FFCP PHASE1:Hg19::chr10:96305516..96305531,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3070 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4861 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_uc001kjs.2_5end | |||
|coexpression_cluster_id=C3061 | |||
|description=CAGE_peak_2_at_HELLS_5end | |||
|id=chr10:96305516..96305531,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.34e-14!53;CL:0000051!1.34e-14!53;CL:0000838!4.24e-14!52;CL:0000945!5.81e-10!24;CL:0000826!5.81e-10!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.15e-10;24!CL:0000542;4.66e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.77e-15,53;CL:0000051,7.77e-15,53;CL:0000838,2.69e-14,52;CL:0000945,7.87e-11,24;CL:0000826,7.87e-11,24 | |||
|ontology_enrichment_development_v019=CL:0000051;4.66e-09;53 | |||
|ontology_enrichment_disease=DOID:162!2.91e-35!235;DOID:14566!1.45e-33!239;DOID:0050687!1.57e-24!143;DOID:305!1.63e-21!106;DOID:0050686!8.38e-18!137;DOID:2531!5.91e-11!51;DOID:0060083!5.91e-11!51;DOID:1240!9.41e-08!39 | |||
|ontology_enrichment_disease_v019=DOID:305;1.42e-07;106!DOID:2531;5.21e-07;51!DOID:0060083;5.21e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,8.78e-34,235;DOID:14566,1.01e-32,239;DOID:0050687,2.09e-24,143;DOID:305,3.23e-22,106;DOID:0050686,2.44e-17,137;DOID:2531,1.40e-10,51;DOID:0060083,1.40e-10,51;DOID:1240,1.82e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.422863212287913,0,0,0,2.53299878168311,0,0,0.245733936501509,0.697801167972428,1.09220686065086,0,0.495065411840187,0.331397375727916,0,0.602694528023977,0,0.975865597581014,1.47745269692145,1.83600622119828,0.313454721478088,2.0036519099174,2.87436292653057,3.26410862946487,6.49513948857586,5.33653831424647,8.89431828844575,0,2.30297638858328,0.154816123316076,0.919421224478927,0.6024118375565,0.739508020333575,10.6904736800816,7.96147701929561,4.40400659002271,1.10799081706375,0.200544447470142,0,0.447830948479849,0.971680998056939,0.515151135268373,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0,0,0.376484679085209,0,0,0,0,0.639337125799041,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0.217188844705117,1.21079900526674,0.368277635987565,0,0,0,0.419317291016752,0.112328631146495,0,0.32145117339416,0.285012743741249,0,1.27864907635244,3.51992488922645,7.09980194640771,5.33705552318133,3.84057200309856,3.60356388332411,3.4485146397269,2.64417949113945,1.90810750907073,1.1384259382189,4.11066032559657,5.3518251937532,2.64342657158052,1.12101712596307,2.63384084775077,2.16380747125216,1.57204305099666,1.85041349099558,9.36244374187797,2.60737813306872,1.89379122293893,1.94826728407911,5.34770193048833,7.07054177939609,5.75988125917415,6.49929273036037,2.43373507478783,3.90178042679635,4.27538551969558,2.21080014228679,1.44901542867526,1.77943875794473,1.33770414044857,2.09071047609954,4.87230173599535,5.3650869104269,4.46715679127419,5.06039384039006,2.86708872891687,3.25541726928209,1.90090408889675,2.25862678616659,3.83959833463255,3.74792179657038,3.07810427657222,4.92676798152628,1.81446068902259,2.94184215361858,1.30341963494519,0,0,0.383587685530591,0.361439152384566,0.50133791063589,0.144846518960824,0.795285947051099,0,3.40325341790644,0.221729397462564,1.66886092816939,2.88153966094968,0.728590576585084,0.370784442784429,0,0.174129737299267,0,0.953962497221368,1.71598473234038,1.48583000531826,1.19257444420023,0,0,1.13061588384802,2.51699661725944,0.550236083880135,1.04497483268405,0.258416759169329,0.71153252537342,1.00416183829401,0,0.760272105718513,0,2.94130464276695,0,3.66128885964727,2.46982309888787,3.60356737546631,0,0,0.549605231791222,0,0,0.436094052142534,0.496971951695318,0.886413581652058,0.794455084879313,0.573673241497627,0.709336764396714,0.560677600142307,1.06748995729705,0,1.55605517699883,0.942974704487816,1.14423332179421,0.605429710579726,0,0.70296429550139,0,0.570471821544449,0.149448680551801,2.81842796745036,2.91371299862637,4.3539750077697,1.02077085627447,2.33385202892359,0.413303124703062,1.18800285728205,0.247266929278557,0.910161361938026,0.718618141816238,4.20840284885166,2.62748891731125,2.77064115484183,0.438977620880838,0.919463387397059,0.300476117813194,1.13432183160021,3.04962380671065,0.640672166455702,0.635795703478686,2.70081986475962,1.64884046781502,0.257640540045629,0.18611685633159,6.91982962189192,1.65642908774038,1.51460264546469,0.460249493211497,0.646584227275248,1.06502877754984,0.806016785821122,1.01736355386293,1.15956511897978,1.36373060295417,2.29443676311203,11.8314494945708,15.1083935886493,10.6898427439957,9.1221728413526,9.33587148239825,11.6792754904266,0,0,0,0.464367928031979,1.44375896333917,5.91534000199219,3.03452442140583,4.09718750801919,3.97058301836618,3.26819166138609,3.55905928666645,4.1797705529651,2.5508790466295,3.46272441251751,0.738155454624648,0,0,0,1.26755034821831,0,1.18157981336281,10.5951143859516,2.09080345523293,0.686271241194102,1.20725313949488,0,1.60846355858609,1.66659201285353,0.325808305310325,0,0,1.73895607462615,0.939269553886573,0.433099343283221,0,0.380508304469197,0.790204397959275,0,0.492434012174795,0.468008530278475,0.594524649154913,0.93733833986777,0.16798212819886,1.98485136139341,1.16426079513703,3.19697332365358,1.15014803749563,0.492663237895943,0.44024217006613,0,0.144119953416961,0,2.73040945456327,1.52795370223311,1.17217447210047,0,1.64523988325318,0.901029173531752,0.857479297891735,2.13049060256185,1.74384027533312,2.12681028880755,0.646358578788889,0,0,0,1.04007436911366,1.28603687131071,0,0.266422179016099,0.57191197463259,0,0.823240336780769,1.30294473717494,1.06617584622764,1.58390374586686,0.301439377059586,0,0.599837947092342,1.2162378064119,0.502257091432126,0,0.718874566474748,0,7.13184525203592,0.723906533337896,0.205476322550383,2.86497541183833,2.91421374383171,2.36436912242313,0.862510299438069,0.898401253958239,2.28685161800217,5.20559415430487,0.773288812777695,0.670065061337395,3.18969375826582,0.749007023947182,0,0,0.736148950314839,0,0.813795071099207,1.03985430765404,0.535286966391485,0.157702415033935,0.819989904948992,0,0,0,0.664225598535437,0.553107505625109,1.21637060255316,0.195801157462741,0,1.03384013061444,1.2942852049117,1.70764092485511,0.303127571446259,0,1.20956117331872,0.496215615637554,1.07423381301644,0.561320188866147,0.384417447767103,0.511707249066704,0.482561763430822,0,1.69630663182921,0.532685175939381,2.46381468041427,1.03850885836724,1.85936605535935,3.2632051389738,0.40101294060657,0.644566922551274,1.14814448164607,0.364182336013434,0.262248829918848,1.80479845162965,1.07821471946181,0.784349769176855,0,0.949964660035881,2.27466768141793,0.850468526382578,2.80690690932781,0,0.541892875087706,0,1.27438136522519,0.831076008928724,0.671624264166535,2.63111851975121,3.66009631434861,1.02580050046556,0.328014645699706,0.650756789328606,1.13345112812495,2.1060976908219,2.31026599777646,0.574265537996172,0.650060246036521,0,0.773365746336976,2.31072925671967,2.6095624703442,2.20538515975249,1.71872391789238,1.59518363305651,2.55679882248303,0.267096106940212,0.495854746082934,0.768760269460425,2.67986696238627,0.10115778085555,0,1.5740617341532,0.6970372701606,0.616067160352178,0,0,0.37064843820784,0,3.34942532423701,1.58189712359363,0.953150969619124,0.255897791311334,0,0.636406495851874,0.78494864019923,1.07923474549989,1.09814811894422,1.17812402345686,0,0,0,0,0,1.05650146756755,1.9109987597118,0.424216295861138,2.26016233240486,0.551365343546124,0,0,0,0,0.202910376962704,0.30982349809975,0.563391205064483,1.72093622644862,0.294747123039363,0,1.77380532035299,0,0.329294892959902,0.75894634753143,0,0.384888450902048,1.34060455107157,0,0.941438007767792,0,0,0.443430153536676,0.459446800413919,0.507447609232169,0,1.13929437434833,2.62054953003568,0.822724546172388,0,2.16012574895246,1.58625035258854,3.20472213382419,4.81239927631679,5.63592496756373,6.31730795427444,7.64626828775158,5.62020562452471,5.26106700005114,3.39284931435788,3.06408592211787,2.32840940996271,2.59697552219644,5.05434920604226,2.51058146936511,2.35019843659535,10.0253790836027,6.09450400085772,3.85411380248879,2.82519590067467,7.66523227842587,2.40453741329035,3.99412993600995,2.46043718681657,2.33588798396672,2.54004524022652,3.34087408674291,11.0778659052941,1.89318974933188,5.66222345596294,4.22961015263549,1.30998378285754,0.439524537815682,11.0438074792057,2.563197838382,2.84136146806413,0,1.78178808499583,1.22864280839693,0.994147647766298,0.562677665642051,0.779160935160341,0.988823245360557,4.64475897881586,0.796991953004279,4.42054264849836,3.27512572210559,3.88620993508188,6.52349468943668,0.311039587661807,3.77447074818773,0.895105873378046,1.02314474045374,0.789147245095469,0,5.55684950723184,0,0.649376687132959,0,5.4689829827899,2.71125999988207,0,6.48622655227348,4.32231205497703,4.01859059005492,3.79217710565611,2.04123229368278,7.29224978719828,0,0.361789315876224,6.10326945268333,6.52417633594225,2.06883333267483,1.31631238292384,3.2681539055697,1.67308493134324,1.84680620409113,1.25336261431701,9.91424788868659,4.8469127981277,1.95565269459615,0.638002319463839,1.19076871422421,0,3.06579894587209,0.941881538370149,1.16348177330109,0.451191321234361,0.784250137270958,0.839107934879214,1.51802986179348,1.58936578980379,1.26598838716816,2.12202650606892,6.50224128596128,3.46221823587346,0.995261931078505,0.973033209536731,0.611030144933625,3.26173241548684,3.45979029050208,5.22109747527277,0.337005664903385,0.802577647298789,0.468528891450678,6.38591762254831,3.91329237864179,6.31228986788641,2.36750641709634,1.20990716048664,3.36680037793539,2.02197054811161,2.55549813004637,4.04383946449264,6.64653872707185,1.65495977937749,6.27865836814451,3.58417289318877,4.55375273647668,3.32819215231533,1.90915712168644,3.33174151208884,5.31061160140456,3.4945333648406,1.54787429224455,4.45079123929792,4.89698424477443,6.15865927899069,1.16386819786103,4.58931858795801,1.35588444468319,1.91858694505451,2.78200456384186,0.823040347426423,3.12882212375685,1.52301758477914,0.426905989478705,1.39866726707491,1.87317542300338,6.41404938529128,4.11827994868715,5.33002752556154,2.60930324687408,8.24929121158784,1.63085047288337,3.03348254305766,2.54995544090804,2.60055530911367,0.600420288709789,0.273810757783986,26.8267834940642,1.71906176567983,3.15464825135177,0.558564802544508,0.458320848023367,1.43574604915363,1.59743200399193,0.429226048136571,0.223171457441873,0.671834724867263,0.360299883542404,17.4743924291181,4.25429184459008,4.61528806934532,5.66189768375153,2.06697711180972,2.96356662230246,0,0.681017030557878,9.00217631404107,10.8656154911815,7.89336642255452,2.0247650239635,1.5476039091159,0.91124334987037,1.0063040627978,1.73372556058236,2.36045646607491,2.21760706690754,0.896436696664224,4.41404953834724,0.714695326373367,0.662091970365432,5.33963929074975,0,0,0,7.18381149374925,0.492555124496034,0.511164065356265,3.17273856256352,0.439656701034247,0,0.646414781807753,0.52893040697076,1.71086837884329,2.81926008926669,0.747511887973863,2.04365596629566,0,0.992332043623902,1.38328142328561,10.8395412558997,7.021753835472,0,0,0,0.327872630709804,2.19875734750328,1.77213635993397,1.70836770862748,1.251909307065,0,0.221858103073705,0.807253238237985,3.32036723846954,3.8743926468253,0.454947352624943,1.14186133417987,0.470531639396343,6.55668868129634,1.59413131471908,1.49254802886874,0.467426619694449,1.10961172300523,0.189403005275089,0.251567901752575,0,0.228840068396924,0.453692771289717,1.70980920641059,2.66139269981341,2.07085797312813,0.449803112163605,1.24210365501008,1.24411862352257,0.797525143673985,0,0.751288044986092,1.14241563650639,2.84809513243263,0.545545977607678,0.214821114084977,0.928067519756987,0,2.40016658797892,0.343395705182793,0,1.26184898228651,1.92619830407303,2.78774068787403,0.260994291965212,0.453411851024545,0.463044948647668,1.71315693154527,0.537266523244462,1.54400723580486,0.877136198314828,3.18040462702586,1.15748422962549,1.18259708457151,1.28120759293973,0.345430341731199,1.51929978088691,0.829550616910385,1.36402216187572,0.797189041880179,1.14495775979091,0.982829546539238,1.2288645437686,2.74705760366215,3.39978572953381,3.52082707990665,1.37771983728653,6.2426754892352,0.552317850755522,0.139879507719444,0,1.79052119825112,3.66604358748718,0.786329709279482,4.14996625129653,1.01839517972415,7.22754728345722,1.85903646388503,5.58644917973244,0.636008701306837,5.59918389508899,2.40171224485641,0.705351887381368,0.3062454773532,0.834979926253974,0,0.319267718114302,0.82046545696302,3.27693205088234,1.03735878696327,0.968853873791107,1.42769420259154,1.57036349601641,3.42112197708447,3.4851433719119,2.31051332300676,1.1441462864015,10.3553988909015,2.98374333174412,1.72983755203292,1.0085253435176,0,5.76194727859129,0.163771917510097,1.92212912082159,0.675375846183947,1.56215619722769,0.620060389503552,0.760989722326882,2.7348740450911,0.548257766857182,0.992422356778588,1.05522746615772,2.29972369751271,0,0,3.03482802118316,2.50428410486427,1.33053555243958,4.83982747734273,0.685952037749674,0.40781839786099,0.657727735628491,6.02788588508238,3.55940486054621,1.0989032999072,0.314231179832004,3.64353812307926,2.73947616152849,3.0229862770607,0.9555033757741,1.07214816264985,5.05643557544725,6.39327839524689,5.38960644137996,0.801711364730253,1.86494547746733,1.87790324803345,2.76503864725637,1.29068207646083,2.24830801388074,2.04512171421978,0.423387050190929,3.2074961596167,0.31020638566432,0,2.79638579494481,2.65005630761156,1.95068679971631,0.647428837187895,0.205325613712494,1.1598144313382,0.971421986118279,2.33939463462106,3.780064728066,6.65952508354384,3.16249029709088,3.62803705259916,3.77407108916684,1.00326405540328,0.874238242015829,2.82190377816914,0.735444965261716,1.17838273550813,0.588925401344836,0,0.8453114551668,1.86919826156599,2.72553362141575,2.64277340691666,6.29629282327052,2.49975514047921,0.352894871715692,3.45037876763424,2.19100916473955,1.83491713361816,0,6.94194873650012,0.203974470572744,2.61810414204226,1.5870805215462,0.743990036333503,0.462175628631418,0.432626562123789,6.93915336592934,7.10226217764021,3.80095503034311,6.83325159271278,13.8953050738091,12.4058114372041,8.022641257356,3.71315621269373,6.69910325390446,0,0.413731983447581,1.70587185520785,3.57096647195611,4.52122368852043,4.22108057211834,0.897054900644907,0.318235791390825,1.21270313374932,2.61260097476354,1.02669990325584,4.3105313929336,1.14755528628282,1.66330178273007,2.84911440138411,3.84218445159776,3.8614456457388,0.808426818959282,0,1.95586310692586,1.22068853494722,0,2.21401172950129,2.24397944612263 | |||
|short_description=p2@HELLS | |||
}} |
Revision as of 04:15, 11 January 2014
Short description: | p2@HELLS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HELLS_5end |
Coexpression cluster: | C3061_granulocyte_testicular_hepatoblastoma_HES3GFP_retinoblastoma_H9_Hodgkin |
Association with transcript: | -11bp_to_uc001kjs.2_5end |
EntrezGene: | HELLS |
HGNC: | 4861 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.77e-15 | 53 |
common lymphoid progenitor | 7.77e-15 | 53 |
lymphoid lineage restricted progenitor cell | 2.69e-14 | 52 |
lymphocyte of B lineage | 7.87e-11 | 24 |
pro-B cell | 7.87e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.78e-34 | 235 |
disease of cellular proliferation | 1.01e-32 | 239 |
cell type cancer | 2.09e-24 | 143 |
carcinoma | 3.23e-22 | 106 |
organ system cancer | 2.44e-17 | 137 |
hematologic cancer | 1.40e-10 | 51 |
immune system cancer | 1.40e-10 | 51 |
leukemia | 1.82e-07 | 39 |