FFCP PHASE1:Hg19::chr16:1993170..1993226,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14133 | |||
|TSSclassifier=strong | |||
|UniProt=A8MYR2 | |||
|association_with_transcript=0bp_to_ENST00000399753_5end | |||
|coexpression_cluster_id=C2362 | |||
|description=CAGE_peak_1_at_SEPX1_5end | |||
|id=chr16:1993170..1993226,- | |||
|ontology_enrichment_celltype=CL:0002194!1.26e-14!63;CL:0000576!1.26e-14!63;CL:0000040!1.26e-14!63;CL:0000559!1.26e-14!63;CL:0000766!4.56e-14!76;CL:0002009!4.69e-13!65;CL:0002057!7.44e-12!42;CL:0002371!1.05e-11!591;CL:0000144!5.39e-11!625;CL:0000839!1.07e-10!70;CL:0000548!1.70e-10!679;CL:0000004!1.70e-10!679;CL:0000255!1.70e-10!679;CL:0000860!1.94e-10!45;CL:0000012!4.26e-10!682;CL:0000763!1.29e-09!112;CL:0000049!1.29e-09!112;CL:0000557!1.69e-09!71;CL:0000222!1.21e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.23e-09;48!CL:0000473;1.66e-08;39!CL:0000234;1.66e-08;39!CL:0000860;7.50e-08;33!CL:0002057;7.50e-08;33!CL:0000766;4.67e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,5.23e-16,59;CL:0000576,5.23e-16,59;CL:0000040,5.23e-16,59;CL:0000559,5.23e-16,59;CL:0000766,3.33e-15,72;CL:0002009,2.84e-14,61;CL:0000473,8.09e-14,48;CL:0000234,8.09e-14,48;CL:0000860,7.44e-12,42;CL:0002057,7.44e-12,42;CL:0000839,1.17e-11,66;CL:0000557,2.34e-10,67;CL:0000763,3.22e-10,108;CL:0000049,3.22e-10,108;CL:0000222,1.82e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002057;4.11e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.90e-21!216;UBERON:0000926!3.12e-21!448;UBERON:0004120!3.12e-21!448;UBERON:0006603!3.12e-21!448;UBERON:0002204!8.87e-14!167;UBERON:0002193!3.18e-13!112;UBERON:0002390!6.88e-13!102;UBERON:0003061!6.88e-13!102;UBERON:0002405!6.31e-12!115;UBERON:0002100!1.14e-11!216;UBERON:0005256!1.45e-11!143;UBERON:0009569!4.51e-10!113;UBERON:0002371!6.30e-10!80;UBERON:0003914!1.10e-09!118;UBERON:0001009!2.03e-09!113;UBERON:0002417!4.41e-09!61;UBERON:0000916!4.41e-09!61;UBERON:0004535!7.28e-09!110;UBERON:0004765!9.13e-09!101;UBERON:0001434!9.13e-09!101;UBERON:0001474!1.67e-08!86;UBERON:0005172!4.93e-08!55;UBERON:0005173!4.93e-08!55;UBERON:0003104!2.27e-07!238;UBERON:0009142!2.27e-07!238;UBERON:0000490!5.99e-07!138 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,6.60e-20,203;UBERON:0000926,1.27e-18,315;UBERON:0004120,1.27e-18,315;UBERON:0006603,1.27e-18,315;UBERON:0002204,4.40e-14,167;UBERON:0002193,5.14e-14,108;UBERON:0002390,1.00e-13,98;UBERON:0003061,1.00e-13,98;UBERON:0002100,8.62e-12,199;UBERON:0003104,7.72e-11,160;UBERON:0009142,7.72e-11,160;UBERON:0002371,9.82e-11,76;UBERON:0009569,2.83e-10,112;UBERON:0004765,4.51e-10,90;UBERON:0003914,6.04e-10,117;UBERON:0002405,9.63e-10,93;UBERON:0002417,1.90e-09,60;UBERON:0000916,1.90e-09,60;UBERON:0001009,2.43e-09,112;UBERON:0001434,2.50e-09,100;UBERON:0001474,3.60e-09,82;UBERON:0005256,7.81e-09,122;UBERON:0004535,8.68e-09,109;UBERON:0005172,2.16e-08,54;UBERON:0005173,2.16e-08,54;UBERON:0000490,5.34e-07,148 | |||
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| |||
|short_description=p1@SEPX1 | |||
}} |
Revision as of 01:49, 12 January 2014
Short description: | p1@SEPX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEPX1_5end |
Coexpression cluster: | C2362_Neutrophils_CD14_Whole_Eosinophils_Hepatocyte_Mesenchymal_blood |
Association with transcript: | 0bp_to_ENST00000399753_5end |
EntrezGene: | NA |
HGNC: | 14133 |
UniProt: | A8MYR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 5.23e-16 | 59 |
monocyte | 5.23e-16 | 59 |
monoblast | 5.23e-16 | 59 |
promonocyte | 5.23e-16 | 59 |
myeloid leukocyte | 3.33e-15 | 72 |
macrophage dendritic cell progenitor | 2.84e-14 | 61 |
defensive cell | 8.09e-14 | 48 |
phagocyte | 8.09e-14 | 48 |
classical monocyte | 7.44e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.44e-12 | 42 |
myeloid lineage restricted progenitor cell | 1.17e-11 | 66 |
granulocyte monocyte progenitor cell | 2.34e-10 | 67 |
myeloid cell | 3.22e-10 | 108 |
common myeloid progenitor | 3.22e-10 | 108 |
mesodermal cell | 1.82e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 6.60e-20 | 203 |
mesoderm | 1.27e-18 | 315 |
mesoderm-derived structure | 1.27e-18 | 315 |
presumptive mesoderm | 1.27e-18 | 315 |
musculoskeletal system | 4.40e-14 | 167 |
hemolymphoid system | 5.14e-14 | 108 |
hematopoietic system | 1.00e-13 | 98 |
blood island | 1.00e-13 | 98 |
trunk | 8.62e-12 | 199 |
mesenchyme | 7.72e-11 | 160 |
entire embryonic mesenchyme | 7.72e-11 | 160 |
bone marrow | 9.82e-11 | 76 |
subdivision of trunk | 2.83e-10 | 112 |
skeletal element | 4.51e-10 | 90 |
epithelial tube | 6.04e-10 | 117 |
immune system | 9.63e-10 | 93 |
abdominal segment of trunk | 1.90e-09 | 60 |
abdomen | 1.90e-09 | 60 |
circulatory system | 2.43e-09 | 112 |
skeletal system | 2.50e-09 | 100 |
bone element | 3.60e-09 | 82 |
trunk mesenchyme | 7.81e-09 | 122 |
cardiovascular system | 8.68e-09 | 109 |
abdomen element | 2.16e-08 | 54 |
abdominal segment element | 2.16e-08 | 54 |
unilaminar epithelium | 5.34e-07 | 148 |