332871;OCT4_SOX2{dimer}:-0.320211067503;ELK1,4_GABP{A,B1}:-0.339850602097;HOX{A5,B5}:-0.340119907573;RFX1:-0.350401118323;NFY{A,B,C}:-0.354514297578;XBP1:-0.36973807903;SRF:-0.387427002247;TP53:-0.388767712538;PAX1,9:-0.398051062461;GCM1,2:-0.400043312334;CDC5L:-0.404183861838;PAX4:-0.406724137985;BREu{core}:-0.408354460699;IKZF2:-0.414236476569;SP1:-0.433335090376;NFIX:-0.439150915752;LMO2:-0.474562838532;HLF:-0.49602763214;CRX:-0.496040386498;HNF1A:-0.506588154445;MZF1:-0.518371126688;HMGA1,2:-0.520086374859;MAZ:-0.540361012513;GATA6:-0.545040155276;LHX3,4:-0.553616358641;HAND1,2:-0.556294293729;PAX5:-0.5664352791;ZIC1..3:-0.592773197822;TAL1_TCF{3,4,12}:-0.610838869047;NKX2-3_NKX2-5:-0.62829215833;PITX1..3:-0.645536679012;MYBL2:-0.668574336263;NR3C1:-0.680800763547;ESR1:-0.724096383956;GFI1:-0.727612577823;ZNF148:-0.745758638031;NHLH1,2:-0.756798564864;RXRA_VDR{dimer}:-0.777936977711;EVI1:-0.780324085172;PRRX1,2:-0.782259809346;TFCP2:-0.827193523834;MTE{core}:-0.834971558643;SOX5:-0.838787305812;YY1:-0.862232991649;FOXO1,3,4:-0.865770917329;NR5A1,2:-0.902804382597;GTF2A1,2:-0.925340665651;TEAD1:-0.944622860919;SOX{8,9,10}:-0.951682054418;NR6A1:-0.953451477404;HIC1:-1.01762574642;AR:-1.02806621292;GFI1B:-1.08497279946;ONECUT1,2:-1.12095505684;NRF1:-1.12558879501;IKZF1:-1.13115719786;ZNF143:-1.13403556135;ARID5B:-1.13898846103;REST:-1.15312498726;POU6F1:-1.15372129536;GTF2I:-1.18846606837;TOPORS:-1.19300085696;FOXM1:-1.20902400059;PRDM1:-1.21187836784;HOX{A4,D4}:-1.2275389645;UFEwm:-1.2282311081;TLX1..3_NFIC{dimer}:-1.24284526586;FOX{I1,J2}:-1.24883473574;XCPE1{core}:-1.27371797816;EBF1:-1.27380113266;TFAP2B:-1.28251956042;MTF1:-1.28801698167;KLF4:-1.30081638555;ADNP_IRX_SIX_ZHX:-1.33019038329;FOXL1:-1.34117657551;PATZ1:-1.34589801124;TEF:-1.3730466976;GATA4:-1.39096656892;bHLH_family:-1.39663884457;RBPJ:-1.41009820565;RREB1:-1.44938251406;HOX{A6,A7,B6,B7}:-1.47782745819;ZNF384:-1.47897006037;NR1H4:-1.48868316554;FOXD3:-1.50263761374;LEF1_TCF7_TCF7L1,2:-1.52212644074;ZNF238:-1.56073258436;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.5630918707;GZF1:-1.68254241863;T:-1.74370365162;TFAP4:-1.77009894657;PBX1:-1.82039993493;PDX1:-1.89239819597;DBP:-1.98100329815;ZNF423:-2.22959281669;RXR{A,B,G}:-2.82674107891
|top_motifs=NFKB1_REL_RELA:2.6578241477;CREB1:2.54825868468;ATF5_CREB3:2.50487662999;HSF1,2:2.32388151032;FOXN1:2.29992511255;JUN:2.09523632546;ATF4:2.09466218661;NANOG{mouse}:2.01863221224;TLX2:1.98585492075;SPI1:1.62589858563;PAX2:1.56050380238;FOXP3:1.54094506879;FOSL2:1.48397540523;SPIB:1.48350992749;RUNX1..3:1.42662025206;DMAP1_NCOR{1,2}_SMARC:1.28984636052;TGIF1:1.28149331303;ATF2:1.26196255894;RFX2..5_RFXANK_RFXAP:1.17325116111;HIF1A:1.17160565276;GLI1..3:1.05569693326;FOS_FOS{B,L1}_JUN{B,D}:1.05114850891;HMX1:1.03568823659;NFE2L1:0.957370172476;BACH2:0.953163738115;VSX1,2:0.928800602254;TBX4,5:0.907907566217;ETS1,2:0.906882294936;POU5F1:0.881820314628;SREBF1,2:0.880819468848;NKX2-2,8:0.830751384138;FOX{F1,F2,J1}:0.786914184457;MAFB:0.754257232517;ATF6:0.721772835661;ELF1,2,4:0.693047578288;NFIL3:0.679423133682;STAT1,3:0.677248041132;TBP:0.66335070091;FOXQ1:0.601783191253;ESRRA:0.583431032283;ZEB1:0.557789534686;CDX1,2,4:0.542741970724;IRF1,2:0.526105547827;EP300:0.525080993656;AHR_ARNT_ARNT2:0.503909137782;NFATC1..3:0.500457674684;BPTF:0.496973451642;NFE2:0.479796635506;EGR1..3:0.420997619836;NKX6-1,2:0.419128439715;FOX{D1,D2}:0.412752530643;PAX6:0.410468000128;POU1F1:0.368130530132;MYB:0.367421847657;EN1,2:0.330742930556;HOXA9_MEIS1:0.292465023893;ZBTB16:0.284826477479;NFE2L2:0.28188244534;SNAI1..3:0.26620807142;NANOG:0.252809582937;POU2F1..3:0.241067549419;PAX3,7:0.234714057725;CUX2:0.193024024472;NKX3-1:0.176231802048;STAT5{A,B}:0.157839394287;IRF7:0.15541171206;FOXA2:0.0925103932118;CEBPA,B_DDIT3:0.0922297293742;SOX2:0.0863550623262;RORA:0.083388973047;POU3F1..4:0.0736517033435;MED-1{core}:0.0623145230109;ALX1:0.043908559981;E2F1..5:0.0411399443718;HBP1_HMGB_SSRP1_UBTF:0.0225513458728;PAX8:0.000990719537141;SOX17:-0.0349581655987;PPARG:-0.0711938354221;SMAD1..7,9:-0.0771757788933;TFDP1:-0.091122322026;STAT2,4,6:-0.0952160930266;AIRE:-0.102403626266;ZBTB6:-0.130116919932;HES1:-0.143850916482;SPZ1:-0.212588079711;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.214230617139;MYFfamily:-0.217914528193;TFAP2{A,C}:-0.238366694187;FOXP1:-0.25351030248;MYOD1:-0.268625670175;MEF2{A,B,C,D}:-0.273242536004;ALX4:-0.274275517669;ZFP161:-0.282367743042;NKX2-1,4:-0.289785915455;NKX3-2:-0.29338688297;HNF4A_NR2F1,2:-0.303007332871;OCT4_SOX2{dimer}:-0.320211067503;ELK1,4_GABP{A,B1}:-0.339850602097;HOX{A5,B5}:-0.340119907573;RFX1:-0.350401118323;NFY{A,B,C}:-0.354514297578;XBP1:-0.36973807903;SRF:-0.387427002247;TP53:-0.388767712538;PAX1,9:-0.398051062461;GCM1,2:-0.400043312334;CDC5L:-0.404183861838;PAX4:-0.406724137985;BREu{core}:-0.408354460699;IKZF2:-0.414236476569;SP1:-0.433335090376;NFIX:-0.439150915752;LMO2:-0.474562838532;HLF:-0.49602763214;CRX:-0.496040386498;HNF1A:-0.506588154445;MZF1:-0.518371126688;HMGA1,2:-0.520086374859;MAZ:-0.540361012513;GATA6:-0.545040155276;LHX3,4:-0.553616358641;HAND1,2:-0.556294293729;PAX5:-0.5664352791;ZIC1..3:-0.592773197822;TAL1_TCF{3,4,12}:-0.610838869047;NKX2-3_NKX2-5:-0.62829215833;PITX1..3:-0.645536679012;MYBL2:-0.668574336263;NR3C1:-0.680800763547;ESR1:-0.724096383956;GFI1:-0.727612577823;ZNF148:-0.745758638031;NHLH1,2:-0.756798564864;RXRA_VDR{dimer}:-0.777936977711;EVI1:-0.780324085172;PRRX1,2:-0.782259809346;TFCP2:-0.827193523834;MTE{core}:-0.834971558643;SOX5:-0.838787305812;YY1:-0.862232991649;FOXO1,3,4:-0.865770917329;NR5A1,2:-0.902804382597;GTF2A1,2:-0.925340665651;TEAD1:-0.944622860919;SOX{8,9,10}:-0.951682054418;NR6A1:-0.953451477404;HIC1:-1.01762574642;AR:-1.02806621292;GFI1B:-1.08497279946;ONECUT1,2:-1.12095505684;NRF1:-1.12558879501;IKZF1:-1.13115719786;ZNF143:-1.13403556135;ARID5B:-1.13898846103;REST:-1.15312498726;POU6F1:-1.15372129536;GTF2I:-1.18846606837;TOPORS:-1.19300085696;FOXM1:-1.20902400059;PRDM1:-1.21187836784;HOX{A4,D4}:-1.2275389645;UFEwm:-1.2282311081;TLX1..3_NFIC{dimer}:-1.24284526586;FOX{I1,J2}:-1.24883473574;XCPE1{core}:-1.27371797816;EBF1:-1.27380113266;TFAP2B:-1.28251956042;MTF1:-1.28801698167;KLF4:-1.30081638555;ADNP_IRX_SIX_ZHX:-1.33019038329;FOXL1:-1.34117657551;PATZ1:-1.34589801124;TEF:-1.3730466976;GATA4:-1.39096656892;bHLH_family:-1.39663884457;RBPJ:-1.41009820565;RREB1:-1.44938251406;HOX{A6,A7,B6,B7}:-1.47782745819;ZNF384:-1.47897006037;NR1H4:-1.48868316554;FOXD3:-1.50263761374;LEF1_TCF7_TCF7L1,2:-1.52212644074;ZNF238:-1.56073258436;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.5630918707;GZF1:-1.68254241863;T:-1.74370365162;TFAP4:-1.77009894657;PBX1:-1.82039993493;PDX1:-1.89239819597;DBP:-1.98100329815;ZNF423:-2.22959281669;RXR{A,B,G}:-2.82674107891
|xref=
|xref=
}} {{DRAAccessionNumbers
|DRA_sample_Accession=CAGE@DRS008435
|accession_numbers=DRX008543;DRR009415;DRZ000840;DRZ002225;CAGE
|library_id=CNhs13537
}}
}}

Revision as of 17:46, 16 October 2013


Name:immature langerhans cells, donor1
Species:Human (Homo sapiens)
Library ID:{{{library_id}}}
Sample type:primary cells
Genomic View: UCSC
CAGEd-oPOSSUM:link
Additional information
Sample information
strainNA
tissueNA
dev stageNA
sexNA
ageNA
cell typelangerhans cell
cell lineNA
companyNA
collaborationTeunis Geijtenbeek
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberLC-I
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  DRS008435
Library accession numbers

Library idMethodExp. accession idRun accession id
{{{library_id}}} {{{accession_numbers}}}
Accession ID Hg19

Library idBAMCTSS
{{{library_id}}}
Download raw sequence, BAM & CTSS
Hg19
BAMCTSS
[{{{hg19bam}}} download][{{{hg19ctss}}} donwload]
Hg38
BAMCTSS
[{{{hg38bam}}} download][{{{hg38ctss}}} donwload]


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0.0881
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.0608
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340.683
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.191
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40.0449
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.0881
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0881
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.224
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0.0881
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.273
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.424
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.0807
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage1.046
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.0672
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0.0103
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.157
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.161
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.0881
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte0.049
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0.0276
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.0375
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.306
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.683
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.348
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.224
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.268
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.224
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.568
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0.0906
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.277
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.191
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.295
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.0881
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.224
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.0881
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.193
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.11
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0.327
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.0881
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.161
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast1.133
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.0881
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13537

Jaspar motifP-value
MA0002.25.63753e-4
MA0003.10.303
MA0004.10.84
MA0006.10.408
MA0007.10.346
MA0009.10.154
MA0014.10.513
MA0017.10.77
MA0018.21.70956e-10
MA0019.10.586
MA0024.10.338
MA0025.10.0114
MA0027.10.953
MA0028.10.913
MA0029.10.24
MA0030.10.809
MA0031.10.649
MA0035.20.496
MA0038.10.334
MA0039.20.127
MA0040.10.797
MA0041.10.971
MA0042.10.844
MA0043.11.41157e-5
MA0046.10.461
MA0047.20.531
MA0048.10.789
MA0050.10.608
MA0051.10.571
MA0052.10.295
MA0055.10.679
MA0057.10.141
MA0058.10.888
MA0059.10.334
MA0060.10.0243
MA0061.13.4221e-30
MA0062.20.00573
MA0065.20.875
MA0066.10.656
MA0067.11.65269e-8
MA0068.10.338
MA0069.10.416
MA0070.10.0632
MA0071.10.938
MA0072.10.88
MA0073.10.519
MA0074.10.892
MA0076.10.5
MA0077.10.268
MA0078.10.739
MA0079.20.946
MA0080.22.94005e-13
MA0081.14.94492e-4
MA0083.10.901
MA0084.10.817
MA0087.10.214
MA0088.10.224
MA0090.10.00346
MA0091.10.756
MA0092.10.843
MA0093.10.828
MA0099.25.51161e-22
MA0100.10.789
MA0101.12.09668e-34
MA0102.20.0287
MA0103.10.826
MA0104.20.511
MA0105.13.21911e-20
MA0106.10.138
MA0107.19.09012e-36
MA0108.20.48
MA0111.10.848
MA0112.20.148
MA0113.10.815
MA0114.10.793
MA0115.10.832
MA0116.10.0333
MA0117.10.00131
MA0119.10.417
MA0122.10.496
MA0124.10.414
MA0125.10.282
MA0131.10.327
MA0135.10.859
MA0136.17.51311e-15
MA0137.20.763
MA0138.20.248
MA0139.10.658
MA0140.10.375
MA0141.10.824
MA0142.10.703
MA0143.10.802
MA0144.10.761
MA0145.10.903
MA0146.10.695
MA0147.10.344
MA0148.10.377
MA0149.10.404
MA0150.14.05598e-6
MA0152.10.564
MA0153.10.00171
MA0154.10.00883
MA0155.10.0107
MA0156.11.81059e-5
MA0157.10.476
MA0159.10.921
MA0160.10.0993
MA0162.10.023
MA0163.10.025
MA0164.10.65
MA0258.10.603
MA0259.10.71



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs13537

Novel motifP-value
10.339
100.0186
1000.358
1010.561
1020.657
1030.0465
1040.669
1050.482
1064.93165e-4
1070.734
1080.771
1090.364
110.779
1100.825
1110.684
1120.128
1130.738
1140.705
1150.0642
1160.412
1170.12
1180.322
1190.887
120.506
1200.71
1210.265
1220.176
1230.67
1240.582
1250.329
1260.0129
1270.39
1280.277
1290.748
130.0101
1300.938
1310.722
1320.0197
1330.173
1340.464
1350.361
1360.129
1370.00102
1380.791
1390.549
140.975
1400.0514
1410.573
1420.981
1430.316
1440.516
1450.259
1460.382
1470.0796
1480.00733
1490.202
150.272
1500.231
1510.538
1520.241
1530.353
1540.204
1550.0541
1560.521
1570.456
1580.144
1590.298
160.806
1600.258
1610.669
1620.0574
1630.158
1640.098
1650.17
1660.154
1670.763
1680.467
1690.871
170.637
180.692
190.529
20.442
200.083
210.613
220.578
230.415
240.108
250.295
260.525
270.148
280.497
290.0775
30.482
300.703
310.549
320.00985
330.0901
340.549
350.356
360.281
370.199
380.739
390.793
40.679
400.703
410.223
420.543
430.261
440.412
450.952
460.75
470.702
480.814
490.283
50.542
500.987
510.529
520.165
530.948
540.884
550.908
560.579
570.867
580.18
590.573
60.805
600.131
610.942
620.264
630.866
640.737
650.856
660.732
670.934
680.0822
690.0151
70.21
700.585
710.0555
720.0183
730.247
740.115
750.183
760.0679
770.617
780.00608
790.773
80.396
800.97
810.489
820.605
830.0148
840.0632
850.243
860.0632
870.137
880.182
890.622
90.796
900.0312
910.5
920.395
930.39
940.161
950.26
960.267
970.581
980.531
998.16441e-5



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs13537


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000219 (motile cell)
0000738 (leukocyte)
0000990 (conventional dendritic cell)
0000255 (eukaryotic cell)
0000451 (dendritic cell)
0000453 (Langerhans cell)
0000840 (immature conventional dendritic cell)
0001014 (CD1a-positive Langerhans cell)
0001016 (immature CD1a-positive Langerhans cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0011135 (human immature langerhans cells sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

{{{1}}} Accession numbers
MethodSample accession id
{{{2}}} 
Library accession numbers

Library idMethodExp. accession idRun accession id
{{{4}}} {{{3}}}
Accession ID

Library idBAMCTSS
{{{4}}}
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