FFCP PHASE1:Hg19::chr2:198540751..198540790,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130132 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26402 | |||
|TSSclassifier=strong | |||
|UniProt=C9J6C2 | |||
|association_with_transcript=0bp_to_ENST00000429081_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_RFTN2_5end | |||
|id=chr2:198540751..198540790,- | |||
|ontology_enrichment_celltype=CL:0000055!1.35e-08!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.36e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.33e-39!115;UBERON:0001049!1.54e-37!57;UBERON:0005068!1.54e-37!57;UBERON:0006241!1.54e-37!57;UBERON:0007135!1.54e-37!57;UBERON:0002616!2.89e-37!59;UBERON:0005743!3.30e-35!86;UBERON:0001017!6.41e-35!82;UBERON:0000073!3.13e-33!94;UBERON:0001016!3.13e-33!94;UBERON:0002346!6.42e-32!90;UBERON:0000955!7.75e-32!69;UBERON:0006238!7.75e-32!69;UBERON:0003075!3.04e-31!86;UBERON:0007284!3.04e-31!86;UBERON:0003080!7.17e-28!42;UBERON:0002780!2.80e-27!41;UBERON:0001890!2.80e-27!41;UBERON:0006240!2.80e-27!41;UBERON:0002020!7.66e-25!34;UBERON:0003528!7.66e-25!34;UBERON:0001893!1.04e-24!34;UBERON:0002791!5.07e-24!33;UBERON:0001869!3.91e-23!32;UBERON:0000033!5.49e-23!123;UBERON:0000153!5.74e-23!129;UBERON:0007811!5.74e-23!129;UBERON:0003056!3.82e-22!61;UBERON:0000924!1.22e-21!173;UBERON:0006601!1.22e-21!173;UBERON:0004121!7.70e-21!169;UBERON:0000956!7.19e-18!25;UBERON:0000203!7.19e-18!25;UBERON:0002619!1.13e-17!22;UBERON:0001950!4.09e-16!20;UBERON:0000475!1.45e-14!365;UBERON:0000477!2.04e-13!286;UBERON:0000025!2.34e-12!194;UBERON:0000119!4.76e-12!312;UBERON:0000481!1.92e-11!347;UBERON:0000483!2.09e-11!309;UBERON:0000468!2.40e-11!659;UBERON:0004111!2.53e-11!241;UBERON:0003076!1.27e-10!15;UBERON:0003057!1.27e-10!15;UBERON:0004732!5.26e-09!13;UBERON:0000064!1.48e-08!219;UBERON:0002308!1.87e-08!9;UBERON:0000125!1.87e-08!9;UBERON:0002420!2.07e-08!9;UBERON:0007245!2.07e-08!9;UBERON:0010009!2.07e-08!9;UBERON:0010011!2.07e-08!9;UBERON:0000454!2.07e-08!9;UBERON:0004733!2.92e-08!12;UBERON:0002028!2.92e-08!12;UBERON:0007277!2.92e-08!12;UBERON:0002298!1.81e-07!8;UBERON:0001871!3.80e-07!7;UBERON:0009663!6.49e-07!7;UBERON:0000922!7.25e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.09e-25;34!UBERON:0002020;1.09e-25;34!UBERON:0001893;1.29e-25;34!UBERON:0002791;2.14e-25;32!UBERON:0001869;3.00e-25;32!UBERON:0002780;2.39e-24;41!UBERON:0001890;2.39e-24;41!UBERON:0000073;7.80e-24;53!UBERON:0002616;7.80e-24;53!UBERON:0002619;4.81e-22;22!UBERON:0000956;2.65e-21;25!UBERON:0000203;2.65e-21;25!UBERON:0001950;4.71e-20;20!UBERON:0001017;1.28e-17;75!UBERON:0000955;2.96e-17;68!UBERON:0001016;8.76e-15;83!UBERON:0007023;8.18e-12;114!UBERON:0000125;2.39e-10;9!UBERON:0002308;2.39e-10;9!UBERON:0002420;2.75e-10;9!UBERON:0007245;2.75e-10;9!UBERON:0010009;2.75e-10;9!UBERON:0010011;2.75e-10;9!UBERON:0000454;2.75e-10;9!UBERON:0004732;5.25e-10;13!UBERON:0004733;4.49e-09;12!UBERON:0002028;4.49e-09;12!UBERON:0011216;9.76e-09;132!UBERON:0009663;2.17e-08;7!UBERON:0001871;1.16e-07;6!UBERON:0002298;2.28e-07;6!UBERON:0000200;4.65e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.02e-44,56;UBERON:0005068,1.02e-44,56;UBERON:0006241,1.02e-44,56;UBERON:0007135,1.02e-44,56;UBERON:0000073,1.64e-41,53;UBERON:0002616,1.64e-41,53;UBERON:0007023,1.68e-41,114;UBERON:0001017,2.84e-40,81;UBERON:0000955,1.03e-38,68;UBERON:0006238,1.03e-38,68;UBERON:0001016,2.28e-37,89;UBERON:0002346,3.97e-36,86;UBERON:0003075,4.66e-35,82;UBERON:0007284,4.66e-35,82;UBERON:0002780,1.30e-33,41;UBERON:0001890,1.30e-33,41;UBERON:0003080,1.30e-33,41;UBERON:0006240,1.30e-33,41;UBERON:0003528,3.38e-30,34;UBERON:0002020,3.38e-30,34;UBERON:0001893,4.95e-30,34;UBERON:0002791,3.40e-28,32;UBERON:0001869,4.96e-28,32;UBERON:0010371,5.99e-26,104;UBERON:0004121,8.80e-25,171;UBERON:0000924,8.80e-25,171;UBERON:0006601,8.80e-25,171;UBERON:0010314,9.11e-25,132;UBERON:0003056,1.88e-22,61;UBERON:0002619,4.62e-22,22;UBERON:0000956,2.40e-21,25;UBERON:0000203,2.40e-21,25;UBERON:0001950,4.49e-20,20;UBERON:0011216,4.95e-20,223;UBERON:0003076,5.99e-12,15;UBERON:0003057,5.99e-12,15;UBERON:0000125,2.50e-10,9;UBERON:0002308,2.50e-10,9;UBERON:0002420,2.82e-10,9;UBERON:0007245,2.82e-10,9;UBERON:0010009,2.82e-10,9;UBERON:0010011,2.82e-10,9;UBERON:0000454,2.82e-10,9;UBERON:0004732,6.26e-10,13;UBERON:0004733,5.32e-09,12;UBERON:0002028,5.32e-09,12;UBERON:0007277,5.32e-09,12;UBERON:0000025,1.62e-08,192;UBERON:0009663,2.24e-08,7;UBERON:0004111,4.71e-08,240;UBERON:0001871,1.06e-07,6;UBERON:0002298,2.31e-07,6;UBERON:0000200,4.62e-07,6;UBERON:0000479,6.25e-07,773 | |||
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| |||
|short_description=p2@RFTN2 | |||
}} |
Revision as of 07:46, 21 January 2014
Short description: | p2@RFTN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RFTN2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000429081_5end |
EntrezGene: | RFTN2 |
HGNC: | 26402 |
UniProt: | C9J6C2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data