FFCP PHASE1:Hg19::chr18:60262589..60262593,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:60262589..60262593,+ | |||
|id=chr18:60262589..60262593,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002127;1.84e-34;1!CL:0000911;1.84e-34;1!CL:0000814;1.84e-34;1!CL:0002379;5.05e-34;1!CL:0000047;9.07e-18;2!CL:0002535;9.07e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.84e-34,1;CL:0000914,1.84e-34,1;CL:0000911,1.84e-34,1;CL:0000814,1.84e-34,1;CL:0002042,1.84e-34,1;CL:0002039,1.84e-34,1;CL:0002040,1.84e-34,1;CL:0002041,1.84e-34,1;CL:0002379,7.06e-34,1;CL:0000893,5.48e-18,2;CL:0002489,5.48e-18,2;CL:0000809,5.48e-18,2;CL:0000808,5.48e-18,2;CL:0000894,5.48e-18,2;CL:0000806,5.48e-18,2;CL:0000807,5.48e-18,2;CL:0000805,5.48e-18,2;CL:0002425,5.48e-18,2;CL:0002535,6.48e-18,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.05e-34;1!CL:0002425;5.48e-18;2!UBERON:0003056;2.59e-12;3 | |||
|ontology_enrichment_disease=DOID:14566!1.04e-09!239;DOID:162!1.06e-09!235;DOID:0050686!5.52e-08!137;DOID:0050687!2.42e-07!143;DOID:305!2.52e-07!106;DOID:170!9.02e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3620;5.05e-34;1!DOID:3565;5.05e-34;1!DOID:4362;6.55e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,7.06e-34,1;DOID:3565,7.06e-34,1;DOID:4362,5.73e-08,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;5.05e-34;1!UBERON:0001785;5.05e-34;1!UBERON:0002464;5.05e-34;1!UBERON:0004904;5.05e-34;1!UBERON:0001021;5.05e-34;1!UBERON:0003714;9.07e-18;2!UBERON:0005162;9.07e-18;2!UBERON:0000122;9.07e-18;2!UBERON:0006955;9.07e-18;2!UBERON:0004801;9.07e-18;2!UBERON:0000002;8.48e-07;6!UBERON:0001560;8.48e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.61e-34,1;UBERON:0001785,3.61e-34,1;UBERON:0002464,3.61e-34,1;UBERON:0004904,3.61e-34,1;UBERON:0001021,3.61e-34,1;UBERON:0003902,3.61e-34,1;UBERON:0005425,3.61e-34,1;UBERON:0006955,6.48e-18,2;UBERON:0004801,6.48e-18,2;UBERON:0003714,7.67e-18,2;UBERON:0005162,7.67e-18,2;UBERON:0000122,7.67e-18,2;UBERON:0002370,1.12e-09,4;UBERON:0005058,1.12e-09,4;UBERON:0009113,1.12e-09,4;UBERON:0003295,1.12e-09,4;UBERON:0005562,1.12e-09,4;UBERON:0001781,1.32e-09,4;UBERON:0003351,7.17e-07,6;UBERON:0000002,7.58e-07,6;UBERON:0001560,7.58e-07,6;UBERON:0000966,8.02e-07,6;UBERON:0005388,8.02e-07,6;UBERON:0001802,8.02e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0.502497330513487,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01753259188349,0,0,0.128343036279748,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0.432807638929335,0,0,0,0.191505370132367,0,0,0,0.456469358066384,0,0,0.677167111206413,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.890469640183247,0.16480387422676,1.05562704063997,0,0.276283915531148,1.51159648712566,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0.437299999980979,0,0,0,0,0.344743373241465,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0.21787692703798,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0.37950746544837,0,0,0.326465616318295,0,0.216388639742091,0,0.0884575645033392,0,0.889563386041866,0.370691816839509,0.417687798021821,0,0,0,0,0.391329237864179,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0,0,0,0,0.0882561266915003,0,0,0,0,0,0.561111741760736,0,0.39961921916426,0,0.114536596165916,0,0.14405479798815,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0.633602019116439,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0.129282956361551,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0.110929051536852,0,0.276697269872462,0,0.151649117541648,0,1.17632909849086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0.184105950251841,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0.315446980005013,0,0,0,0,0,0,0,0,0,0.161475645631851,1.42769420259154,0.0981477185010256,0,0,0,0.381382095467167,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0.0887023701626388,0.115233987555779,0,0,0,0.354581522651905,0.222462803784138,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0.485710993059139,0,0,0,0.22589216407792,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0.535928260312357,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr18:60262589..60262593,+ | |||
}} |
Revision as of 19:38, 20 January 2014
Short description: | p@chr18:60262589..60262593, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:60262589..60262593, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.84e-34 | 1 |
immature NK T cell | 1.84e-34 | 1 |
effector T cell | 1.84e-34 | 1 |
mature NK T cell | 1.84e-34 | 1 |
immature NK T cell stage IV | 1.84e-34 | 1 |
immature NK T cell stage I | 1.84e-34 | 1 |
immature NK T cell stage II | 1.84e-34 | 1 |
immature NK T cell stage III | 1.84e-34 | 1 |
meningothelial cell | 7.06e-34 | 1 |
thymocyte | 5.48e-18 | 2 |
double negative thymocyte | 5.48e-18 | 2 |
double-positive, alpha-beta thymocyte | 5.48e-18 | 2 |
DN4 thymocyte | 5.48e-18 | 2 |
DN1 thymic pro-T cell | 5.48e-18 | 2 |
DN2 thymocyte | 5.48e-18 | 2 |
DN3 thymocyte | 5.48e-18 | 2 |
immature single positive thymocyte | 5.48e-18 | 2 |
early T lineage precursor | 5.48e-18 | 2 |
epithelial cell of cervix | 6.48e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.61e-34 | 1 |
cranial nerve | 3.61e-34 | 1 |
nerve trunk | 3.61e-34 | 1 |
nerve connecting eye with brain | 3.61e-34 | 1 |
nerve | 3.61e-34 | 1 |
retinal neural layer | 3.61e-34 | 1 |
presumptive neural retina | 3.61e-34 | 1 |
uterine epithelium | 6.48e-18 | 2 |
cervix epithelium | 6.48e-18 | 2 |
neural tissue | 7.67e-18 | 2 |
multi cell component structure | 7.67e-18 | 2 |
neuron projection bundle | 7.67e-18 | 2 |
thymus | 1.12e-09 | 4 |
hemolymphoid system gland | 1.12e-09 | 4 |
thymic region | 1.12e-09 | 4 |
pharyngeal gland | 1.12e-09 | 4 |
thymus primordium | 1.12e-09 | 4 |
layer of retina | 1.32e-09 | 4 |
pharyngeal epithelium | 7.17e-07 | 6 |
uterine cervix | 7.58e-07 | 6 |
neck of organ | 7.58e-07 | 6 |
retina | 8.02e-07 | 6 |
photoreceptor array | 8.02e-07 | 6 |
posterior segment of eyeball | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 7.06e-34 | 1 |
meningioma | 7.06e-34 | 1 |
cervical cancer | 5.73e-08 | 5 |