FFCP PHASE1:Hg19::chr11:46403574..46403593,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4192 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6972 | |||
|TSSclassifier=strong | |||
|UniProt=P21741 | |||
|association_with_transcript=271bp_to_ENST00000407067,uc001ncs.2_5end | |||
|description=CAGE_peak_5_at_MDK_5end | |||
|id=chr11:46403574..46403593,+ | |||
|ontology_enrichment_celltype=CL:0002321!5.94e-23!248;CL:0000220!4.67e-22!246;CL:0000222!1.14e-20!119;CL:0000066!1.19e-17!254;CL:0000183!1.94e-13!59;CL:0000055!6.54e-13!180;CL:0000393!1.38e-12!60;CL:0000211!1.38e-12!60;CL:0002078!2.39e-11!44;CL:0000187!2.75e-11!54;CL:0000115!3.09e-11!35;CL:0002139!1.52e-10!24;CL:0000213!1.54e-10!57;CL:0000215!1.54e-10!57;CL:0000680!2.35e-10!57;CL:0000056!2.35e-10!57;CL:0000355!2.35e-10!57;CL:0000192!2.04e-09!42;CL:0000514!2.04e-09!42;CL:1000449!9.10e-08!16;CL:0000071!1.04e-07!18;CL:0002546!1.04e-07!18;CL:1000497!1.27e-07!18;CL:0002518!1.27e-07!18;CL:0000359!5.77e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.60e-11;24!CL:0000115;1.56e-10;36!CL:0002078;8.44e-09;45!CL:0000071;3.99e-08;18!CL:1000449;6.02e-08;15!CL:0000213;1.25e-07;58!CL:0000215;1.25e-07;58!CL:0000192;1.38e-07;43!CL:1000497;1.59e-07;17!CL:0002518;1.59e-07;17!CL:0000393;2.44e-07;61!CL:0000211;2.44e-07;61!CL:0000359;5.26e-07;32!CL:0000187;6.61e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.50e-23,250;CL:0000222,9.85e-23,121;CL:0000066,4.22e-17,253;CL:0000393,1.15e-13,61;CL:0000211,1.15e-13,61;CL:0000115,1.00e-12,36;CL:0002078,1.02e-12,45;CL:0000213,1.94e-12,58;CL:0000215,1.94e-12,58;CL:0000187,2.86e-12,55;CL:0002139,3.58e-11,24;CL:0000680,1.41e-10,58;CL:0000056,1.41e-10,58;CL:0000355,1.41e-10,58;CL:0000192,2.88e-10,43;CL:0000514,2.88e-10,43;CL:0000071,3.86e-08,18;CL:0002546,3.86e-08,18;CL:1000449,6.52e-08,15;CL:1000497,1.72e-07,17;CL:0002518,1.72e-07,17;CL:0000359,2.40e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002546;3.99e-08;18!CL:0000222;1.11e-07;121!CL:0000514;1.38e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.07e-18!118;UBERON:0000490!2.23e-18!138;UBERON:0000119!7.24e-18!312;UBERON:0000483!1.76e-17!309;UBERON:0002049!2.35e-17!79;UBERON:0007798!2.35e-17!79;UBERON:0005256!4.05e-15!143;UBERON:0000481!1.08e-13!347;UBERON:0000055!1.59e-13!69;UBERON:0000477!2.95e-12!286;UBERON:0004111!4.13e-12!241;UBERON:0004872!9.36e-12!84;UBERON:0001981!1.43e-11!60;UBERON:0007500!1.43e-11!60;UBERON:0004537!1.43e-11!60;UBERON:0006965!1.43e-11!60;UBERON:0004535!4.39e-11!110;UBERON:0000468!7.17e-11!659;UBERON:0003104!8.93e-11!238;UBERON:0009142!8.93e-11!238;UBERON:0001009!3.46e-10!113;UBERON:0002100!4.96e-10!216;UBERON:0000025!7.63e-10!194;UBERON:0002385!1.45e-09!63;UBERON:0001015!1.45e-09!63;UBERON:0000383!1.45e-09!63;UBERON:0001134!1.56e-09!61;UBERON:0002036!1.56e-09!61;UBERON:0003082!1.56e-09!61;UBERON:0000475!1.96e-09!365;UBERON:0000922!3.34e-09!612;UBERON:0000486!1.82e-08!82;UBERON:0001637!3.08e-08!42;UBERON:0003509!3.08e-08!42;UBERON:0004572!3.08e-08!42;UBERON:0000467!6.69e-08!625;UBERON:0000480!7.01e-08!626;UBERON:0006554!7.66e-08!44;UBERON:0004290!7.95e-08!70;UBERON:0000914!7.99e-08!83;UBERON:0002329!7.99e-08!83;UBERON:0003077!7.99e-08!83;UBERON:0003059!7.99e-08!83;UBERON:0007282!7.99e-08!83;UBERON:0009618!7.99e-08!83;UBERON:0007285!7.99e-08!83;UBERON:0004211!9.10e-08!16;UBERON:0001285!9.10e-08!16;UBERON:0007684!9.10e-08!16;UBERON:0003220!9.10e-08!16;UBERON:0004208!9.10e-08!16;UBERON:0001986!1.04e-07!18;UBERON:0004638!1.04e-07!18;UBERON:0004852!1.04e-07!18;UBERON:0007625!1.37e-07!11;UBERON:0001008!1.43e-07!45;UBERON:0006555!1.54e-07!17;UBERON:0005103!1.54e-07!17;UBERON:0000083!1.54e-07!17;UBERON:0009201!1.54e-07!17;UBERON:0004819!1.54e-07!17;UBERON:0006553!1.54e-07!17;UBERON:0003074!1.54e-07!17;UBERON:0003060!1.54e-07!17;UBERON:0000080!1.60e-07!18;UBERON:0002120!1.60e-07!18;UBERON:0004875!1.60e-07!18;UBERON:0005721!1.60e-07!18;UBERON:0005754!1.60e-07!18;UBERON:0007297!1.60e-07!18;UBERON:0002050!1.87e-07!605;UBERON:0005423!1.87e-07!605;UBERON:0000923!3.11e-07!604;UBERON:0005291!3.11e-07!604;UBERON:0006598!3.11e-07!604;UBERON:0002532!3.11e-07!604;UBERON:0006914!3.32e-07!25;UBERON:0001456!4.42e-07!21;UBERON:0004573!6.44e-07!33;UBERON:0004571!6.44e-07!33;UBERON:0000466!8.92e-07!126;UBERON:0005156!9.06e-07!59;UBERON:0000990!9.06e-07!59;UBERON:0000970!9.96e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.63e-09;74!UBERON:0002049;9.80e-09;75!UBERON:0007798;9.80e-09;75!UBERON:0004638;3.99e-08;18!UBERON:0001986;3.99e-08;18!UBERON:0004852;3.99e-08;18!UBERON:0000055;4.30e-08;65!UBERON:0007500;4.86e-08;56!UBERON:0001981;4.86e-08;56!UBERON:0004537;4.86e-08;56!UBERON:0007625;5.56e-08;11!UBERON:0006555;6.02e-08;15!UBERON:0004819;6.02e-08;15!UBERON:0001285;6.02e-08;15!UBERON:0007684;6.02e-08;15!UBERON:0006914;6.80e-08;25!UBERON:0001456;9.33e-08;21!UBERON:0000970;2.28e-07;20!UBERON:0000487;2.37e-07;22!UBERON:0000019;3.91e-07;19!UBERON:0000047;3.91e-07;19!UBERON:0004088;3.91e-07;19!UBERON:0010230;3.91e-07;19!UBERON:0000490;5.29e-07;33!UBERON:0001637;9.08e-07;42!UBERON:0003509;9.08e-07;42!UBERON:0004572;9.08e-07;42!UBERON:0004573;9.76e-07;33!UBERON:0004571;9.76e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.83e-19,117;UBERON:0002049,7.96e-18,78;UBERON:0007798,7.96e-18,78;UBERON:0000490,5.10e-17,148;UBERON:0003104,3.42e-16,160;UBERON:0009142,3.42e-16,160;UBERON:0000119,1.52e-14,309;UBERON:0000483,3.53e-14,306;UBERON:0000055,1.95e-13,68;UBERON:0005256,6.98e-13,122;UBERON:0004535,3.77e-12,109;UBERON:0004872,5.20e-12,83;UBERON:0007500,5.48e-12,59;UBERON:0001981,5.48e-12,59;UBERON:0004537,5.48e-12,59;UBERON:0006965,5.48e-12,59;UBERON:0001009,2.48e-11,112;UBERON:0007503,2.54e-10,78;UBERON:0001134,9.62e-10,62;UBERON:0002036,9.62e-10,62;UBERON:0003082,9.62e-10,62;UBERON:0002385,1.65e-09,64;UBERON:0001015,1.65e-09,64;UBERON:0000383,1.65e-09,64;UBERON:0004111,2.72e-09,240;UBERON:0002100,4.65e-09,199;UBERON:0001637,1.91e-08,42;UBERON:0003509,1.91e-08,42;UBERON:0004572,1.91e-08,42;UBERON:0006554,2.21e-08,47;UBERON:0004638,3.86e-08,18;UBERON:0001986,3.86e-08,18;UBERON:0004852,3.86e-08,18;UBERON:0000486,3.86e-08,83;UBERON:0007625,5.17e-08,11;UBERON:0004211,6.52e-08,15;UBERON:0009773,6.52e-08,15;UBERON:0001231,6.52e-08,15;UBERON:0001285,6.52e-08,15;UBERON:0007684,6.52e-08,15;UBERON:0004208,6.52e-08,15;UBERON:0001008,6.82e-08,48;UBERON:0006914,7.08e-08,25;UBERON:0007524,9.68e-08,73;UBERON:0002329,1.04e-07,71;UBERON:0003059,1.04e-07,71;UBERON:0007282,1.04e-07,71;UBERON:0004290,1.04e-07,71;UBERON:0009618,1.04e-07,71;UBERON:0000025,1.07e-07,192;UBERON:0006555,1.16e-07,16;UBERON:0004819,1.16e-07,16;UBERON:0000487,2.37e-07,22;UBERON:0003077,2.39e-07,72;UBERON:0007285,2.39e-07,72;UBERON:0004573,4.97e-07,33;UBERON:0004571,4.97e-07,33;UBERON:0001456,5.25e-07,22;UBERON:0000922,6.83e-07,592 | |||
|phase1_expression=0,0,0.563817616383885,0,0.446961094427288,0.872338524100369,0,1.26343974685366,0.783556884599516,9.09215565055583,11.1648186875588,7.64544802455603,12.1332809985089,7.05468211872266,5.63375538737457,10.7572023432284,13.8619741445515,13.1455816269727,14.1500511649247,27.4559959511237,15.0960511520747,21.9418305034661,12.0219114595044,9.03371205481036,9.0390700508258,0,0,0,0.393364276848904,0,0,1.83884244895785,0.30120591877825,0.739508020333575,0,0,3.52320527201817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,1.12101712596307,1.05353633910031,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0664806419773,14.75541891348,8.82251676720359,2.1686349143074,3.00802746381534,2.60723734129483,1.5905718941022,1.94653948121054,28.2659103320563,28.8248216701333,22.9248790659059,1.63723844372141,3.64295288292542,1.48313777113772,0.324547393654683,0,0,0,0,0,7.9504962946682,4.30117297553062,8.67851254018986,13.0020826642522,12.5849830862972,15.9568464325239,7.52381879532518,8.52775305258785,21.3459757612026,10.3763389957048,25.7810762949854,16.7259863258073,31.9721295388102,5.8826092855339,28.3549681758616,8.03697554556718,12.1245861218132,6.64407734851601,15.3316637465883,11.3911879148175,11.7249116115461,0,0,5.66922267785295,0,2.5326102332916,1.85372853138506,11.1866282092037,2.83734705758686,3.92474320099615,6.4049397437823,1.72667283892012,3.42332138939743,3.90660949002095,1.30769522490767,6.20565453344219,5.18558332031999,7.49828581868149,0.936480230490962,2.85235910772225,1.04614076386261,1.87895197830024,0.971237666208789,1.68540968042698,0.408308342509787,3.68502951935304,0.309977343527296,10.6920257155385,7.66527480763526,0.910161361938026,2.15585442544872,2.02003336744879,2.00189631795143,0.831192346452549,4.38977620880838,0.612975591598039,4.6573798261045,3.06266894532057,2.15267562826634,6.19316427573846,4.66250182551036,4.50136644126603,4.84346887420663,2.83404594050192,3.53622027030021,3.20675031258406,3.31285817548075,3.28163906517349,9.02089006694534,9.21382523867228,6.39017266529906,5.94437379543078,2.37384829234683,0.193260853163297,0.818238361772504,1.14721838155602,21.5893459849384,21.0722331631162,26.7246068599892,16.1711245823978,36.0818816752149,21.8986415445498,0,1.92972281457866,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,16.9775754563669,19.6338483324824,13.5819423739362,29.4017422771084,0,0,0,0,6.27241036569879,23.6763578211965,0.878002283269004,0,0.904760751704678,2.96283024507295,8.47101593806844,0,18.7630744632855,60.0519497770898,23.1295127644569,24.6866625671436,29.1680872923265,19.5961776801636,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,1.51183915378974,1.70130116690864,0.268675568108545,0,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,1.71072446022705,0.102827492703324,0,1.14330573052231,4.48524337381443,13.5147621338317,1.0267360014933,16.9345947642689,10.7296933755565,0.845302752556,7.97814349754611,10.4007436911366,9.51667284769926,7.09245660116391,6.39413229638638,5.00422977803516,49.9211876960128,7.40916303102692,2.60588947434988,6.39705507736582,3.95975936466715,11.7561357053239,42.7051394714144,5.69846049737725,0,0,0,0.958499421966331,8.04033550838797,1.42636905040718,0.434343920002738,0.821905290201534,0.716243852959582,0,0,0,0,14.229298956458,7.8083912314573,3.09315525111078,3.35032530668698,3.82763250991898,0,0,0,17.6675748075561,19.0064798002677,14.377046256086,1.24782516918484,0.535286966391485,0.630809660135739,0.234282829985426,2.70851489754947,20.4666753650386,5.17365356462525,7.97070718242524,7.00602840458472,5.99496939829772,20.5591215335878,12.3531632571908,0,0,0,3.94065842880137,21.6366071363646,27.5175166930009,0.248107807818777,0.153461973288062,0,0.256278298511402,0.511707249066704,0,1.48418066444991,1.23367755042124,2.30830242907065,1.72467027628999,8.30807086693794,2.32420756919918,8.58102092100518,5.61418116849198,2.76242966807689,4.59257792658427,8.19410256030227,15.6038053801715,17.5967849033891,9.85796314936509,40.7861879971965,18.9980992049239,16.4660541072886,26.1586783363062,10.885997137697,9.71621622459627,69.4022637106302,18.424357752982,39.6334921345334,4.07802036872061,2.49322802678617,18.3577298872186,0,0,22.0547107600095,33.7855085070697,20.1734604691868,0.412164046590889,1.28197250745681,1.65018999841176,4.59412430396938,1.95018073810956,0,9.6670718292122,4.00526404498075,2.76306614507033,2.06754858726796,7.84167787538397,6.38073453222605,3.92042486114064,11.1290044558422,1.81813406897076,0.768760269460425,1.40373983744043,2.023155617111,1.39453664789186,18.2591161161771,2.0911118104818,24.334652833911,4.25844824253617,4.34966496037536,6.11569923042936,1.00187420719394,5.58237554039501,5.69482964493707,4.38449446024797,16.121560852614,8.98671874871233,4.77304871888905,4.70969184119538,8.27413304883248,7.9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| |||
|short_description=p5@MDK | |||
}} |
Revision as of 07:32, 11 January 2014
Short description: | p5@MDK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MDK_5end |
Coexpression cluster: | NA |
Association with transcript: | 271bp_to_ENST00000407067, uc001ncs.2_5end |
EntrezGene: | MDK |
HGNC: | 6972 |
UniProt: | P21741 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.50e-23 | 250 |
mesodermal cell | 9.85e-23 | 121 |
epithelial cell | 4.22e-17 | 253 |
electrically responsive cell | 1.15e-13 | 61 |
electrically active cell | 1.15e-13 | 61 |
endothelial cell | 1.00e-12 | 36 |
meso-epithelial cell | 1.02e-12 | 45 |
lining cell | 1.94e-12 | 58 |
barrier cell | 1.94e-12 | 58 |
muscle cell | 2.86e-12 | 55 |
endothelial cell of vascular tree | 3.58e-11 | 24 |
muscle precursor cell | 1.41e-10 | 58 |
myoblast | 1.41e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.41e-10 | 58 |
smooth muscle cell | 2.88e-10 | 43 |
smooth muscle myoblast | 2.88e-10 | 43 |
blood vessel endothelial cell | 3.86e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.86e-08 | 18 |
epithelial cell of nephron | 6.52e-08 | 15 |
kidney cell | 1.72e-07 | 17 |
kidney epithelial cell | 1.72e-07 | 17 |
vascular associated smooth muscle cell | 2.40e-07 | 32 |