FFCP PHASE1:Hg19::chr12:121972519..121972545,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84678 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13610 | |||
|TSSclassifier=strong | |||
|UniProt=F5H6N6 | |||
|association_with_transcript=19bp_to_ENST00000545022_5end | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_10_at_KDM2B_5end | |||
|id=chr12:121972519..121972545,- | |||
|ontology_enrichment_celltype=CL:0000542!4.77e-38!53;CL:0000051!4.77e-38!53;CL:0000838!4.79e-36!52;CL:0000738!6.04e-33!140;CL:0000988!7.04e-28!182;CL:0000037!1.03e-25!172;CL:0000566!1.03e-25!172;CL:0002087!1.12e-24!119;CL:0000990!5.28e-24!8;CL:0002032!1.83e-23!165;CL:0000837!1.83e-23!165;CL:0000945!3.77e-22!24;CL:0000826!3.77e-22!24;CL:0002031!5.59e-22!124;CL:0000451!2.81e-19!10;CL:0000840!7.59e-16!5;CL:0001029!7.59e-16!5;CL:0000080!8.65e-16!6;CL:0000453!8.13e-15!5;CL:0000084!1.14e-10!25;CL:0000827!1.14e-10!25;CL:0000791!2.47e-10!18;CL:0000789!2.47e-10!18;CL:0002420!2.47e-10!18;CL:0002419!2.47e-10!18;CL:0000790!2.47e-10!18;CL:0000623!1.24e-08!3;CL:0000825!1.24e-08!3;CL:0000767!2.20e-08!3;CL:0000842!8.82e-08!3;CL:0000624!2.48e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000990;3.56e-26;8!CL:0000453;2.88e-22;5!CL:0000451;2.49e-21;10!CL:0000945;1.54e-20;24!CL:0000542;6.54e-17;53!CL:0000840;3.02e-10;5!CL:0000084;1.28e-08;25!CL:0000791;1.53e-08;18!CL:0000789;1.53e-08;18!CL:0002419;1.53e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.42e-31,53;CL:0000051,1.42e-31,53;CL:0000838,2.01e-28,52;CL:0000990,4.43e-26,8;CL:0000738,1.39e-22,136;CL:0000453,2.88e-22,5;CL:0000988,9.71e-22,177;CL:0000451,2.97e-21,10;CL:0000945,1.38e-20,24;CL:0000826,1.38e-20,24;CL:0002032,2.21e-18,161;CL:0000837,2.21e-18,161;CL:0000037,1.99e-17,168;CL:0002087,4.43e-16,115;CL:0002031,2.50e-15,120;CL:0000840,3.55e-10,5;CL:0001029,3.55e-10,5;CL:0000084,1.34e-08,25;CL:0000827,1.34e-08,25;CL:0000791,1.61e-08,18;CL:0000789,1.61e-08,18;CL:0002420,1.61e-08,18;CL:0002419,1.61e-08,18;CL:0000790,1.61e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000051;6.54e-17;53!CL:0000790;1.53e-08;18 | |||
|ontology_enrichment_disease=DOID:0060058!5.73e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:630;7.45e-08;1!DOID:0050177;7.45e-08;1!DOID:0050427;7.45e-08;1!DOID:12603;1.35e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,7.45e-08,1;DOID:0050177,7.45e-08,1;DOID:0050427,7.45e-08,1;DOID:12603,1.11e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!5.15e-10!15;UBERON:0000179!5.15e-10!15;UBERON:0000463!5.15e-10!15;UBERON:0004177!4.30e-09!7;UBERON:0002106!2.09e-08!3;UBERON:0004854!2.09e-08!3;UBERON:0009034!2.09e-08!3;UBERON:0002095!2.09e-08!3;UBERON:0004782!2.09e-08!3;UBERON:0003281!2.09e-08!3;UBERON:0009664!2.09e-08!3;UBERON:0002296!2.09e-08!3;UBERON:0005602!2.09e-08!3;UBERON:0001179!2.09e-08!3;UBERON:0006293!2.09e-08!3;UBERON:0002193!9.41e-08!112;UBERON:0002390!2.54e-07!102;UBERON:0003061!2.54e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21598876669059,3.20192298854788,2.51874500203774,1.18009283054671,0.767658796194425,0.309632246632152,0,0,0,0.0774672005803016,0.710846162437108,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0,0,0,0,1.70763890732835,5.28513470433845,2.6759125968766,0,1.68152568894461,0,0.983548850569165,1.57204305099666,1.23360899399706,0,0,0,0,0.779873198196215,0.294605907474837,0,0.541607727530031,0.896639238079726,1.43065282315866,0,0,0,0,0,0,0,0,0.34362744548263,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0.821127996921047,1.00803371612366,1.06976078313403,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.97364218096405,1.39303789839414,1.06366368415092,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,3.23441362289276,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0,0,0,1.67222857613147,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,3.81562896929315,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2678028898636,8.27878390941569,6.68300476834914,0,0,0,0,0,0,0,1.20990716048664,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.99485973130698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,9.67387733671452,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,0,2.19226677085613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.0341860170689,24.7128602982855,32.3859480626572,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921871900446234,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.580120991762195,5.69664588772095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0.904244737704086,0.434523000071005,0,0,0,0,0,0.875576689189638,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,2.24397944612263 | |||
|short_description=p10@KDM2B | |||
}} |
Revision as of 16:21, 11 January 2014
Short description: | p10@KDM2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_KDM2B_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | 19bp_to_ENST00000545022_5end |
EntrezGene: | KDM2B |
HGNC: | 13610 |
UniProt: | F5H6N6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.42e-31 | 53 |
common lymphoid progenitor | 1.42e-31 | 53 |
lymphoid lineage restricted progenitor cell | 2.01e-28 | 52 |
conventional dendritic cell | 4.43e-26 | 8 |
leukocyte | 1.39e-22 | 136 |
Langerhans cell | 2.88e-22 | 5 |
hematopoietic cell | 9.71e-22 | 177 |
dendritic cell | 2.97e-21 | 10 |
lymphocyte of B lineage | 1.38e-20 | 24 |
pro-B cell | 1.38e-20 | 24 |
hematopoietic oligopotent progenitor cell | 2.21e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.21e-18 | 161 |
hematopoietic stem cell | 1.99e-17 | 168 |
nongranular leukocyte | 4.43e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 2.50e-15 | 120 |
immature conventional dendritic cell | 3.55e-10 | 5 |
common dendritic progenitor | 3.55e-10 | 5 |
T cell | 1.34e-08 | 25 |
pro-T cell | 1.34e-08 | 25 |
mature alpha-beta T cell | 1.61e-08 | 18 |
alpha-beta T cell | 1.61e-08 | 18 |
immature T cell | 1.61e-08 | 18 |
mature T cell | 1.61e-08 | 18 |
immature alpha-beta T cell | 1.61e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.45e-08 | 1 |
monogenic disease | 7.45e-08 | 1 |
xeroderma pigmentosum | 7.45e-08 | 1 |
acute leukemia | 1.11e-07 | 1 |