FFCP PHASE1:Hg19::chr2:55277654..55277685,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57142 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14085 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NQC3 | |||
|association_with_transcript=0bp_to_ENST00000317610,ENST00000337526,ENST00000357732_5end | |||
|description=CAGE_peak_2_at_RTN4_5end | |||
|id=chr2:55277654..55277685,- | |||
|ontology_enrichment_celltype=CL:0000133!6.64e-10!59;CL:0000075!2.50e-08!27;CL:0000055!8.37e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0000075;2.49e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,6.64e-10,59;CL:0000075,2.50e-08,27;CL:0002321,6.37e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.37e-20!94;UBERON:0001016!2.37e-20!94;UBERON:0005743!6.54e-19!86;UBERON:0001017!5.94e-18!82;UBERON:0003075!6.61e-17!86;UBERON:0007284!6.61e-17!86;UBERON:0002346!6.72e-17!90;UBERON:0002616!5.21e-15!59;UBERON:0001049!6.31e-15!57;UBERON:0005068!6.31e-15!57;UBERON:0006241!6.31e-15!57;UBERON:0007135!6.31e-15!57;UBERON:0000924!6.81e-15!173;UBERON:0006601!6.81e-15!173;UBERON:0004121!1.06e-14!169;UBERON:0000955!7.58e-14!69;UBERON:0006238!7.58e-14!69;UBERON:0003056!7.85e-13!61;UBERON:0000119!2.25e-12!312;UBERON:0000483!5.97e-12!309;UBERON:0000033!1.55e-11!123;UBERON:0000922!3.00e-10!612;UBERON:0000025!3.25e-10!194;UBERON:0000153!7.39e-10!129;UBERON:0007811!7.39e-10!129;UBERON:0003080!3.18e-09!42;UBERON:0002050!6.90e-09!605;UBERON:0005423!6.90e-09!605;UBERON:0000923!7.28e-09!604;UBERON:0005291!7.28e-09!604;UBERON:0006598!7.28e-09!604;UBERON:0002532!7.28e-09!604;UBERON:0002780!9.49e-09!41;UBERON:0001890!9.49e-09!41;UBERON:0006240!9.49e-09!41;UBERON:0000468!1.24e-08!659;UBERON:0000477!1.32e-08!286;UBERON:0002020!3.05e-08!34;UBERON:0003528!3.05e-08!34;UBERON:0000475!5.10e-08!365;UBERON:0004111!5.34e-08!241;UBERON:0001893!1.33e-07!34;UBERON:0002791!1.45e-07!33;UBERON:0003076!1.62e-07!15;UBERON:0003057!1.62e-07!15;UBERON:0000481!2.34e-07!347;UBERON:0001869!5.03e-07!32;UBERON:0004732!8.14e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;6.11e-08;53!UBERON:0002616;6.11e-08;53!UBERON:0003528;2.69e-07;34!UBERON:0002020;2.69e-07;34!UBERON:0002791;6.84e-07;32!UBERON:0004732;8.42e-07;13!UBERON:0001893;9.30e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.30e-19,89;UBERON:0003075,1.74e-17,82;UBERON:0007284,1.74e-17,82;UBERON:0002346,1.90e-17,86;UBERON:0001017,1.93e-17,81;UBERON:0004121,9.38e-15,171;UBERON:0000924,9.38e-15,171;UBERON:0006601,9.38e-15,171;UBERON:0001049,2.10e-14,56;UBERON:0005068,2.10e-14,56;UBERON:0006241,2.10e-14,56;UBERON:0007135,2.10e-14,56;UBERON:0010314,1.35e-13,132;UBERON:0000955,2.31e-13,68;UBERON:0006238,2.31e-13,68;UBERON:0000073,3.74e-13,53;UBERON:0002616,3.74e-13,53;UBERON:0003056,7.37e-13,61;UBERON:0000119,2.04e-12,309;UBERON:0010371,2.41e-12,104;UBERON:0000483,5.43e-12,306;UBERON:0000922,5.27e-11,592;UBERON:0000025,1.50e-09,192;UBERON:0002780,9.49e-09,41;UBERON:0001890,9.49e-09,41;UBERON:0003080,9.49e-09,41;UBERON:0006240,9.49e-09,41;UBERON:0005423,1.84e-08,581;UBERON:0011216,2.05e-08,223;UBERON:0003528,3.05e-08,34;UBERON:0002020,3.05e-08,34;UBERON:0000923,4.21e-08,560;UBERON:0010316,4.21e-08,560;UBERON:0005291,4.21e-08,560;UBERON:0006598,4.21e-08,560;UBERON:0010317,4.21e-08,560;UBERON:0002532,4.21e-08,560;UBERON:0004111,1.03e-07,240;UBERON:0001893,1.33e-07,34;UBERON:0002050,1.40e-07,564;UBERON:0003076,1.62e-07,15;UBERON:0003057,1.62e-07,15;UBERON:0002791,2.63e-07,32;UBERON:0001869,5.03e-07,32;UBERON:0004732,8.14e-07,13 | |||
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| |||
|short_description=p2@RTN4 | |||
}} |
Revision as of 03:14, 21 January 2014
Short description: | p2@RTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000317610, ENST00000337526, ENST00000357732_5end |
EntrezGene: | RTN4 |
HGNC: | 14085 |
UniProt: | Q9NQC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 6.64e-10 | 59 |
columnar/cuboidal epithelial cell | 2.50e-08 | 27 |
embryonic cell | 6.37e-07 | 250 |