FFCP PHASE1:Hg19::chr19:2427863..2427915,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26517 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11816 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y5L4 | |||
|association_with_transcript=0bp_to_ENST00000215570,NM_012458,uc002lvx.1_5end | |||
|description=CAGE_peak_2_at_TIMM13_5end | |||
|id=chr19:2427863..2427915,- | |||
|ontology_enrichment_celltype=CL:0000144!3.88e-15!625;CL:0002321!6.97e-11!248;CL:0002371!7.51e-11!591;CL:0000220!2.17e-10!246;CL:0000012!3.38e-10!682;CL:0000548!3.09e-09!679;CL:0000004!3.09e-09!679;CL:0000255!3.09e-09!679;CL:0000325!5.93e-08!39;CL:0000222!7.91e-08!119;CL:0000115!3.96e-07!35 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.58e-11,250;CL:0000222,5.48e-08,121;CL:0000115,2.50e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.24e-07!118 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.18e-07,117;UBERON:0007503,7.14e-07,78 | |||
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| |||
|short_description=p2@TIMM13 | |||
}} |
Revision as of 20:24, 20 January 2014
Short description: | p2@TIMM13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TIMM13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000215570, NM_012458, uc002lvx.1_5end |
EntrezGene: | TIMM13 |
HGNC: | 11816 |
UniProt: | Q9Y5L4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.58e-11 | 250 |
mesodermal cell | 5.48e-08 | 121 |
endothelial cell | 2.50e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.18e-07 | 117 |
epithelial vesicle | 7.14e-07 | 78 |