FFCP PHASE1:Hg19::chr17:7401984..7401988,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:7401984..7401988,+ | |||
|id=chr17:7401984..7401988,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.45e-09!140;CL:0000037!8.30e-09!172;CL:0000566!8.30e-09!172;CL:0002031!2.63e-08!124;CL:0000988!4.90e-08!182;CL:0002087!6.30e-08!119;CL:0002032!1.10e-07!165;CL:0000837!1.10e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000623;3.61e-14;3!CL:0000791;7.03e-14;18!CL:0000789;7.03e-14;18!CL:0002419;7.03e-14;18!CL:0002127;2.96e-11;1!CL:0000911;2.96e-11;1!CL:0000222;2.96e-11;1!CL:0000814;2.96e-11;1!CL:0000084;5.80e-10;25!CL:0000625;8.76e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.87e-14,3;CL:0000825,3.87e-14,3;CL:0000791,7.44e-14,18;CL:0000789,7.44e-14,18;CL:0002420,7.44e-14,18;CL:0002419,7.44e-14,18;CL:0000790,7.44e-14,18;CL:0002127,2.68e-11,1;CL:0000914,2.68e-11,1;CL:0000911,2.68e-11,1;CL:0000814,2.68e-11,1;CL:0002042,2.68e-11,1;CL:0002039,2.68e-11,1;CL:0002040,2.68e-11,1;CL:0002041,2.68e-11,1;CL:0000084,6.04e-10,25;CL:0000827,6.04e-10,25;CL:0000625,9.89e-09,11;CL:0000838,1.01e-08,52;CL:0000542,1.52e-08,53;CL:0000051,1.52e-08,53 | |||
|ontology_enrichment_development_v019=CL:0000790;7.03e-14;18!UBERON:0005425;2.96e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.96e-11;1!UBERON:0001785;2.96e-11;1!UBERON:0002464;2.96e-11;1!UBERON:0004904;2.96e-11;1!UBERON:0001021;2.96e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.78e-11,1;UBERON:0001785,1.78e-11,1;UBERON:0002464,1.78e-11,1;UBERON:0004904,1.78e-11,1;UBERON:0001021,1.78e-11,1;UBERON:0003902,1.78e-11,1;UBERON:0005425,1.78e-11,1 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0.472264687882075,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0.154934401160603,0,0.293600439334847,0,0.401088894940283,0,0.223915474239924,0,0,0.290796477559129,0,0.242584061187816,0.929716147622738,0,0.309706370895104,1.1507695692886,0.256160706529101,0,0,0,0,0.376484679085209,0,0,0,0,0.639337125799041,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0.632924774881769,0.422510572623884,0,0.419317291016752,0.336985893439485,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,0.983548850569165,2.75107533924415,0.616804496998528,0,0.977766799900771,0.473447805734733,0,0.111410456885174,0.294605907474837,0.664601683750863,0.541607727530031,0.512365278902701,0.260118695119756,0.493313713811028,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,1.41124720257313,1.06976078313403,2.02754165435919,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0.805658634218294,0,0,0.367663080345869,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.529636723252875,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0.10075209822764,0,0,0,0.286804595389004,0,0.132529768321485,0,0.10366105501537,0,0,0,0,1.38134921352481,0.464367928031979,0,0,0,0.723033089650446,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0.100528972411631,0,0,0,0,0.34779121492523,0,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0.621984346622316,0,0.6312121671319,0.126995788584338,0,1.17217447210047,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,1.2162378064119,0,0,0,0,0,0,0,0,1.34502172792233,0.591092280605782,1.07813787429759,1.41177339907723,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0,0.300946099727719,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.853820462427555,0.606255142892519,0,0,0,0.460385919864187,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0.0920809889358963,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0.206082023295445,0,0.165018999841176,0,0,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0,0,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,0,0.106824071127473,0,0.245040215981032,0.185803175125719,0.432807638929335,0.0711418433484141,0.478278818186467,0.199579371432817,0,0,0,0,0.456469358066384,0,2.50634477090067,0.50787533340481,0,0,0.851692475380653,0.687010689511529,0,0,0,0.19538809540204,0,0,0,0.66614393599564,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0.307160702099232,0,0.422008249231538,0.333926115068718,0.16480387422676,4.85588438694385,0.398495976502139,0.552567831062295,0,0,0.369254416383208,0,0.449341755736634,0.179021174675609,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0.583209226766509,0,0,0,0,0.221158519862449,0.591095237907095,0,0.10893846351899,0.41827123283581,0.153900517007594,0.341826167541004,0.46112780877612,0,0.108647371922008,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0.37950746544837,0,0,0,0.141353071433941,0.216388639742091,0.995261931078505,0.353830258013357,0,0.296521128680622,0,0.104421949505455,0.067401132980677,0.802577647298789,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0.174118413160805,0,0.343972064943233,0.19351266257817,0,0.246346371159628,0.0969890164884194,0,0.225980740780532,0.411125773940253,0.19871461170299,0,0,0.160317640503067,0,0,0,0.114536596165916,0,0,0.49701014226173,0.235694034616795,0,0.104602846312333,0.305994652908965,0.288950589901519,0,0.410716136675979,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0,0.399358000997982,0,0,0.0671834724867263,0.720599767084807,0,0.393915911536118,0.164831716762333,0.0674035438541849,0,0.169346664131569,0,0.136203406111576,0.482259445395058,0.275078873194468,0,0.2249738915515,0.77380195455795,0.0607495566580247,0,0,0.0524545881349981,0,0,0.575745591958336,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0,0.1133120915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| |||
|short_description=p@chr17:7401984..7401988,+ | |||
}} |
Revision as of 13:33, 20 January 2014
Short description: | p@chr17:7401984..7401988, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:7401984..7401988, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.87e-14 | 3 |
pro-NK cell | 3.87e-14 | 3 |
mature alpha-beta T cell | 7.44e-14 | 18 |
alpha-beta T cell | 7.44e-14 | 18 |
immature T cell | 7.44e-14 | 18 |
mature T cell | 7.44e-14 | 18 |
immature alpha-beta T cell | 7.44e-14 | 18 |
innate effector T cell | 2.68e-11 | 1 |
immature NK T cell | 2.68e-11 | 1 |
effector T cell | 2.68e-11 | 1 |
mature NK T cell | 2.68e-11 | 1 |
immature NK T cell stage IV | 2.68e-11 | 1 |
immature NK T cell stage I | 2.68e-11 | 1 |
immature NK T cell stage II | 2.68e-11 | 1 |
immature NK T cell stage III | 2.68e-11 | 1 |
T cell | 6.04e-10 | 25 |
pro-T cell | 6.04e-10 | 25 |
CD8-positive, alpha-beta T cell | 9.89e-09 | 11 |
lymphoid lineage restricted progenitor cell | 1.01e-08 | 52 |
lymphocyte | 1.52e-08 | 53 |
common lymphoid progenitor | 1.52e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.78e-11 | 1 |
cranial nerve | 1.78e-11 | 1 |
nerve trunk | 1.78e-11 | 1 |
nerve connecting eye with brain | 1.78e-11 | 1 |
nerve | 1.78e-11 | 1 |
retinal neural layer | 1.78e-11 | 1 |
presumptive neural retina | 1.78e-11 | 1 |