FFCP PHASE1:Hg19::chr1:44482876..44482891,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6536 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11056 | |||
|TSSclassifier=weak | |||
|UniProt=P48067 | |||
|association_with_transcript=105bp_to_ENST00000357730,ENST00000360584,NM_006934,NM_201649,uc001cll.2,uc001clm.2,uc009vxd.2,uc010okn.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_9_at_SLC6A9_5end | |||
|id=chr1:44482876..44482891,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.69e-12;82!UBERON:0006241;1.84e-11;3!UBERON:0003057;1.84e-11;3!UBERON:0003056;2.09e-11;3!UBERON:0005425;1.60e-09;1!UBERON:0006222;2.60e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.05e-102!57;UBERON:0005068!2.05e-102!57;UBERON:0006241!2.05e-102!57;UBERON:0007135!2.05e-102!57;UBERON:0001017!5.20e-90!82;UBERON:0005743!2.29e-89!86;UBERON:0002616!3.00e-84!59;UBERON:0000073!7.14e-84!94;UBERON:0001016!7.14e-84!94;UBERON:0000955!9.88e-78!69;UBERON:0006238!9.88e-78!69;UBERON:0002780!7.83e-77!41;UBERON:0001890!7.83e-77!41;UBERON:0006240!7.83e-77!41;UBERON:0003075!6.92e-75!86;UBERON:0007284!6.92e-75!86;UBERON:0003080!7.50e-75!42;UBERON:0002346!4.02e-71!90;UBERON:0002020!2.11e-70!34;UBERON:0003528!2.11e-70!34;UBERON:0001893!2.49e-70!34;UBERON:0002791!4.03e-67!33;UBERON:0001869!1.61e-63!32;UBERON:0003056!3.31e-56!61;UBERON:0007023!2.39e-52!115;UBERON:0000033!1.63e-46!123;UBERON:0004121!2.76e-44!169;UBERON:0000153!6.77e-44!129;UBERON:0007811!6.77e-44!129;UBERON:0000924!5.10e-43!173;UBERON:0006601!5.10e-43!173;UBERON:0000956!2.44e-42!25;UBERON:0000203!2.44e-42!25;UBERON:0002619!7.50e-39!22;UBERON:0001950!3.55e-33!20;UBERON:0002308!5.45e-31!9;UBERON:0000125!5.45e-31!9;UBERON:0002420!2.20e-30!9;UBERON:0007245!2.20e-30!9;UBERON:0010009!2.20e-30!9;UBERON:0010011!2.20e-30!9;UBERON:0000454!2.20e-30!9;UBERON:0003076!4.72e-27!15;UBERON:0003057!4.72e-27!15;UBERON:0009663!4.27e-24!7;UBERON:0000025!3.51e-23!194;UBERON:0002298!2.00e-22!8;UBERON:0004732!2.42e-21!13;UBERON:0004733!3.16e-18!12;UBERON:0002028!3.16e-18!12;UBERON:0007277!3.16e-18!12;UBERON:0000349!3.12e-17!5;UBERON:0004111!1.09e-16!241;UBERON:0001871!7.83e-15!7;UBERON:0000200!4.42e-14!6;UBERON:0000369!6.94e-14!4;UBERON:0002435!6.94e-14!4;UBERON:0000204!6.94e-14!4;UBERON:0010082!6.94e-14!4;UBERON:0000064!1.34e-13!219;UBERON:0000477!2.25e-13!286;UBERON:0000483!2.72e-13!309;UBERON:0000119!4.61e-13!312;UBERON:0000475!9.79e-13!365;UBERON:0006331!3.67e-12!3;UBERON:0000988!5.28e-12!3;UBERON:0001896!5.28e-12!3;UBERON:0005290!5.28e-12!3;UBERON:0010096!5.28e-12!3;UBERON:0002240!1.91e-11!3;UBERON:0002021!1.97e-11!5;UBERON:0005383!9.73e-11!3;UBERON:0005382!9.73e-11!3;UBERON:0002771!1.19e-10!3;UBERON:0002680!9.63e-10!9;UBERON:0001895!9.63e-10!9;UBERON:0010092!9.63e-10!9;UBERON:0005162!7.67e-09!2;UBERON:0000122!7.67e-09!2;UBERON:0002148!1.29e-08!2;UBERON:0009662!1.29e-08!2;UBERON:0001897!1.44e-08!2;UBERON:0001894!1.72e-08!7;UBERON:0006222!1.72e-08!7;UBERON:0001875!1.99e-08!2;UBERON:0006514!1.99e-08!2;UBERON:0000062!2.87e-08!511;UBERON:0001876!5.40e-08!2;UBERON:0001954!8.79e-08!2;UBERON:0003022!8.79e-08!2;UBERON:0002421!8.79e-08!2;UBERON:0002600!8.79e-08!2;UBERON:0001873!9.10e-08!2;UBERON:0010122!9.10e-08!2;UBERON:0005174!5.10e-07!5;UBERON:0001137!5.10e-07!5;UBERON:0001872!7.83e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.95e-46;6!UBERON:0004732;6.98e-29;13!UBERON:0000073;3.38e-25;53!UBERON:0002616;3.38e-25;53!UBERON:0001896;3.76e-24;3!UBERON:0005290;3.76e-24;3!UBERON:0000988;4.23e-24;3!UBERON:0004733;4.85e-23;12!UBERON:0002028;4.85e-23;12!UBERON:0000125;1.18e-21;9!UBERON:0002308;1.18e-21;9!UBERON:0001017;2.88e-18;75!UBERON:0005162;3.16e-17;2!UBERON:0000122;3.16e-17;2!UBERON:0002780;3.31e-17;41!UBERON:0001890;3.31e-17;41!UBERON:0002148;1.00e-16;2!UBERON:0006331;1.00e-16;2!UBERON:0009662;1.00e-16;2!UBERON:0001897;1.48e-16;2!UBERON:0010225;1.48e-16;2!UBERON:0001875;1.95e-16;2!UBERON:0006514;1.95e-16;2!UBERON:0001016;1.87e-15;83!UBERON:0000955;1.59e-13;68!UBERON:0001893;4.21e-13;34!UBERON:0007023;1.59e-12;114!UBERON:0002240;1.84e-11;3!UBERON:0005174;1.84e-11;3!UBERON:0001137;1.84e-11;3!UBERON:0001894;1.18e-10;7!UBERON:0009663;1.18e-10;7!UBERON:0003528;1.49e-10;34!UBERON:0002020;1.49e-10;34!UBERON:0002791;1.08e-09;32!UBERON:0000941;1.60e-09;1!UBERON:0001785;1.60e-09;1!UBERON:0002464;1.60e-09;1!UBERON:0004904;1.60e-09;1!UBERON:0001021;1.60e-09;1!UBERON:0002336;1.96e-09;1!UBERON:0002038;1.96e-09;1!UBERON:0011215;1.96e-09;1!UBERON:0001018;1.96e-09;1!UBERON:0009661;1.96e-09;1!UBERON:0002950;1.96e-09;1!UBERON:0002473;1.96e-09;1!UBERON:0005340;1.96e-09;1!UBERON:0003544;1.96e-09;1!UBERON:0005970;1.96e-09;1!UBERON:0002316;1.96e-09;1!UBERON:0001020;1.96e-09;1!UBERON:0001891;1.96e-09;1!UBERON:0002437;1.96e-09;1!UBERON:0001869;3.68e-09;32!UBERON:0007190;7.55e-09;1!UBERON:0002784;9.93e-09;4!UBERON:0002680;2.15e-08;9!UBERON:0002420;2.15e-08;9!UBERON:0007245;2.15e-08;9!UBERON:0010009;2.15e-08;9!UBERON:0001895;2.15e-08;9!UBERON:0010011;2.15e-08;9!UBERON:0000454;2.15e-08;9!UBERON:0002021;6.37e-07;5!UBERON:0011216;9.34e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.32e-50,56;UBERON:0005068,1.32e-50,56;UBERON:0006241,1.32e-50,56;UBERON:0007135,1.32e-50,56;UBERON:0002298,2.58e-46,6;UBERON:0001017,2.68e-45,81;UBERON:0001016,1.71e-44,89;UBERON:0000073,5.81e-43,53;UBERON:0002616,5.81e-43,53;UBERON:0003075,2.60e-41,82;UBERON:0007284,2.60e-41,82;UBERON:0000955,1.91e-40,68;UBERON:0006238,1.91e-40,68;UBERON:0002346,3.03e-39,86;UBERON:0003076,3.17e-32,15;UBERON:0003057,3.17e-32,15;UBERON:0007023,4.26e-32,114;UBERON:0010371,6.90e-32,104;UBERON:0004732,8.09e-29,13;UBERON:0010314,2.17e-24,132;UBERON:0002780,3.36e-24,41;UBERON:0001890,3.36e-24,41;UBERON:0003080,3.36e-24,41;UBERON:0006240,3.36e-24,41;UBERON:0000988,4.58e-24,3;UBERON:0001896,4.58e-24,3;UBERON:0005290,4.58e-24,3;UBERON:0010096,4.58e-24,3;UBERON:0004121,8.06e-24,171;UBERON:0000924,8.06e-24,171;UBERON:0006601,8.06e-24,171;UBERON:0004733,5.56e-23,12;UBERON:0002028,5.56e-23,12;UBERON:0007277,5.56e-23,12;UBERON:0003056,9.63e-22,61;UBERON:0000125,1.29e-21,9;UBERON:0002308,1.29e-21,9;UBERON:0005162,3.04e-17,2;UBERON:0000122,3.04e-17,2;UBERON:0002148,9.26e-17,2;UBERON:0006331,9.26e-17,2;UBERON:0009662,9.26e-17,2;UBERON:0001897,1.17e-16,2;UBERON:0010225,1.17e-16,2;UBERON:0003528,2.18e-16,34;UBERON:0002020,2.18e-16,34;UBERON:0001875,2.37e-16,2;UBERON:0006514,2.37e-16,2;UBERON:0001893,2.44e-16,34;UBERON:0011216,1.02e-15,223;UBERON:0000025,1.92e-12,192;UBERON:0002240,1.94e-11,3;UBERON:0005174,1.94e-11,3;UBERON:0001137,1.94e-11,3;UBERON:0001894,1.14e-10,7;UBERON:0006222,1.14e-10,7;UBERON:0009663,1.30e-10,7;UBERON:0002791,1.51e-10,32;UBERON:0001869,1.96e-10,32;UBERON:0000941,1.60e-09,1;UBERON:0001785,1.60e-09,1;UBERON:0002464,1.60e-09,1;UBERON:0004904,1.60e-09,1;UBERON:0001021,1.60e-09,1;UBERON:0003902,1.60e-09,1;UBERON:0005425,1.60e-09,1;UBERON:0002336,1.89e-09,1;UBERON:0011215,1.89e-09,1;UBERON:0001018,1.89e-09,1;UBERON:0002473,1.89e-09,1;UBERON:0005340,1.89e-09,1;UBERON:0003544,1.89e-09,1;UBERON:0005970,1.89e-09,1;UBERON:0002316,1.89e-09,1;UBERON:0001020,1.89e-09,1;UBERON:0002437,1.89e-09,1;UBERON:0002038,2.04e-09,1;UBERON:0009661,2.04e-09,1;UBERON:0002950,2.04e-09,1;UBERON:0001891,2.04e-09,1;UBERON:0009616,2.04e-09,1;UBERON:0010286,2.04e-09,1;UBERON:0004111,3.11e-09,240;UBERON:0007190,7.85e-09,1;UBERON:0002784,8.85e-09,4;UBERON:0002680,2.20e-08,9;UBERON:0001895,2.20e-08,9;UBERON:0010092,2.20e-08,9;UBERON:0000483,2.31e-08,306;UBERON:0002420,2.32e-08,9;UBERON:0007245,2.32e-08,9;UBERON:0010009,2.32e-08,9;UBERON:0010011,2.32e-08,9;UBERON:0000454,2.32e-08,9;UBERON:0000119,3.04e-08,309;UBERON:0002021,5.48e-07,5 | |||
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|short_description=p9@SLC6A9 | |||
}} |
Revision as of 18:15, 10 January 2014
Short description: | p9@SLC6A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLC6A9_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 105bp_to_ENST00000357730, ENST00000360584, NM_006934, NM_201649, uc001cll.2, uc001clm.2, uc009vxd.2, uc010okn.1_5end |
EntrezGene: | SLC6A9 |
HGNC: | 11056 |
UniProt: | P48067 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data