FFCP PHASE1:Hg19::chr10:72977780..72977801,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=728978 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=183bp_to_NR_038453_5end | |||
|description=CAGE_peak_1_at_LOC728978_5end | |||
|id=chr10:72977780..72977801,- | |||
|ontology_enrichment_celltype=CL:0000066!2.31e-12!254;CL:0002076!7.90e-10!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.73e-10;42!CL:0002251;1.69e-09;20!CL:0002178;4.30e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.36e-15,253;CL:0002076,4.20e-15,42;CL:0000076,1.81e-11,63;CL:0000223,1.56e-10,58;CL:0002251,1.50e-09,20;CL:0002178,5.09e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.84e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.39e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.90e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0000464!2.18e-08!104;UBERON:0000064!3.29e-08!219;UBERON:0005181!2.61e-07!35;UBERON:0005157!5.11e-07!51;UBERON:0005178!8.62e-07!34;UBERON:0002224!8.62e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;3.02e-08;6!UBERON:0003343;3.93e-08;4!UBERON:0004785;3.93e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,3.40e-09,74;UBERON:0003343,2.38e-08,4;UBERON:0004785,2.38e-08,4;UBERON:0000065,1.39e-07,54;UBERON:0006562,2.71e-07,11 | |||
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| |||
|short_description=p1@LOC728978 | |||
}} |
Revision as of 03:21, 11 January 2014
Short description: | p1@LOC728978 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC728978_5end |
Coexpression cluster: | NA |
Association with transcript: | 183bp_to_NR_038453_5end |
EntrezGene: | LOC728978 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.36e-15 | 253 |
endo-epithelial cell | 4.20e-15 | 42 |
squamous epithelial cell | 1.81e-11 | 63 |
endodermal cell | 1.56e-10 | 58 |
epithelial cell of alimentary canal | 1.50e-09 | 20 |
epithelial cell of stomach | 5.09e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 3.40e-09 | 74 |
mucosa of oral region | 2.38e-08 | 4 |
respiratory system mucosa | 2.38e-08 | 4 |
respiratory tract | 1.39e-07 | 54 |
pharynx | 2.71e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.90e-12 | 14 |