FFCP PHASE1:Hg19::chr12:80084018..80084035,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5074 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8614 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-158bp_to_ENST00000551712_5end | |||
|coexpression_cluster_id=C428 | |||
|description=CAGE_peak_17_at_PAWR_5end | |||
|id=chr12:80084018..80084035,- | |||
|ontology_enrichment_celltype=CL:0002139!4.37e-20!24;CL:0000213!1.76e-18!57;CL:0000215!1.76e-18!57;CL:0000071!3.00e-15!18;CL:0002546!3.00e-15!18;CL:0000115!3.60e-15!35;CL:0002078!3.95e-13!44;CL:0000076!5.83e-12!62;CL:0000066!2.08e-11!254;CL:0000222!1.92e-08!119;CL:1000413!2.85e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.81e-106;24!CL:0000115;2.19e-79;36!CL:0000071;2.48e-76;18!CL:0002078;6.28e-52;45!CL:0000213;1.48e-41;58!CL:0000215;1.48e-41;58!CL:1000413;4.65e-34;9!CL:0002138;9.26e-31;6!CL:0002543;7.11e-30;6!CL:0002544;3.94e-21;6!CL:0002618;2.35e-16;3!CL:0002144;8.54e-16;3!CL:0000076;1.10e-15;63!CL:0002188;1.18e-15;5!CL:0002545;2.33e-11;2!CL:1000746;3.18e-11;7!CL:1000612;3.18e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.13e-106,24;CL:0000115,1.94e-95,36;CL:0002078,7.52e-81,45;CL:0000071,2.30e-76,18;CL:0002546,2.30e-76,18;CL:0000213,8.35e-71,58;CL:0000215,8.35e-71,58;CL:1000413,6.64e-34,9;CL:0005020,7.05e-31,6;CL:0002138,7.05e-31,6;CL:0005022,7.05e-31,6;CL:0000222,1.47e-30,121;CL:0002543,5.86e-30,6;CL:0000076,8.05e-27,63;CL:0002544,4.57e-21,6;CL:0002618,2.55e-16,3;CL:0002144,6.34e-16,3;CL:0002188,1.55e-15,5;CL:0000066,2.01e-14,253;CL:0002321,2.69e-12,250;CL:0002545,2.34e-11,2;CL:1000746,3.86e-11,7;CL:1000612,3.86e-11,7 | |||
|ontology_enrichment_development_v019=CL:0002546;2.48e-76;18!CL:0005022;9.26e-31;6!CL:0000222;2.30e-10;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:201;3.87e-08;6!DOID:0060100;3.87e-08;6!DOID:3371;9.90e-07;1!DOID:4549;9.90e-07;1!DOID:5861;9.90e-07;1!DOID:6496;9.90e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:201,4.07e-08,6;DOID:0060100,4.07e-08,6;DOID:3371,9.91e-07,1;DOID:4549,9.91e-07,1;DOID:5861,9.91e-07,1;DOID:6496,9.91e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!3.00e-15!18;UBERON:0004638!3.00e-15!18;UBERON:0004852!3.00e-15!18;UBERON:0000487!2.41e-13!22;UBERON:0006914!9.37e-12!25;UBERON:0002049!3.38e-09!79;UBERON:0007798!3.38e-09!79;UBERON:0000477!7.04e-09!286;UBERON:0000055!1.92e-08!69;UBERON:0003915!2.85e-08!9;UBERON:0004700!2.85e-08!9;UBERON:0001917!2.85e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.48e-76;18!UBERON:0001986;2.48e-76;18!UBERON:0004852;2.48e-76;18!UBERON:0000487;9.48e-62;22!UBERON:0006914;7.13e-54;25!UBERON:0000490;4.54e-40;33!UBERON:0003915;4.65e-34;9!UBERON:0004700;4.65e-34;9!UBERON:0001917;4.65e-34;9!UBERON:0001473;6.27e-23;8!UBERON:0004536;6.27e-23;8!UBERON:0006558;6.27e-23;8!UBERON:0000055;8.74e-20;65!UBERON:0001638;9.80e-20;9!UBERON:0003920;9.80e-20;9!UBERON:0004582;9.80e-20;9!UBERON:0002465;3.18e-18;10!UBERON:0010523;8.54e-16;3!UBERON:0001915;8.54e-16;3!UBERON:0001982;8.54e-16;3!UBERON:0007500;8.48e-15;56!UBERON:0001981;8.48e-15;56!UBERON:0004537;8.48e-15;56!UBERON:0002049;5.27e-14;75!UBERON:0007798;5.27e-14;75!UBERON:0003914;1.26e-11;74!UBERON:0005800;2.33e-11;2!UBERON:0001515;2.33e-11;2!UBERON:0000074;3.18e-11;7!UBERON:0001229;3.18e-11;7!UBERON:0002066;5.34e-10;5!UBERON:0000025;1.71e-08;93!UBERON:0004111;1.77e-08;130!UBERON:0002405;2.12e-08;27!UBERON:0001851;8.11e-08;15!UBERON:0004535;9.69e-08;109!UBERON:0001009;3.57e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.30e-76,18;UBERON:0001986,2.30e-76,18;UBERON:0004852,2.30e-76,18;UBERON:0000487,8.90e-62,22;UBERON:0006914,6.74e-54,25;UBERON:0000055,5.11e-34,68;UBERON:0003915,6.64e-34,9;UBERON:0004700,6.64e-34,9;UBERON:0001917,6.64e-34,9;UBERON:0002049,5.65e-29,78;UBERON:0007798,5.65e-29,78;UBERON:0001473,5.12e-23,8;UBERON:0004536,5.12e-23,8;UBERON:0006558,5.12e-23,8;UBERON:0007500,1.36e-20,59;UBERON:0001981,1.36e-20,59;UBERON:0004537,1.36e-20,59;UBERON:0006965,1.36e-20,59;UBERON:0001638,8.63e-20,9;UBERON:0003920,8.63e-20,9;UBERON:0004582,8.63e-20,9;UBERON:0004535,3.16e-19,109;UBERON:0001009,1.43e-18,112;UBERON:0002465,2.71e-18,10;UBERON:0010523,6.34e-16,3;UBERON:0001915,6.34e-16,3;UBERON:0001982,6.34e-16,3;UBERON:0003914,7.56e-14,117;UBERON:0004872,1.56e-13,83;UBERON:0005800,2.34e-11,2;UBERON:0001515,2.34e-11,2;UBERON:0010532,3.86e-11,7;UBERON:0000074,3.86e-11,7;UBERON:0001229,3.86e-11,7;UBERON:0001230,3.86e-11,7;UBERON:0003220,3.86e-11,7;UBERON:0005749,3.86e-11,7;UBERON:0004199,3.86e-11,7;UBERON:0004209,3.86e-11,7;UBERON:0004198,3.86e-11,7;UBERON:0004111,4.47e-11,240;UBERON:0002066,5.59e-10,5;UBERON:0005103,9.20e-10,8;UBERON:0000083,9.20e-10,8;UBERON:0009201,9.20e-10,8;UBERON:0006553,9.20e-10,8;UBERON:0003074,9.20e-10,8;UBERON:0003060,9.20e-10,8;UBERON:0000080,1.09e-08,9;UBERON:0002120,1.09e-08,9;UBERON:0004875,1.09e-08,9;UBERON:0005721,1.09e-08,9;UBERON:0005754,1.09e-08,9;UBERON:0007297,1.09e-08,9;UBERON:0001851,9.96e-08,15;UBERON:0000025,1.88e-07,192;UBERON:0004876,4.00e-07,11;UBERON:0000490,7.22e-07,148;UBERON:0003081,8.73e-07,203 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,0.246242116153576,0,0,0,0.410623275218653,0.251085279189606,0.382067028739756,0.492603536699674,0.629686250509434,0,0,0,0,0,0,0.154934401160603,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0.764546456250458,0,0,0.263384084775077,0,0,0,0,0,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0.795285947051099,0.486634870302636,0.189069634328136,0.221729397462564,0.527008714158756,0.327447688744282,0,0,0,0,0,0,0,0,2.18638648103376,0.860234595106124,2.08284300964557,2.82653970962005,1.25849830862972,1.92582629358047,1.04497483268405,4.65150166504792,4.98072767761394,6.35969164252873,1.61131726843659,2.28081631715554,7.80998584154142,4.04429388380456,2.43042584364528,4.55428614248807,3.14341121676638,3.71617885594963,1.53316637465883,3.79706263827252,1.46561395144326,0,0,0,0,0.379891534993739,0.529636723252875,0.286836620748814,0,0,0,0,0.311211035399766,0.404132016209064,0.326923806226917,0,0,0.234321431833797,0,0.570471821544449,0,0.117434498643765,0,0,0.204154171254893,0,0,0,0.494533858557114,0.910161361938026,0,0.168336113954066,0.250237039743928,0.277064115484183,0.438977620880838,0.612975591598039,0.300476117813194,0.226864366320042,0.179389635688862,0.427114777637135,0.211931901159562,0.300091096084402,0.412210116953756,0,0.930584281657949,0.168776332241266,0.292311015483596,0,0.368199594569197,0.161646056818812,0.355009592516614,0.201504196455281,0,0,0,0.573609190778008,0,0.132529768321485,0.464775771478074,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0.241011029883482,0.330881918197182,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0,0.514703430895577,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.231860809950154,1.05667824812239,3.60916119402685,2.31492756288305,2.66355813128438,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0,0.51336800074665,0.646358578788889,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0.239624855491583,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0.500170521059677,0,0.623912584592421,0.535286966391485,0.157702415033935,0,0,0,0,0.664225598535437,0.553107505625109,0,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.640695746278505,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0.184161977871793,0.229628896329213,0,0.131124414959424,0,0.308061348417659,0.784349769176855,0,0,2.27466768141793,1.19065593693561,1.0795795805107,1.54227252690289,0.541892875087706,0,0,0,0,0.219259876645935,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0,0,0.650060246036521,0,0,0,0.460511024178389,0,0.214840489736547,0,0.426133137080504,0.0890320356467374,0.330569830721956,0.384380134730212,0.382838137483752,0,0,0.31481234683064,0,0,0,0,0,0.429374660225974,0.372158369359667,0.632758849437452,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0.422215270595328,0,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0.18714054040822,0.73254089635947,0.36408156524854,0,0.568272293612826,0,0.296964680832639,0,0,0.140669416410513,0.111308705022906,0.494411622680279,0.211125408127993,0.19924798825107,0.552567831062295,0,0,0.123084805461069,0,0.359473404589307,0.179021174675609,0,0,0,1.11136990144637,0,0.0927680981618513,0,1.5625665665114,0.262379999988587,0.724999575434793,0,0,0,0,0.291604613383254,0.347249989866585,0,0.120596438625408,0,0,0,0,0.32681539055697,0.139423744278603,0.307801034015188,0.569710279235006,0.46112780877612,0.179515288819544,0,0.31900115973192,0.366390373607449,0,0,0,0,0,0,0,0,0,0.210998064528027,0.652931232636591,0,0,0,0.176915129006678,0,0.296521128680622,0.247127877893006,0.208843899010911,0.067401132980677,0,0.234264445725339,0.182454789215666,0.19566461893209,0.242780379534093,0.394584402849391,0,0,0.568679216656392,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0.174118413160805,0.698906672968121,0.343972064943233,0.290268993867255,0.0730893170861856,0.0821154570532092,0.193978032976839,14.12098027064,0.225980740780532,0.274083849293502,0.19871461170299,0.126621591911757,0,0.561111741760736,0.426905989478705,0.39961921916426,0,0.229073192331831,0.1715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| |||
|short_description=p17@PAWR | |||
}} |
Revision as of 14:53, 11 January 2014
Short description: | p17@PAWR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_PAWR_5end |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | -158bp_to_ENST00000551712_5end |
EntrezGene: | PAWR |
HGNC: | 8614 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.13e-106 | 24 |
endothelial cell | 1.94e-95 | 36 |
meso-epithelial cell | 7.52e-81 | 45 |
blood vessel endothelial cell | 2.30e-76 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.30e-76 | 18 |
lining cell | 8.35e-71 | 58 |
barrier cell | 8.35e-71 | 58 |
endothelial cell of artery | 6.64e-34 | 9 |
lymphangioblast | 7.05e-31 | 6 |
endothelial cell of lymphatic vessel | 7.05e-31 | 6 |
vascular lymphangioblast | 7.05e-31 | 6 |
mesodermal cell | 1.47e-30 | 121 |
vein endothelial cell | 5.86e-30 | 6 |
squamous epithelial cell | 8.05e-27 | 63 |
aortic endothelial cell | 4.57e-21 | 6 |
endothelial cell of umbilical vein | 2.55e-16 | 3 |
capillary endothelial cell | 6.34e-16 | 3 |
glomerular endothelial cell | 1.55e-15 | 5 |
epithelial cell | 2.01e-14 | 253 |
embryonic cell | 2.69e-12 | 250 |
thoracic aorta endothelial cell | 2.34e-11 | 2 |
glomerular cell | 3.86e-11 | 7 |
kidney corpuscule cell | 3.86e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
connective tissue cancer | 4.07e-08 | 6 |
musculoskeletal system cancer | 4.07e-08 | 6 |
chondrosarcoma | 9.91e-07 | 1 |
extraosseous chondrosarcoma | 9.91e-07 | 1 |
myxoid chondrosarcoma | 9.91e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 9.91e-07 | 1 |