FFCP PHASE1:Hg19::chr11:62473706..62473775,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26580 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15832 | |||
|TSSclassifier=strong | |||
|UniProt=Q96G97 | |||
|association_with_transcript=0bp_to_ENST00000403550,ENST00000530900,uc001nuo.1_5end | |||
|description=CAGE_peak_1_at_BSCL2_5end | |||
|id=chr11:62473706..62473775,- | |||
|ontology_enrichment_celltype=CL:0000055!3.19e-18!180;CL:0000222!9.63e-14!119;CL:0000548!1.63e-12!679;CL:0000004!1.63e-12!679;CL:0000255!1.63e-12!679;CL:0000220!2.56e-12!246;CL:0000066!3.10e-12!254;CL:0002321!5.28e-12!248;CL:0000012!5.66e-12!682;CL:0000183!1.57e-11!59;CL:0000192!4.33e-11!42;CL:0000514!4.33e-11!42;CL:0000680!4.35e-10!57;CL:0000056!4.35e-10!57;CL:0000355!4.35e-10!57;CL:0000187!9.60e-10!54;CL:0000359!2.50e-09!32;CL:0000393!2.36e-07!60;CL:0000211!2.36e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.44e-09;32!CL:0000192;2.85e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.81e-14,121;CL:0000066,3.03e-12,253;CL:0002321,4.57e-12,250;CL:0000192,6.57e-11,43;CL:0000514,6.57e-11,43;CL:0000680,5.64e-10,58;CL:0000056,5.64e-10,58;CL:0000355,5.64e-10,58;CL:0000187,1.25e-09,55;CL:0000359,2.50e-09,32;CL:0000393,2.77e-07,61;CL:0000211,2.77e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.85e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.01e-16!216;UBERON:0003104!1.63e-16!238;UBERON:0009142!1.63e-16!238;UBERON:0009569!1.62e-12!113;UBERON:0005256!2.12e-11!143;UBERON:0000926!3.70e-10!448;UBERON:0004120!3.70e-10!448;UBERON:0006603!3.70e-10!448;UBERON:0004290!1.85e-09!70;UBERON:0000914!1.96e-09!83;UBERON:0002329!1.96e-09!83;UBERON:0003077!1.96e-09!83;UBERON:0003059!1.96e-09!83;UBERON:0007282!1.96e-09!83;UBERON:0009618!1.96e-09!83;UBERON:0007285!1.96e-09!83;UBERON:0000464!2.06e-09!104;UBERON:0000915!2.74e-09!52;UBERON:0000486!5.12e-09!82;UBERON:0001134!1.52e-08!61;UBERON:0002036!1.52e-08!61;UBERON:0003082!1.52e-08!61;UBERON:0008947!2.78e-08!38;UBERON:0003258!2.78e-08!38;UBERON:0001637!3.41e-08!42;UBERON:0003509!3.41e-08!42;UBERON:0004572!3.41e-08!42;UBERON:0000466!3.68e-08!126;UBERON:0002049!4.57e-08!79;UBERON:0007798!4.57e-08!79;UBERON:0002385!5.69e-08!63;UBERON:0001015!5.69e-08!63;UBERON:0000383!5.69e-08!63;UBERON:0000475!9.19e-08!365;UBERON:0000481!2.46e-07!347;UBERON:0000055!3.36e-07!69;UBERON:0003914!4.46e-07!118;UBERON:0000490!5.31e-07!138;UBERON:0004573!8.10e-07!33;UBERON:0004571!8.10e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;2.16e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,7.48e-17,199;UBERON:0009569,3.57e-12,112;UBERON:0003104,8.02e-12,160;UBERON:0009142,8.02e-12,160;UBERON:0007503,4.47e-11,78;UBERON:0005256,8.55e-10,122;UBERON:0002329,2.23e-09,71;UBERON:0003059,2.23e-09,71;UBERON:0007282,2.23e-09,71;UBERON:0004290,2.23e-09,71;UBERON:0009618,2.23e-09,71;UBERON:0007524,2.52e-09,73;UBERON:0000486,5.91e-09,83;UBERON:0003077,6.45e-09,72;UBERON:0007285,6.45e-09,72;UBERON:0000915,8.28e-09,52;UBERON:0001134,1.84e-08,62;UBERON:0002036,1.84e-08,62;UBERON:0003082,1.84e-08,62;UBERON:0008947,2.79e-08,38;UBERON:0003258,2.79e-08,38;UBERON:0001637,3.41e-08,42;UBERON:0003509,3.41e-08,42;UBERON:0004572,3.41e-08,42;UBERON:0002049,4.92e-08,78;UBERON:0007798,4.92e-08,78;UBERON:0002385,6.73e-08,64;UBERON:0001015,6.73e-08,64;UBERON:0000383,6.73e-08,64;UBERON:0000490,7.47e-08,148;UBERON:0000055,3.60e-07,68;UBERON:0003914,4.20e-07,117;UBERON:0004573,8.10e-07,33;UBERON:0004571,8.10e-07,33 | |||
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| |||
|short_description=p1@BSCL2 | |||
}} |
Revision as of 08:11, 11 January 2014
Short description: | p1@BSCL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BSCL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000403550, ENST00000530900, uc001nuo.1_5end |
EntrezGene: | BSCL2 |
HGNC: | 15832 |
UniProt: | Q96G97 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.81e-14 | 121 |
epithelial cell | 3.03e-12 | 253 |
embryonic cell | 4.57e-12 | 250 |
smooth muscle cell | 6.57e-11 | 43 |
smooth muscle myoblast | 6.57e-11 | 43 |
muscle precursor cell | 5.64e-10 | 58 |
myoblast | 5.64e-10 | 58 |
multi-potent skeletal muscle stem cell | 5.64e-10 | 58 |
muscle cell | 1.25e-09 | 55 |
vascular associated smooth muscle cell | 2.50e-09 | 32 |
electrically responsive cell | 2.77e-07 | 61 |
electrically active cell | 2.77e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
trunk | 7.48e-17 | 199 |
subdivision of trunk | 3.57e-12 | 112 |
mesenchyme | 8.02e-12 | 160 |
entire embryonic mesenchyme | 8.02e-12 | 160 |
epithelial vesicle | 4.47e-11 | 78 |
trunk mesenchyme | 8.55e-10 | 122 |
somite | 2.23e-09 | 71 |
presomitic mesoderm | 2.23e-09 | 71 |
presumptive segmental plate | 2.23e-09 | 71 |
dermomyotome | 2.23e-09 | 71 |
trunk paraxial mesoderm | 2.23e-09 | 71 |
dense mesenchyme tissue | 2.52e-09 | 73 |
multilaminar epithelium | 5.91e-09 | 83 |
paraxial mesoderm | 6.45e-09 | 72 |
presumptive paraxial mesoderm | 6.45e-09 | 72 |
thoracic segment of trunk | 8.28e-09 | 52 |
skeletal muscle tissue | 1.84e-08 | 62 |
striated muscle tissue | 1.84e-08 | 62 |
myotome | 1.84e-08 | 62 |
respiratory primordium | 2.79e-08 | 38 |
endoderm of foregut | 2.79e-08 | 38 |
artery | 3.41e-08 | 42 |
arterial blood vessel | 3.41e-08 | 42 |
arterial system | 3.41e-08 | 42 |
vasculature | 4.92e-08 | 78 |
vascular system | 4.92e-08 | 78 |
muscle tissue | 6.73e-08 | 64 |
musculature | 6.73e-08 | 64 |
musculature of body | 6.73e-08 | 64 |
unilaminar epithelium | 7.47e-08 | 148 |
vessel | 3.60e-07 | 68 |
epithelial tube | 4.20e-07 | 117 |
systemic artery | 8.10e-07 | 33 |
systemic arterial system | 8.10e-07 | 33 |