FFCP PHASE1:Hg19::chr19:50004358..50004377,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=406942 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31537 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-233bp_to_NR_029703,uc010yaw.1_5end | |||
|coexpression_cluster_id=C272 | |||
|description=CAGE_peak_2_at_MIR150_5end | |||
|id=chr19:50004358..50004377,- | |||
|ontology_enrichment_celltype=CL:0000838!1.23e-37!52;CL:0000542!1.10e-36!53;CL:0000051!1.10e-36!53;CL:0000738!2.92e-28!140;CL:0002087!1.12e-26!119;CL:0000791!1.04e-25!18;CL:0000789!1.04e-25!18;CL:0002420!1.04e-25!18;CL:0002419!1.04e-25!18;CL:0000790!1.04e-25!18;CL:0000037!1.69e-21!172;CL:0000566!1.69e-21!172;CL:0002031!2.81e-21!124;CL:0000236!5.93e-21!14;CL:0000988!2.45e-19!182;CL:0000084!6.28e-19!25;CL:0000827!6.28e-19!25;CL:0002032!2.72e-17!165;CL:0000837!2.72e-17!165;CL:0000945!1.51e-15!24;CL:0000826!1.51e-15!24;CL:0000625!8.18e-15!11;CL:0000624!1.43e-11!6;CL:0000898!9.47e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;8.32e-35;18!CL:0000789;8.32e-35;18!CL:0002419;8.32e-35;18!CL:0000236;1.82e-29;13!CL:0000542;2.05e-26;53!CL:0000084;5.68e-24;25!CL:0000625;2.47e-20;11!CL:0000624;5.94e-19;6!CL:0000945;1.02e-14;24!CL:0000898;1.33e-10;3!CL:0000623;1.22e-09;3!CL:0000226;4.21e-09;3!CL:0000842;4.21e-09;3!CL:0002087;1.44e-07;104!CL:0000815;1.59e-07;2!CL:0000792;1.59e-07;2!CL:0002677;1.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.50e-44,52;CL:0000542,7.21e-43,53;CL:0000051,7.21e-43,53;CL:0000791,6.21e-35,18;CL:0000789,6.21e-35,18;CL:0002420,6.21e-35,18;CL:0002419,6.21e-35,18;CL:0000790,6.21e-35,18;CL:0000236,3.48e-27,14;CL:0000084,4.63e-24,25;CL:0000827,4.63e-24,25;CL:0002087,3.78e-22,115;CL:0000738,2.87e-21,136;CL:0000625,1.86e-20,11;CL:0000624,5.96e-19,6;CL:0002031,9.71e-17,120;CL:0000037,1.94e-15,168;CL:0000945,9.91e-15,24;CL:0000826,9.91e-15,24;CL:0000988,3.47e-14,177;CL:0002032,2.43e-12,161;CL:0000837,2.43e-12,161;CL:0000898,1.38e-10,3;CL:0000623,1.26e-09,3;CL:0000825,1.26e-09,3;CL:0000226,2.88e-09,3;CL:0000842,2.88e-09,3;CL:0000815,1.65e-07,2;CL:0000792,1.65e-07,2;CL:0002677,1.65e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;8.32e-35;18!CL:0000051;2.05e-26;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.35e-11!15;UBERON:0000179!1.35e-11!15;UBERON:0000463!1.35e-11!15;UBERON:0004177!9.56e-08!7;UBERON:0002390!1.20e-07!102;UBERON:0003061!1.20e-07!102;UBERON:0002193!1.51e-07!112;UBERON:0002370!3.10e-07!4;UBERON:0005058!3.10e-07!4;UBERON:0009113!3.10e-07!4;UBERON:0003295!3.10e-07!4;UBERON:0005562!3.10e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.45e-11;15!UBERON:0000179;6.45e-11;15!UBERON:0000463;6.45e-11;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.94e-11,15;UBERON:0000179,4.94e-11,15;UBERON:0000463,4.94e-11,15;UBERON:0002370,2.81e-07,4;UBERON:0005058,2.81e-07,4;UBERON:0009113,2.81e-07,4;UBERON:0003295,2.81e-07,4;UBERON:0005562,2.81e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,1.53531759238885,0.77408061658038,0,0,0,0.0774672005803016,0,0.293600439334847,0.553995408531877,1.60435557976113,1.30206522429511,0.223915474239924,0.32389366601898,0.257575567634187,0,0.377875943688809,0,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,21.1195493353587,13.1073266702912,17.7901850772711,18.3493995703598,13.6134635592244,25.2891073579973,21.1534359291156,19.0810750907073,13.0918982895173,9.98303221930596,11.8504700718821,3.96513985737078,2.80254281490768,0.526768169550154,2.55722701147983,7.46720449223413,9.25206745497792,2.34061093546949,12.0591238654428,10.8892995318989,9.74133642039557,2.00538822393312,6.18672405697158,4.87374568083967,6.49929273036037,3.20228299314188,3.90178042679635,0.493313713811028,1.10540007114339,1.15921234294021,12.7526444319372,9.36392898313996,10.4535523804977,1.0197840842781,16.4784812248826,8.59068613706575,9.1087089127021,3.18565414324097,2.60433381542567,3.8018081777935,2.10805166708882,2.8157054453972,0,0.947109008176067,1.64225599384209,1.61285394579786,3.7441627409691,3.47578569318718,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,1.14398982156026,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,1.57624608161542,4.74380664690938,3.33691894327346,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,2.06768026122887,1.94142780736755,1.921096040462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,2.02979043692868,1.52927441428475,0.569647187174163,1.66762242820452,0.411362273086194,1.94541993357815,0.540031437238115,3.17250070517708,0,0,0,0,0.144269212976445,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.65770349318689,0,0,0.246169610922139,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0.182454789215666,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0.828478110694391,2.48083010905975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,1.87307838524418,1.30356900021302,0,0,0,0.217716747896961,0,0.336760265072938,0,0,0,0,0,0,2.34640942403454,0,0,0.665756774185513,1.40891655513718,0 | |||
|short_description=p2@MIR150 | |||
}} |
Revision as of 00:30, 21 January 2014
Short description: | p2@MIR150 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MIR150_5end |
Coexpression cluster: | C272_CD19_CD4_CD8_Whole_Peripheral_lymph_tonsil |
Association with transcript: | -233bp_to_NR_029703, uc010yaw.1_5end |
EntrezGene: | MIR150 |
HGNC: | 31537 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.50e-44 | 52 |
lymphocyte | 7.21e-43 | 53 |
common lymphoid progenitor | 7.21e-43 | 53 |
mature alpha-beta T cell | 6.21e-35 | 18 |
alpha-beta T cell | 6.21e-35 | 18 |
immature T cell | 6.21e-35 | 18 |
mature T cell | 6.21e-35 | 18 |
immature alpha-beta T cell | 6.21e-35 | 18 |
B cell | 3.48e-27 | 14 |
T cell | 4.63e-24 | 25 |
pro-T cell | 4.63e-24 | 25 |
nongranular leukocyte | 3.78e-22 | 115 |
leukocyte | 2.87e-21 | 136 |
CD8-positive, alpha-beta T cell | 1.86e-20 | 11 |
CD4-positive, alpha-beta T cell | 5.96e-19 | 6 |
hematopoietic lineage restricted progenitor cell | 9.71e-17 | 120 |
hematopoietic stem cell | 1.94e-15 | 168 |
lymphocyte of B lineage | 9.91e-15 | 24 |
pro-B cell | 9.91e-15 | 24 |
hematopoietic cell | 3.47e-14 | 177 |
hematopoietic oligopotent progenitor cell | 2.43e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.43e-12 | 161 |
naive T cell | 1.38e-10 | 3 |
natural killer cell | 1.26e-09 | 3 |
pro-NK cell | 1.26e-09 | 3 |
single nucleate cell | 2.88e-09 | 3 |
mononuclear cell | 2.88e-09 | 3 |
regulatory T cell | 1.65e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.65e-07 | 2 |
naive regulatory T cell | 1.65e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.94e-11 | 15 |
haemolymphatic fluid | 4.94e-11 | 15 |
organism substance | 4.94e-11 | 15 |
thymus | 2.81e-07 | 4 |
hemolymphoid system gland | 2.81e-07 | 4 |
thymic region | 2.81e-07 | 4 |
pharyngeal gland | 2.81e-07 | 4 |
thymus primordium | 2.81e-07 | 4 |