FFCP PHASE1:Hg19::chr2:162273196..162273210,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10716 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11590 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=354bp_to_ENST00000463544_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_TBR1_5end | |||
|id=chr2:162273196..162273210,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.11e-08!8;CL:0000540!6.29e-07!6;CL:0000031!6.29e-07!6;CL:0000404!6.29e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.35e-09;6!CL:0000404;4.35e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.60e-11,8;CL:0000540,4.48e-09,6;CL:0000031,4.48e-09,6;CL:0000404,4.48e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.33e-10;82!CL:0000031;4.35e-09;6!UBERON:0006238;1.28e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.46e-89!22;UBERON:0001950!6.29e-82!20;UBERON:0000956!1.35e-78!25;UBERON:0000203!1.35e-78!25;UBERON:0001893!8.67e-74!34;UBERON:0001869!1.26e-72!32;UBERON:0002791!6.15e-70!33;UBERON:0002020!2.30e-62!34;UBERON:0003528!2.30e-62!34;UBERON:0002780!1.83e-60!41;UBERON:0001890!1.83e-60!41;UBERON:0006240!1.83e-60!41;UBERON:0003080!6.47e-59!42;UBERON:0005743!6.14e-57!86;UBERON:0001017!1.44e-56!82;UBERON:0000073!6.51e-51!94;UBERON:0001016!6.51e-51!94;UBERON:0000955!7.09e-46!69;UBERON:0006238!7.09e-46!69;UBERON:0003056!2.86e-42!61;UBERON:0001049!4.37e-42!57;UBERON:0005068!4.37e-42!57;UBERON:0006241!4.37e-42!57;UBERON:0007135!4.37e-42!57;UBERON:0002616!1.77e-40!59;UBERON:0003075!3.01e-33!86;UBERON:0007284!3.01e-33!86;UBERON:0002346!1.72e-31!90;UBERON:0007023!4.00e-27!115;UBERON:0000033!7.26e-27!123;UBERON:0000200!7.38e-27!6;UBERON:0001871!1.66e-26!7;UBERON:0000153!2.66e-25!129;UBERON:0007811!2.66e-25!129;UBERON:0004121!3.31e-25!169;UBERON:0000924!1.88e-24!173;UBERON:0006601!1.88e-24!173;UBERON:0002021!2.67e-23!5;UBERON:0001872!5.22e-23!5;UBERON:0000349!1.23e-20!5;UBERON:0002771!2.12e-14!3;UBERON:0001870!6.48e-10!2;UBERON:0001876!2.49e-09!2;UBERON:0002360!2.49e-09!2;UBERON:0000094!2.49e-09!2;UBERON:0007645!2.49e-09!2;UBERON:0000025!3.18e-09!194;UBERON:0001954!3.81e-09!2;UBERON:0003022!3.81e-09!2;UBERON:0002421!3.81e-09!2;UBERON:0002600!3.81e-09!2;UBERON:0000064!2.46e-08!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.19e-100;20!UBERON:0002619;2.58e-91;22!UBERON:0000956;2.53e-80;25!UBERON:0000203;2.53e-80;25!UBERON:0001869;4.66e-68;32!UBERON:0001893;4.21e-63;34!UBERON:0002791;7.01e-61;32!UBERON:0003528;7.33e-57;34!UBERON:0002020;7.33e-57;34!UBERON:0002780;9.60e-41;41!UBERON:0001890;9.60e-41;41!UBERON:0000200;5.53e-36;6!UBERON:0002021;4.80e-31;5!UBERON:0001872;1.43e-30;5!UBERON:0000073;1.02e-25;53!UBERON:0002616;1.02e-25;53!UBERON:0001017;2.95e-24;75!UBERON:0000955;1.42e-22;68!UBERON:0001871;2.62e-21;6!UBERON:0001870;1.27e-18;3!UBERON:0001016;3.23e-18;83!UBERON:0002771;2.88e-13;2!UBERON:0002702;3.67e-13;2!UBERON:0011216;2.54e-08;132!UBERON:0002902;1.06e-07;1!UBERON:0009899;1.06e-07;1!UBERON:0002581;1.58e-07;1!UBERON:0002022;2.03e-07;1!UBERON:0007190;2.84e-07;1!UBERON:0003112;4.21e-07;1!UBERON:0011158;4.21e-07;1!UBERON:0003128;4.21e-07;1!UBERON:0001703;4.21e-07;1!UBERON:0002241;4.21e-07;1!UBERON:0001882;5.84e-07;1!UBERON:0005403;5.84e-07;1!UBERON:0007023;7.07e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.86e-100,20;UBERON:0002619,2.22e-91,22;UBERON:0000956,2.22e-80,25;UBERON:0000203,2.22e-80,25;UBERON:0001869,2.06e-76,32;UBERON:0001893,8.47e-72,34;UBERON:0002791,3.44e-69,32;UBERON:0003528,5.36e-65,34;UBERON:0002020,5.36e-65,34;UBERON:0002780,4.19e-59,41;UBERON:0001890,4.19e-59,41;UBERON:0003080,4.19e-59,41;UBERON:0006240,4.19e-59,41;UBERON:0001017,5.49e-59,81;UBERON:0001016,1.11e-52,89;UBERON:0000955,1.37e-48,68;UBERON:0006238,1.37e-48,68;UBERON:0000073,5.41e-45,53;UBERON:0002616,5.41e-45,53;UBERON:0001049,2.16e-42,56;UBERON:0005068,2.16e-42,56;UBERON:0006241,2.16e-42,56;UBERON:0007135,2.16e-42,56;UBERON:0003056,1.29e-38,61;UBERON:0000200,7.25e-36,6;UBERON:0002021,4.95e-31,5;UBERON:0001872,1.23e-30,5;UBERON:0003075,1.01e-27,82;UBERON:0007284,1.01e-27,82;UBERON:0002346,3.04e-26,86;UBERON:0004121,3.13e-25,171;UBERON:0000924,3.13e-25,171;UBERON:0006601,3.13e-25,171;UBERON:0001871,2.31e-21,6;UBERON:0011216,3.64e-21,223;UBERON:0010371,5.58e-21,104;UBERON:0007023,1.08e-18,114;UBERON:0001870,1.56e-18,3;UBERON:0010314,2.33e-17,132;UBERON:0002771,2.71e-13,2;UBERON:0002702,4.68e-13,2;UBERON:0000025,2.14e-09,192;UBERON:0002902,1.06e-07,1;UBERON:0009899,1.06e-07,1;UBERON:0002581,1.63e-07,1;UBERON:0002022,1.85e-07,1;UBERON:0007190,3.02e-07,1;UBERON:0003112,4.08e-07,1;UBERON:0011158,4.08e-07,1;UBERON:0003128,4.08e-07,1;UBERON:0001703,4.08e-07,1;UBERON:0002241,4.08e-07,1;UBERON:0004761,4.08e-07,1;UBERON:0009617,4.08e-07,1;UBERON:0001882,5.50e-07,1;UBERON:0005403,5.50e-07,1 | |||
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|short_description=p5@TBR1 | |||
}} |
Revision as of 06:17, 21 January 2014
Short description: | p5@TBR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TBR1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 354bp_to_ENST00000463544_5end |
EntrezGene: | TBR1 |
HGNC: | 11590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.60e-11 | 8 |
neuron | 4.48e-09 | 6 |
neuroblast | 4.48e-09 | 6 |
electrically signaling cell | 4.48e-09 | 6 |