FFCP PHASE1:Hg19::chr13:49078915..49078926,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3378 | |||
|description=CAGE_peak_at_chr13:49078915..49078926,- | |||
|id=chr13:49078915..49078926,- | |||
|ontology_enrichment_celltype=CL:0002127!5.53e-17!1;CL:0000914!5.53e-17!1;CL:0000911!5.53e-17!1;CL:0000814!5.53e-17!1;CL:0002042!5.53e-17!1;CL:0002039!5.53e-17!1;CL:0002040!5.53e-17!1;CL:0002041!5.53e-17!1;CL:0000084!3.23e-10!25;CL:0000827!3.23e-10!25;CL:0000893!3.71e-09!2;CL:0002489!3.71e-09!2;CL:0000809!3.71e-09!2;CL:0000808!3.71e-09!2;CL:0000894!3.71e-09!2;CL:0000806!3.71e-09!2;CL:0000807!3.71e-09!2;CL:0000805!3.71e-09!2;CL:0002425!3.71e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.39e-66;1!CL:0000911;2.39e-66;1!CL:0000814;2.39e-66;1!CL:0000084;1.03e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.39e-66,1;CL:0000914,2.39e-66,1;CL:0000911,2.39e-66,1;CL:0000814,2.39e-66,1;CL:0002042,2.39e-66,1;CL:0002039,2.39e-66,1;CL:0002040,2.39e-66,1;CL:0002041,2.39e-66,1;CL:0000893,5.04e-34,2;CL:0002489,5.04e-34,2;CL:0000809,5.04e-34,2;CL:0000808,5.04e-34,2;CL:0000894,5.04e-34,2;CL:0000806,5.04e-34,2;CL:0000807,5.04e-34,2;CL:0000805,5.04e-34,2;CL:0002425,5.04e-34,2;CL:0000084,1.03e-11,25;CL:0000827,1.03e-11,25 | |||
|ontology_enrichment_development_v019=CL:0002425;5.04e-34;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1240;2.59e-12;39!DOID:2531;6.97e-12;51!DOID:0060083;6.97e-12;51!DOID:1036;1.24e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.93e-16,39;DOID:2531,1.06e-12,51;DOID:0060083,1.06e-12,51;DOID:1036,1.24e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0002372!3.07e-16!1;UBERON:0001961!3.07e-16!1;UBERON:0001744!3.07e-16!1;UBERON:0001735!3.07e-16!1;UBERON:0001042!4.81e-07!10;UBERON:0009145!4.81e-07!10 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.69e-18,4;UBERON:0005058,8.69e-18,4;UBERON:0009113,8.69e-18,4;UBERON:0003295,8.69e-18,4;UBERON:0005562,8.69e-18,4;UBERON:0003351,2.45e-12,6;UBERON:0004177,8.99e-11,7;UBERON:0005057,8.99e-11,7;UBERON:0000974,6.13e-08,10;UBERON:0003408,6.13e-08,10;UBERON:0001042,6.13e-08,10;UBERON:0009145,6.13e-08,10;UBERON:0006562,2.47e-07,11;UBERON:0009722,2.47e-07,11;UBERON:0007690,2.47e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.5115813508155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,1.48171507906718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.482525603062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:49078915..49078926,- | |||
}} |
Revision as of 17:44, 11 January 2014
Short description: | p@chr13:49078915..49078926, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:49078915..49078926, - |
Coexpression cluster: | C3378_chronic_NK_acute_CD4_cord_leukemia_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.39e-66 | 1 |
immature NK T cell | 2.39e-66 | 1 |
effector T cell | 2.39e-66 | 1 |
mature NK T cell | 2.39e-66 | 1 |
immature NK T cell stage IV | 2.39e-66 | 1 |
immature NK T cell stage I | 2.39e-66 | 1 |
immature NK T cell stage II | 2.39e-66 | 1 |
immature NK T cell stage III | 2.39e-66 | 1 |
thymocyte | 5.04e-34 | 2 |
double negative thymocyte | 5.04e-34 | 2 |
double-positive, alpha-beta thymocyte | 5.04e-34 | 2 |
DN4 thymocyte | 5.04e-34 | 2 |
DN1 thymic pro-T cell | 5.04e-34 | 2 |
DN2 thymocyte | 5.04e-34 | 2 |
DN3 thymocyte | 5.04e-34 | 2 |
immature single positive thymocyte | 5.04e-34 | 2 |
early T lineage precursor | 5.04e-34 | 2 |
T cell | 1.03e-11 | 25 |
pro-T cell | 1.03e-11 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.69e-18 | 4 |
hemolymphoid system gland | 8.69e-18 | 4 |
thymic region | 8.69e-18 | 4 |
pharyngeal gland | 8.69e-18 | 4 |
thymus primordium | 8.69e-18 | 4 |
pharyngeal epithelium | 2.45e-12 | 6 |
hemopoietic organ | 8.99e-11 | 7 |
immune organ | 8.99e-11 | 7 |
neck | 6.13e-08 | 10 |
gland of gut | 6.13e-08 | 10 |
chordate pharynx | 6.13e-08 | 10 |
pharyngeal region of foregut | 6.13e-08 | 10 |
pharynx | 2.47e-07 | 11 |
entire pharyngeal arch endoderm | 2.47e-07 | 11 |
early pharyngeal endoderm | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.93e-16 | 39 |
hematologic cancer | 1.06e-12 | 51 |
immune system cancer | 1.06e-12 | 51 |
chronic leukemia | 1.24e-09 | 8 |