FFCP PHASE1:Hg19::chr11:119982702..119982714,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1613 | |||
|description=CAGE_peak_at_chr11:119982702..119982714,- | |||
|id=chr11:119982702..119982714,- | |||
|ontology_enrichment_celltype=CL:0002076!5.38e-15!43;CL:0000066!3.26e-14!254;CL:0002251!3.16e-11!21;CL:0000223!2.05e-09!59;CL:0000349!9.15e-08!3;CL:0002577!9.15e-08!3;CL:0002159!3.31e-07!13;CL:0000622!3.33e-07!5;CL:0002541!3.50e-07!3;CL:0002623!4.97e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002577;7.81e-19;3!CL:0000349;1.12e-14;19!CL:0000575;1.73e-12;2!CL:0000622;3.20e-11;5!CL:0002159;3.22e-10;14!CL:0000154;1.97e-09;6!CL:0002231;3.27e-09;3!CL:0002623;6.08e-09;3!CL:0002541;7.71e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,9.67e-19,3;CL:0000349,1.24e-14,19;CL:0000575,2.62e-12,2;CL:0000622,2.55e-11,5;CL:0002159,3.26e-10,14;CL:0000154,1.63e-09,6;CL:0002231,3.77e-09,3;CL:0002623,6.59e-09,3;CL:0002541,8.03e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.72e-09;29!UBERON:0009143;1.12e-07;1!UBERON:0000358;2.03e-07;1!UBERON:0004874;4.46e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;4.46e-07;1!DOID:3149;4.46e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,4.89e-07,1;DOID:3149,4.89e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.35e-26!72;UBERON:0001557!4.68e-19!19;UBERON:0001737!1.01e-18!9;UBERON:0004119!2.19e-18!169;UBERON:0000925!2.19e-18!169;UBERON:0006595!2.19e-18!169;UBERON:0000065!1.64e-17!53;UBERON:0005631!2.04e-16!14;UBERON:0000158!2.04e-16!14;UBERON:0003124!1.06e-14!7;UBERON:0000161!2.56e-14!35;UBERON:0000166!1.47e-13!21;UBERON:0000077!2.08e-13!130;UBERON:0000072!4.99e-13!46;UBERON:0001007!2.38e-12!155;UBERON:0001555!2.38e-12!155;UBERON:0007026!2.38e-12!155;UBERON:0008947!1.18e-11!38;UBERON:0003258!1.18e-11!38;UBERON:0000165!5.36e-11!28;UBERON:0000930!5.36e-11!28;UBERON:0000478!2.86e-10!24;UBERON:0000064!7.26e-10!219;UBERON:0001041!8.24e-10!98;UBERON:0004921!8.64e-10!129;UBERON:0004185!8.64e-10!129;UBERON:0001987!3.47e-09!4;UBERON:0004340!3.47e-09!4;UBERON:0003102!7.99e-08!95;UBERON:0000476!3.50e-07!3;UBERON:0000920!3.50e-07!3;UBERON:0004923!4.87e-07!57;UBERON:0001444!5.26e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.22e-23;9!UBERON:0001557;5.22e-23;9!UBERON:0000478;6.94e-15;24!UBERON:0001987;2.90e-14;4!UBERON:0005631;8.82e-10;10!UBERON:0000158;8.82e-10;10!UBERON:0001723;4.88e-09;3!UBERON:0001033;4.88e-09;3!UBERON:0003124;7.71e-09;3!UBERON:0000920;7.71e-09;3!UBERON:0007029;1.05e-07;1!UBERON:0000989;4.46e-07;1!UBERON:0008811;4.46e-07;1!UBERON:0000014;5.77e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.15e-23,9;UBERON:0003124,3.23e-21,7;UBERON:0005631,3.64e-20,14;UBERON:0000158,3.64e-20,14;UBERON:0001557,7.36e-19,19;UBERON:0000478,7.65e-15,24;UBERON:0001987,3.40e-14,4;UBERON:0004340,3.40e-14,4;UBERON:0001723,4.25e-09,3;UBERON:0001033,4.25e-09,3;UBERON:0010056,4.25e-09,3;UBERON:0000920,8.03e-09,3;UBERON:0000072,1.06e-08,47;UBERON:0007029,1.06e-07,1;UBERON:0001004,1.30e-07,74;UBERON:0003102,1.49e-07,99;UBERON:0001041,1.67e-07,87;UBERON:0000065,2.19e-07,54;UBERON:0004119,3.75e-07,160;UBERON:0000925,3.75e-07,160;UBERON:0006595,3.75e-07,160;UBERON:0000989,4.08e-07,1;UBERON:0008811,4.08e-07,1;UBERON:0006258,4.08e-07,1;UBERON:0005876,4.08e-07,1;UBERON:0004874,4.08e-07,1;UBERON:0004921,5.61e-07,118;UBERON:0000014,6.03e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0,0.739508020333575,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,1.45718115317017,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,2.36018566109342,0.723033089650446,1.8749975364507,1.52515610864684,0.474541238222193,1.07865046528132,1.76599318612811,3.46272441251751,0,0,0,0,0,0,0,0,0,0,2.96325770603289,0,1.20634766893957,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.850650583454319,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.63753085735511,3.32870879020994,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00506470303285,4.05156351317944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0,0.826424576804891,0.192190067365106,0,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,0.282431402330337,0,0,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11742430127209,0,2.14870036263921,0.296964680832639,2.45728561679386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,1.82069517256799,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,0.83654246567162,1.30815439456455,0,0,0,0,1.27600463892768,0.457987967009312,2.66517388009317,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.293977192243133,0,0.17472666824203,0,0.19351266257817,0.292357268344742,0.328461828212837,5.52837393983991,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34173875039706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.617602894321944,0.219284049578707,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0.490738592505128,0.353909170043221,0.733714394086716,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,1.48863353516788,0,0.511049710558381,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0,0,0,0.549451649953598,0,0,0,0,0,0,0,0,0,0,0.207216164163037,3.0729325876911,1.38251932362818,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,6.31424290976881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,1.91910583710883,0,0.452122368852043,0.186224142887574,0,0,0,7.40236942849669,1.71116650542641,0.471464371102113,0.860666464712116,0.665320713092027,0.244209805832924,0,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr11:119982702..119982714,- | |||
}} |
Revision as of 10:48, 11 January 2014
Short description: | p@chr11:119982702..119982714, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:119982702..119982714, - |
Coexpression cluster: | C1613_tongue_Sebocyte_esophagus_amniotic_throat_Prostate_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 9.67e-19 | 3 |
extraembryonic cell | 1.24e-14 | 19 |
corneal epithelial cell | 2.62e-12 | 2 |
acinar cell | 2.55e-11 | 5 |
general ecto-epithelial cell | 3.26e-10 | 14 |
protein secreting cell | 1.63e-09 | 6 |
epithelial cell of prostate | 3.77e-09 | 3 |
acinar cell of salivary gland | 6.59e-09 | 3 |
chorionic membrane mesenchymal stem cell | 8.03e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.15e-23 | 9 |
chorion | 3.23e-21 | 7 |
extraembryonic membrane | 3.64e-20 | 14 |
membranous layer | 3.64e-20 | 14 |
upper respiratory tract | 7.36e-19 | 19 |
extraembryonic structure | 7.65e-15 | 24 |
placenta | 3.40e-14 | 4 |
allantois | 3.40e-14 | 4 |
tongue | 4.25e-09 | 3 |
gustatory system | 4.25e-09 | 3 |
future tongue | 4.25e-09 | 3 |
egg chorion | 8.03e-09 | 3 |
segment of respiratory tract | 1.06e-08 | 47 |
surface | 1.06e-07 | 1 |
respiratory system | 1.30e-07 | 74 |
surface structure | 1.49e-07 | 99 |
foregut | 1.67e-07 | 87 |
respiratory tract | 2.19e-07 | 54 |
endoderm-derived structure | 3.75e-07 | 160 |
endoderm | 3.75e-07 | 160 |
presumptive endoderm | 3.75e-07 | 160 |
penis | 4.08e-07 | 1 |
intromittent organ | 4.08e-07 | 1 |
lateral plate mesenchyme | 4.08e-07 | 1 |
undifferentiated genital tubercle | 4.08e-07 | 1 |
somatopleure | 4.08e-07 | 1 |
subdivision of digestive tract | 5.61e-07 | 118 |
zone of skin | 6.03e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.89e-07 | 1 |
keratoacanthoma | 4.89e-07 | 1 |