FFCP PHASE1:Hg19::chr2:231280954..231280965,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6672 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11206 | |||
|TSSclassifier=strong | |||
|UniProt=E9PHV6 | |||
|association_with_transcript=0bp_to_ENST00000409341,ENST00000409824_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_SP100_5end | |||
|id=chr2:231280954..231280965,+ | |||
|ontology_enrichment_celltype=CL:0000738!9.58e-24!140;CL:0002087!3.55e-23!119;CL:0002057!1.70e-22!42;CL:0002031!1.79e-21!124;CL:0000860!1.02e-19!45;CL:0000037!1.20e-18!172;CL:0000566!1.20e-18!172;CL:0002032!2.34e-18!165;CL:0000837!2.34e-18!165;CL:0000988!3.41e-17!182;CL:0000766!3.68e-16!76;CL:0000048!1.38e-15!430;CL:0000723!7.98e-15!436;CL:0002009!1.37e-13!65;CL:0002194!1.45e-13!63;CL:0000576!1.45e-13!63;CL:0000040!1.45e-13!63;CL:0000559!1.45e-13!63;CL:0000034!2.32e-13!444;CL:0000557!2.54e-13!71;CL:0000839!9.51e-13!70;CL:0000134!4.56e-12!358;CL:0002320!3.77e-11!365;CL:0000763!6.95e-10!112;CL:0000049!6.95e-10!112;CL:0002139!1.87e-09!24;CL:0000542!4.92e-09!53;CL:0000051!4.92e-09!53;CL:0000838!4.93e-09!52;CL:0000222!1.99e-08!119;CL:0000945!2.22e-08!24;CL:0000826!2.22e-08!24;CL:0002371!1.80e-07!591;CL:0000115!1.86e-07!35;CL:0000219!2.08e-07!390;CL:0000213!2.28e-07!57;CL:0000215!2.28e-07!57;CL:0000359!7.09e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.27e-23;33!CL:0002057;3.27e-23;33!CL:0000473;1.45e-16;39!CL:0000234;1.45e-16;39!CL:0000576;2.03e-14;48!CL:0000766;5.06e-11;69!CL:0002139;1.19e-10;24!CL:0002087;2.99e-10;104!CL:0000945;4.86e-09;24!CL:0000115;1.33e-07;36!CL:0000359;1.94e-07;32!CL:0000236;2.78e-07;13!CL:0000738;6.24e-07;136!CL:0000071;6.63e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.81e-28,136;CL:0002087,7.56e-28,115;CL:0000860,4.40e-27,42;CL:0002057,4.40e-27,42;CL:0002031,8.97e-25,120;CL:0000473,6.93e-24,48;CL:0000234,6.93e-24,48;CL:0000037,2.64e-20,168;CL:0000766,3.95e-20,72;CL:0002032,4.48e-20,161;CL:0000837,4.48e-20,161;CL:0000988,1.86e-18,177;CL:0002194,3.11e-17,59;CL:0000576,3.11e-17,59;CL:0000040,3.11e-17,59;CL:0000559,3.11e-17,59;CL:0002009,9.40e-17,61;CL:0000557,4.08e-16,67;CL:0000839,1.50e-15,66;CL:0000048,4.42e-14,427;CL:0000723,1.74e-13,433;CL:0000034,7.63e-13,441;CL:0002139,5.62e-11,24;CL:0000134,7.33e-11,354;CL:0000763,1.12e-10,108;CL:0000049,1.12e-10,108;CL:0002320,5.69e-10,361;CL:0000542,7.23e-10,53;CL:0000051,7.23e-10,53;CL:0000838,7.37e-10,52;CL:0000945,2.66e-09,24;CL:0000826,2.66e-09,24;CL:0000115,7.01e-09,36;CL:0000213,7.59e-09,58;CL:0000215,7.59e-09,58;CL:0000222,4.66e-08,121;CL:0000236,1.19e-07,14;CL:0000359,1.95e-07,32;CL:0000071,3.10e-07,18;CL:0002546,3.10e-07,18;CL:0002078,6.50e-07,45;CL:0000219,9.47e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;4.83e-20;42!CL:0002546;6.63e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!6.32e-21!216;UBERON:0004535!1.72e-16!110;UBERON:0002193!3.78e-16!112;UBERON:0001009!1.19e-15!113;UBERON:0000055!1.59e-15!69;UBERON:0004872!6.64e-15!84;UBERON:0001981!1.75e-14!60;UBERON:0007500!1.75e-14!60;UBERON:0004537!1.75e-14!60;UBERON:0006965!1.75e-14!60;UBERON:0002390!4.52e-14!102;UBERON:0003061!4.52e-14!102;UBERON:0001637!1.60e-12!42;UBERON:0003509!1.60e-12!42;UBERON:0004572!1.60e-12!42;UBERON:0002049!1.79e-12!79;UBERON:0007798!1.79e-12!79;UBERON:0002371!1.38e-10!80;UBERON:0002384!1.77e-10!375;UBERON:0002204!9.55e-10!167;UBERON:0004573!1.23e-09!33;UBERON:0004571!1.23e-09!33;UBERON:0002405!2.38e-09!115;UBERON:0001474!1.62e-08!86;UBERON:0004765!1.05e-07!101;UBERON:0001434!1.05e-07!101;UBERON:0000947!8.23e-07!21;UBERON:0010191!8.23e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.98e-11;42!UBERON:0003509;5.98e-11;42!UBERON:0004572;5.98e-11;42!UBERON:0004573;7.06e-10;33!UBERON:0004571;7.06e-10;33!UBERON:0000055;1.05e-09;65!UBERON:0007500;1.66e-09;56!UBERON:0001981;1.66e-09;56!UBERON:0004537;1.66e-09;56!UBERON:0000947;1.12e-07;21!UBERON:0010191;1.12e-07;21!UBERON:0004638;6.63e-07;18!UBERON:0001986;6.63e-07;18!UBERON:0004852;6.63e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,9.65e-29,203;UBERON:0002193,6.24e-20,108;UBERON:0000055,1.65e-18,68;UBERON:0004535,3.31e-17,109;UBERON:0002405,7.32e-17,93;UBERON:0002390,8.24e-17,98;UBERON:0003061,8.24e-17,98;UBERON:0007500,8.43e-17,59;UBERON:0001981,8.43e-17,59;UBERON:0004537,8.43e-17,59;UBERON:0006965,8.43e-17,59;UBERON:0004872,2.80e-16,83;UBERON:0001009,5.80e-16,112;UBERON:0001637,3.64e-14,42;UBERON:0003509,3.64e-14,42;UBERON:0004572,3.64e-14,42;UBERON:0002049,4.89e-14,78;UBERON:0007798,4.89e-14,78;UBERON:0000926,3.38e-13,315;UBERON:0004120,3.38e-13,315;UBERON:0006603,3.38e-13,315;UBERON:0002371,5.11e-13,76;UBERON:0004573,1.12e-10,33;UBERON:0004571,1.12e-10,33;UBERON:0001474,1.28e-10,82;UBERON:0002384,7.48e-10,371;UBERON:0004765,8.51e-10,90;UBERON:0001434,2.92e-08,100;UBERON:0002204,3.59e-08,167;UBERON:0003914,7.51e-08,117;UBERON:0000947,9.04e-08,21;UBERON:0010191,9.04e-08,21;UBERON:0004638,3.10e-07,18;UBERON:0001986,3.10e-07,18;UBERON:0004852,3.10e-07,18 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.422863212287913,0,0,1.74467704820074,0,2.52687949370732,0,0.245733936501509,0,0.655324116390517,0,1.23766352960047,0.331397375727916,4.70627602516243,2.41077811209591,2.19093027116212,4.87932798790507,0.369363174230364,0.612002073732759,0,0.286235987131057,0,0.376627918784408,3.82067028739756,2.8735206307481,4.171671409625,1.96682138424452,3.83829398097213,3.40595471295367,0,0,0,1.47187681102573,0.568676929949686,0.880801318004542,1.10799081706375,2.00544447470142,3.03815219002193,1.34349284543955,0.971680998056939,0.515151135268373,12.0680538187039,15.87078963493,16.4957161607715,13.4808841405297,11.5127008646111,18.5823822537062,27.0430848782821,19.9805351092698,31.6886188050704,6.55016793399575,7.10033151942209,6.77132432971709,14.6829024843232,17.4659936037021,19.3262196622773,22.3441241430759,15.7255223267286,17.9014395223732,20.7806319117631,24.3345662298391,32.3930810404848,22.9265298516581,17.5889419654253,20.553134216854,22.1098825425934,19.2948679815475,33.447082084588,22.3997815974346,19.5187147073409,22.7852918957437,2.74631872205524,2.12604299965044,2.51590374610051,2.02191536063691,1.95229960693958,1.6072558669708,1.71007646244749,2.38700012638908,1.82664153764634,8.79981222306614,14.7457425040775,11.5636203002262,14.0820973446947,10.0098996759003,7.47178171940828,12.5598525829124,15.2648600725658,12.5226853204079,4.69789751496751,10.3213771593812,0,4.48406850385229,1.05353633910031,1.37696839079683,1.57204305099666,1.23360899399706,2.67498392625085,1.62961133316795,0.473447805734733,3.89653456815823,1.78256731016278,1.17842362989935,0.886135578334485,3.24964636518019,1.66518715643378,1.8208308658383,2.63100647365882,1.65810010671509,1.73881851441031,0.889719378972363,1.07016331235885,0,1.24640276967323,0,2.40539211837841,1.01207876807801,1.91139248594458,1.95325036156926,0.950452044448374,1.50575119077773,1.4078527226986,3.74792179657038,1.4206635122641,1.64225599384209,3.22570789159572,1.33720097891754,1.88271725047639,2.43806866313962,0.670700859703636,0.639312809217652,0.361439152384566,1.00267582127178,0.144846518960824,2.3858578411533,0.973269740605272,0.283604451492204,0.443458794925128,0.702678285545008,0.458426764241994,0.364295288292542,0,0.649094787309367,0.348259474598534,0.26591592103773,0.476981248610684,1.71598473234038,0.371457501329565,4.96906018416763,2.58070378531837,1.73570250803797,3.39184765154406,1.67799774483962,3.57653454522088,5.01587919688345,4.65150166504792,8.18262404179434,6.02497102976406,3.22263453687318,3.04108842287405,0.976248230192678,5.14728312484216,6.48113558305408,3.30408994651095,3.81699933464489,3.94140181691628,4.5994991239765,0,1.83201743930407,3.9534125230819,3.87780264148325,0.436094052142534,1.49091585508596,5.44511200157693,5.82600395578163,2.86836620748814,1.41867352879343,0.560677600142307,2.1349799145941,1.97334038733728,0.311211035399766,4.04132016209064,2.7788523529288,0.302714855289863,0.576175924479999,0.468642863667593,1.24864030732128,0.570471821544449,1.34503812496621,1.29177948508141,0.647491777472526,0.140450806702248,1.22492502752936,0.491337269247072,0.826606249406124,2.37600571456411,0.989067717114227,0,0,1.34668891163253,0.375355559615893,1.6623846929051,0.438977620880838,0.612975591598039,0.751190294532984,3.74326204428069,0.89694817844431,0.85422955527427,0.635795703478686,0.600182192168805,0.412210116953756,1.54584324027377,0.930584281657949,0.337552664482532,0.292311015483596,0.252433774244115,0.184099797284599,1.13152239773168,0,0.705264687593482,0.339121184620975,0.773043412653187,2.18196896472668,2.00763216772303,0,0,0,0,0,0,0,0,0,0.928735856063958,1.44375896333917,0.591534000199219,0,0.482022059766964,0.220587945464788,0.435758888184812,0.474541238222193,0.269662616320329,0.588664395376038,0.38474715694639,1.4763109092493,2.80483547606892,0,1.47008711385542,0,0,0.590789906681404,0,0.245976877086227,0.686271241194102,0.548751427043128,0,3.21692711717219,0.740707561268237,0.977424915930974,0,1.44331342025273,0.115930404975077,1.76113041353732,10.3943842387973,6.48179717607255,5.13686211033415,0,0,1.72351904261178,0,0.743155811443641,0,5.03946384596579,3.68615252830205,0.53735113621709,0.871901815541886,0.383382679165211,2.95597942737566,2.3773077183571,0.414656231081544,0.288239906833923,0.50496973370552,0.825472625798197,0.381988425558278,1.17217447210047,0,0.205654985406647,0.600686115687835,0.857479297891735,0.448524337381443,0.43596006883328,1.3200891447771,1.80980402060889,0,0,1.86156681609409,0,0,0,0.266422179016099,0.285955987316295,0,0.823240336780769,1.30294473717494,0.355391948742546,0.791951872933429,4.22015127883421,3.48613383440118,4.39881161201051,1.2162378064119,1.50677127429638,0,1.4377491329495,1.14861935834114,0,2.31650090668127,0.821905290201534,0.716243852959582,2.91421374383171,2.75843064282698,2.15627574859517,2.31017465303547,0,0,0,0,0,5.24304916763028,2.99161459204025,9.11714129559278,0.24538298343828,0.500170521059677,0.813795071099207,1.2478251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| |||
|short_description=p2@SP100 | |||
}} |
Revision as of 09:06, 21 January 2014
Short description: | p2@SP100 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SP100_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000409341, ENST00000409824_5end |
EntrezGene: | SP100 |
HGNC: | 11206 |
UniProt: | E9PHV6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 9.65e-29 | 203 |
hemolymphoid system | 6.24e-20 | 108 |
vessel | 1.65e-18 | 68 |
cardiovascular system | 3.31e-17 | 109 |
immune system | 7.32e-17 | 93 |
hematopoietic system | 8.24e-17 | 98 |
blood island | 8.24e-17 | 98 |
epithelial tube open at both ends | 8.43e-17 | 59 |
blood vessel | 8.43e-17 | 59 |
blood vasculature | 8.43e-17 | 59 |
vascular cord | 8.43e-17 | 59 |
splanchnic layer of lateral plate mesoderm | 2.80e-16 | 83 |
circulatory system | 5.80e-16 | 112 |
artery | 3.64e-14 | 42 |
arterial blood vessel | 3.64e-14 | 42 |
arterial system | 3.64e-14 | 42 |
vasculature | 4.89e-14 | 78 |
vascular system | 4.89e-14 | 78 |
mesoderm | 3.38e-13 | 315 |
mesoderm-derived structure | 3.38e-13 | 315 |
presumptive mesoderm | 3.38e-13 | 315 |
bone marrow | 5.11e-13 | 76 |
systemic artery | 1.12e-10 | 33 |
systemic arterial system | 1.12e-10 | 33 |
bone element | 1.28e-10 | 82 |
connective tissue | 7.48e-10 | 371 |
skeletal element | 8.51e-10 | 90 |
skeletal system | 2.92e-08 | 100 |
musculoskeletal system | 3.59e-08 | 167 |
epithelial tube | 7.51e-08 | 117 |
aorta | 9.04e-08 | 21 |
aortic system | 9.04e-08 | 21 |
blood vessel endothelium | 3.10e-07 | 18 |
endothelium | 3.10e-07 | 18 |
cardiovascular system endothelium | 3.10e-07 | 18 |