FFCP PHASE1:Hg19::chr19:9968816..9968862,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93145 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17189 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002mmo.2_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_4_at_OLFM2_5end | |||
|id=chr19:9968816..9968862,- | |||
|ontology_enrichment_celltype=CL:0000791!1.85e-27!18;CL:0000789!1.85e-27!18;CL:0002420!1.85e-27!18;CL:0002419!1.85e-27!18;CL:0000790!1.85e-27!18;CL:0000084!8.42e-25!25;CL:0000827!8.42e-25!25;CL:0000625!4.15e-18!11;CL:0000838!8.16e-12!52;CL:0000542!1.85e-11!53;CL:0000051!1.85e-11!53;CL:0000738!1.45e-10!140;CL:0000624!4.19e-10!6;CL:0000037!6.20e-08!172;CL:0000566!6.20e-08!172;CL:0000453!3.90e-07!5;CL:0002032!5.01e-07!165;CL:0000837!5.01e-07!165;CL:0000988!7.05e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.03e-39;18!CL:0000789;3.03e-39;18!CL:0002419;3.03e-39;18!CL:0000084;6.90e-31;25!CL:0000625;1.25e-29;11!CL:0000624;7.66e-14;6!CL:0000898;4.19e-11;3!CL:0000226;8.40e-10;3!CL:0000842;8.40e-10;3!CL:0000542;1.50e-08;53!CL:0000815;3.88e-08;2!CL:0000792;3.88e-08;2!CL:0002677;3.88e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.15e-39,18;CL:0000789,2.15e-39,18;CL:0002420,2.15e-39,18;CL:0002419,2.15e-39,18;CL:0000790,2.15e-39,18;CL:0000084,6.16e-31,25;CL:0000827,6.16e-31,25;CL:0000625,1.01e-29,11;CL:0000838,1.63e-14,52;CL:0000542,3.67e-14,53;CL:0000051,3.67e-14,53;CL:0000624,6.59e-14,6;CL:0000898,4.33e-11,3;CL:0000226,6.94e-10,3;CL:0000842,6.94e-10,3;CL:0000815,3.95e-08,2;CL:0000792,3.95e-08,2;CL:0002677,3.95e-08,2;CL:0000738,4.84e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;3.03e-39;18!CL:0000051;1.50e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-15!115;UBERON:0000178!3.16e-14!15;UBERON:0000179!3.16e-14!15;UBERON:0000463!3.16e-14!15;UBERON:0004177!2.82e-08!7;UBERON:0002370!3.06e-07!4;UBERON:0005058!3.06e-07!4;UBERON:0009113!3.06e-07!4;UBERON:0003295!3.06e-07!4;UBERON:0005562!3.06e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.29e-28;15!UBERON:0000179;1.29e-28;15!UBERON:0000463;1.29e-28;15!UBERON:0002390;6.31e-18;32!UBERON:0002193;1.32e-12;42!UBERON:0002370;1.78e-08;2!UBERON:0005058;1.78e-08;2!UBERON:0009113;1.78e-08;2!UBERON:0001829;3.24e-07;2!UBERON:0004177;7.68e-07;5!UBERON:0005057;7.68e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.04e-28,15;UBERON:0000179,1.04e-28,15;UBERON:0000463,1.04e-28,15;UBERON:0002370,1.14e-08,4;UBERON:0005058,1.14e-08,4;UBERON:0009113,1.14e-08,4;UBERON:0003295,1.14e-08,4;UBERON:0005562,1.14e-08,4;UBERON:0003408,2.97e-08,10;UBERON:0004177,4.28e-08,7;UBERON:0005057,4.28e-08,7;UBERON:0001829,4.00e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0,0.217010870715852,0,0.971680998056939,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,1.96709770113833,0.393010762749165,3.28962398399215,25.7467202901644,11.0813570655421,7.101717086021,7.79306913631645,20.9451658944126,9.42738903919479,10.8551608345974,12.4569777331907,18.1889674010459,19.6389614815416,18.5814832202154,17.4100511205084,17.3881851441032,9.04548035288569,6.42097987415311,7.31748666634838,15.410070606869,5.74830740402882,13.4014703738226,4.30133476433155,11.1497895013434,8.46408490013344,17.1081368000707,7.67933107296641,8.19114311388278,8.74515085866421,15.3905213828611,10.6746639599736,1.81446068902259,0.802320587350522,2.60683926989038,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.792435906119034,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0.985153801009636,1.07813787429759,0.513372145118994,0,0,0,0,0,0,5.9832291840805,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,1.72571360654893,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,7.10426652925037,3.0585488285695,7.40541343326411,9.76750279376935,6.9931586424653,2.59389324477087,3.7802200606668,4.75875105776562,0,0,0,0,0,0.640276590135727,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,3.03912307084262,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.353830258013357,1.22206028986725,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,1.5476039091159,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0.828478110694391,1.9846640872478,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.389720617678777,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,1.09651553371436,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.848915739187391,0.655678681511872,0,0,0,0,0,0,0,0.845855261818682,1.74036297528658,0,0,0,0,0,2.2936464170227,0,0,0.271965960763659,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0.714193294391221,37.7199233442276,13.5943624307929,0,0.0636471582781649,0.202117188958219,0,0.342233301085281,6.06168477131288,0.430333232356058,0,0,0,0,0,0,0.244482888365733,0,0,8.05095174364105,0 | |||
|short_description=p4@OLFM2 | |||
}} |
Revision as of 21:11, 20 January 2014
Short description: | p4@OLFM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_OLFM2_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_uc002mmo.2_5end |
EntrezGene: | OLFM2 |
HGNC: | 17189 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.15e-39 | 18 |
alpha-beta T cell | 2.15e-39 | 18 |
immature T cell | 2.15e-39 | 18 |
mature T cell | 2.15e-39 | 18 |
immature alpha-beta T cell | 2.15e-39 | 18 |
T cell | 6.16e-31 | 25 |
pro-T cell | 6.16e-31 | 25 |
CD8-positive, alpha-beta T cell | 1.01e-29 | 11 |
lymphoid lineage restricted progenitor cell | 1.63e-14 | 52 |
lymphocyte | 3.67e-14 | 53 |
common lymphoid progenitor | 3.67e-14 | 53 |
CD4-positive, alpha-beta T cell | 6.59e-14 | 6 |
naive T cell | 4.33e-11 | 3 |
single nucleate cell | 6.94e-10 | 3 |
mononuclear cell | 6.94e-10 | 3 |
regulatory T cell | 3.95e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.95e-08 | 2 |
naive regulatory T cell | 3.95e-08 | 2 |
leukocyte | 4.84e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 1.04e-28 | 15 |
haemolymphatic fluid | 1.04e-28 | 15 |
organism substance | 1.04e-28 | 15 |
thymus | 1.14e-08 | 4 |
hemolymphoid system gland | 1.14e-08 | 4 |
thymic region | 1.14e-08 | 4 |
pharyngeal gland | 1.14e-08 | 4 |
thymus primordium | 1.14e-08 | 4 |
gland of gut | 2.97e-08 | 10 |
hemopoietic organ | 4.28e-08 | 7 |
immune organ | 4.28e-08 | 7 |
major salivary gland | 4.00e-07 | 2 |