FFCP PHASE1:Hg19::chr1:42800836..42800847,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22887 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29178 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UPW0 | |||
|association_with_transcript=38bp_to_NM_001198852_5end | |||
|description=CAGE_peak_3_at_FOXJ3_5end | |||
|id=chr1:42800836..42800847,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.54e-12!235;DOID:14566!7.19e-11!239;DOID:0050686!1.46e-07!137;DOID:0050687!3.19e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.16e-10,235;DOID:14566,8.23e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.63e-15!94;UBERON:0001016!7.63e-15!94;UBERON:0001017!1.66e-14!82;UBERON:0005743!9.02e-14!86;UBERON:0001049!9.62e-14!57;UBERON:0005068!9.62e-14!57;UBERON:0006241!9.62e-14!57;UBERON:0007135!9.62e-14!57;UBERON:0002020!1.91e-12!34;UBERON:0003528!1.91e-12!34;UBERON:0001893!3.72e-12!34;UBERON:0002791!1.02e-11!33;UBERON:0001869!1.12e-11!32;UBERON:0002780!1.67e-11!41;UBERON:0001890!1.67e-11!41;UBERON:0006240!1.67e-11!41;UBERON:0000955!1.77e-11!69;UBERON:0006238!1.77e-11!69;UBERON:0002616!3.85e-11!59;UBERON:0003080!3.96e-11!42;UBERON:0007023!1.21e-09!115;UBERON:0000956!3.67e-09!25;UBERON:0000203!3.67e-09!25;UBERON:0002346!5.01e-09!90;UBERON:0002619!8.44e-09!22;UBERON:0003075!1.68e-08!86;UBERON:0007284!1.68e-08!86;UBERON:0001950!7.63e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.81e-11;34!UBERON:0002020;1.81e-11;34!UBERON:0002791;2.48e-11;32!UBERON:0001893;2.71e-11;34!UBERON:0001869;3.26e-11;32!UBERON:0002780;8.44e-10;41!UBERON:0001890;8.44e-10;41!UBERON:0000956;1.69e-09;25!UBERON:0000203;1.69e-09;25!UBERON:0002619;2.57e-09;22!UBERON:0000073;5.19e-09;53!UBERON:0002616;5.19e-09;53!UBERON:0001950;3.37e-08;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.95e-17,89;UBERON:0001017,1.24e-16,81;UBERON:0001049,2.82e-16,56;UBERON:0005068,2.82e-16,56;UBERON:0006241,2.82e-16,56;UBERON:0007135,2.82e-16,56;UBERON:0000073,4.42e-16,53;UBERON:0002616,4.42e-16,53;UBERON:0003528,2.80e-14,34;UBERON:0002020,2.80e-14,34;UBERON:0002780,5.78e-14,41;UBERON:0001890,5.78e-14,41;UBERON:0003080,5.78e-14,41;UBERON:0006240,5.78e-14,41;UBERON:0001893,6.14e-14,34;UBERON:0000955,1.73e-13,68;UBERON:0006238,1.73e-13,68;UBERON:0002791,2.00e-13,32;UBERON:0001869,2.27e-13,32;UBERON:0002346,3.92e-12,86;UBERON:0003075,7.85e-12,82;UBERON:0007284,7.85e-12,82;UBERON:0007023,1.57e-10,114;UBERON:0000956,2.10e-10,25;UBERON:0000203,2.10e-10,25;UBERON:0002619,5.68e-10,22;UBERON:0010371,1.22e-09,104;UBERON:0003056,2.99e-09,61;UBERON:0001950,7.56e-09,20;UBERON:0011216,5.23e-07,223 | |||
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| |||
|short_description=p3@FOXJ3 | |||
}} |
Revision as of 18:08, 10 January 2014
Short description: | p3@FOXJ3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FOXJ3_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_NM_001198852_5end |
EntrezGene: | FOXJ3 |
HGNC: | 29178 |
UniProt: | Q9UPW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 5.95e-17 | 89 |
central nervous system | 1.24e-16 | 81 |
neural tube | 2.82e-16 | 56 |
neural rod | 2.82e-16 | 56 |
future spinal cord | 2.82e-16 | 56 |
neural keel | 2.82e-16 | 56 |
regional part of nervous system | 4.42e-16 | 53 |
regional part of brain | 4.42e-16 | 53 |
brain grey matter | 2.80e-14 | 34 |
gray matter | 2.80e-14 | 34 |
regional part of forebrain | 5.78e-14 | 41 |
forebrain | 5.78e-14 | 41 |
anterior neural tube | 5.78e-14 | 41 |
future forebrain | 5.78e-14 | 41 |
telencephalon | 6.14e-14 | 34 |
brain | 1.73e-13 | 68 |
future brain | 1.73e-13 | 68 |
regional part of telencephalon | 2.00e-13 | 32 |
cerebral hemisphere | 2.27e-13 | 32 |
neurectoderm | 3.92e-12 | 86 |
neural plate | 7.85e-12 | 82 |
presumptive neural plate | 7.85e-12 | 82 |
adult organism | 1.57e-10 | 114 |
cerebral cortex | 2.10e-10 | 25 |
pallium | 2.10e-10 | 25 |
regional part of cerebral cortex | 5.68e-10 | 22 |
ecto-epithelium | 1.22e-09 | 104 |
pre-chordal neural plate | 2.99e-09 | 61 |
neocortex | 7.56e-09 | 20 |
organ system subdivision | 5.23e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.16e-10 | 235 |
disease of cellular proliferation | 8.23e-09 | 239 |