FFCP PHASE1:Hg19::chr19:18239200..18239212,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:18239200..18239212,+ | |||
|id=chr19:18239200..18239212,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.37e-29;1!CL:0000911;2.37e-29;1!CL:0000814;2.37e-29;1!CL:0002593;2.05e-15;2!CL:0002595;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.37e-29,1;CL:0000914,2.37e-29,1;CL:0000911,2.37e-29,1;CL:0000814,2.37e-29,1;CL:0002042,2.37e-29,1;CL:0002039,2.37e-29,1;CL:0002040,2.37e-29,1;CL:0002041,2.37e-29,1;CL:0000893,2.05e-15,2;CL:0002489,2.05e-15,2;CL:0000809,2.05e-15,2;CL:0000808,2.05e-15,2;CL:0000894,2.05e-15,2;CL:0000806,2.05e-15,2;CL:0000807,2.05e-15,2;CL:0000805,2.05e-15,2;CL:0002425,2.05e-15,2;CL:0002593,2.37e-15,2;CL:0002595,6.39e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002425;2.05e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.52e-25!115;UBERON:0001049!1.76e-12!57;UBERON:0005068!1.76e-12!57;UBERON:0006241!1.76e-12!57;UBERON:0007135!1.76e-12!57;UBERON:0002780!3.02e-12!41;UBERON:0001890!3.02e-12!41;UBERON:0006240!3.02e-12!41;UBERON:0003080!8.49e-12!42;UBERON:0001893!2.15e-11!34;UBERON:0001869!3.32e-11!32;UBERON:0002020!3.58e-11!34;UBERON:0003528!3.58e-11!34;UBERON:0002616!8.31e-11!59;UBERON:0002791!1.66e-10!33;UBERON:0000955!1.77e-10!69;UBERON:0006238!1.77e-10!69;UBERON:0002619!1.09e-09!22;UBERON:0001950!2.11e-09!20;UBERON:0001017!5.88e-09!82;UBERON:0000178!1.43e-08!15;UBERON:0000179!1.43e-08!15;UBERON:0000463!1.43e-08!15;UBERON:0002390!1.75e-08!102;UBERON:0003061!1.75e-08!102;UBERON:0005743!3.77e-08!86;UBERON:0000956!4.14e-08!25;UBERON:0000203!4.14e-08!25;UBERON:0002193!6.77e-07!112;UBERON:0000153!7.22e-07!129;UBERON:0007811!7.22e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.07e-17;15!UBERON:0000179;1.07e-17;15!UBERON:0000463;1.07e-17;15!UBERON:0002771;1.24e-15;2!UBERON:0002456;2.05e-15;2!UBERON:0002390;2.61e-08;32!UBERON:0003834;6.04e-07;5!UBERON:0001533;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.10e-17,15;UBERON:0000179,1.10e-17,15;UBERON:0000463,1.10e-17,15;UBERON:0002771,1.15e-15,2;UBERON:0002456,2.37e-15,2;UBERON:0002370,2.26e-08,4;UBERON:0005058,2.26e-08,4;UBERON:0009113,2.26e-08,4;UBERON:0003295,2.26e-08,4;UBERON:0005562,2.26e-08,4;UBERON:0003834,6.39e-07,5;UBERON:0001533,6.39e-07,5 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0.257575567634187,0.290796477559129,0.377875943688809,0.242584061187816,0.697287110717054,0.411167888021826,0.619412741790207,0,0,0,0,0,0,0.752969358170419,0.545812300115692,0,0,0,0,0,0,0,0.290209238628584,0,0,0.502497330513487,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.411202997999018,0,0,0.473447805734733,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0.260118695119756,0.164437904603676,0,0.289803085735052,0,0,0,0,0.383220493601921,0,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0.290633938513962,0,0,0.176096868026452,0,0,0.12624243342638,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,1.34502172792233,0.394061520403854,0.431255149719035,0.385029108839245,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.238231775457789,0.411362273086194,0,0,1.58625035258854,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.166849141711909,1.36771666781428,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0.182454789215666,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,2.56255156294123,0,0.573409195690071,0.332787154610557,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0.352675943690684,0.3062454773532,0.128458450192919,0,0.159633859057151,0.41023272848151,0,0.0691572524642179,0.322951291263702,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0.781078098613847,0.413373593002368,0.126831620387814,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0.0887023701626388,0,0,0.135939465953663,0.131545547125698,0,0,0,0.314231179832004,0,0,0,0.47775168788705,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.397901550322736,0.118920090777569,0,0.109940516745429,0.150962843566674,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0.143339583151451,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0.603821380773079,0 | |||
|short_description=p@chr19:18239200..18239212,+ | |||
}} |
Revision as of 22:07, 20 January 2014
Short description: | p@chr19:18239200..18239212, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:18239200..18239212, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.37e-29 | 1 |
immature NK T cell | 2.37e-29 | 1 |
effector T cell | 2.37e-29 | 1 |
mature NK T cell | 2.37e-29 | 1 |
immature NK T cell stage IV | 2.37e-29 | 1 |
immature NK T cell stage I | 2.37e-29 | 1 |
immature NK T cell stage II | 2.37e-29 | 1 |
immature NK T cell stage III | 2.37e-29 | 1 |
thymocyte | 2.05e-15 | 2 |
double negative thymocyte | 2.05e-15 | 2 |
double-positive, alpha-beta thymocyte | 2.05e-15 | 2 |
DN4 thymocyte | 2.05e-15 | 2 |
DN1 thymic pro-T cell | 2.05e-15 | 2 |
DN2 thymocyte | 2.05e-15 | 2 |
DN3 thymocyte | 2.05e-15 | 2 |
immature single positive thymocyte | 2.05e-15 | 2 |
early T lineage precursor | 2.05e-15 | 2 |
smooth muscle cell of the internal thoracic artery | 2.37e-15 | 2 |
smooth muscle cell of the subclavian artery | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
blood | 1.10e-17 | 15 |
haemolymphatic fluid | 1.10e-17 | 15 |
organism substance | 1.10e-17 | 15 |
middle temporal gyrus | 1.15e-15 | 2 |
internal thoracic artery | 2.37e-15 | 2 |
thymus | 2.26e-08 | 4 |
hemolymphoid system gland | 2.26e-08 | 4 |
thymic region | 2.26e-08 | 4 |
pharyngeal gland | 2.26e-08 | 4 |
thymus primordium | 2.26e-08 | 4 |
thoracic segment blood vessel | 6.39e-07 | 5 |
subclavian artery | 6.39e-07 | 5 |