FFCP PHASE1:Hg19::chr2:238395042..238395061,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79083 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29643 | |||
|TSSclassifier=strong | |||
|UniProt=G5E9G5,C9JI01 | |||
|association_with_transcript=0bp_to_ENST00000410032,ENST00000429898,uc002vws.2_5end | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_2_at_MLPH_5end | |||
|id=chr2:238395042..238395061,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.61e-10!180;CL:0000148!8.15e-08!10;CL:0000541!8.15e-08!10;CL:0000075!7.18e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000148;5.65e-26;10!CL:0000710;3.77e-20;20!CL:0000147;2.76e-18;14!CL:0002567;1.79e-17;3!CL:0000075;1.62e-14;27!CL:0002554;6.09e-11;2!CL:0002077;4.67e-10;34!CL:0002603;3.30e-08;3!CL:0000064;1.41e-07;3!CL:0000067;1.41e-07;3!CL:0005012;1.41e-07;3!CL:0002304;1.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.90e-26,10;CL:0000541,4.90e-26,10;CL:0000710,2.80e-20,20;CL:0000147,2.49e-18,14;CL:0002567,1.79e-17,3;CL:0000075,1.31e-14,27;CL:0002077,2.83e-11,34;CL:0002554,3.46e-11,2;CL:0000333,1.02e-08,41;CL:0000133,1.63e-08,59;CL:0002603,3.55e-08,3;CL:0000064,1.04e-07,3;CL:0000067,1.04e-07,3;CL:0005012,1.04e-07,3;CL:0002304,1.04e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.29e-12;4!DOID:1612;1.29e-12;4!DOID:1909;2.22e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.43e-12,4;DOID:1612,1.43e-12,4;DOID:1909,1.67e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0002200!1.27e-11!11;UBERON:0006876!1.27e-11!11;UBERON:0002203!1.35e-08!6;UBERON:0001768!1.35e-08!6;UBERON:0000475!8.17e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.41e-07;3!UBERON:0001775;1.41e-07;3!UBERON:0004913;6.58e-07;1!UBERON:0003703;6.58e-07;1!UBERON:0001174;6.58e-07;1!UBERON:0004914;6.58e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.04e-07,3;UBERON:0001775,1.04e-07,3;UBERON:0004913,6.23e-07,1;UBERON:0003703,6.23e-07,1;UBERON:0001174,6.23e-07,1;UBERON:0004914,6.23e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.436882744260345,0,0.123766352960047,0,0,0,0,0,3.32426856807327,4.28401451612931,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41802225746102,1.77383517970051,0.702678285545008,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,2.71334303258876,0,0.67355336034844,0,0.454072282934794,0,0.468642863667593,0,0,0,0,0,0.280901613404497,1.02077085627447,0.859840221182376,0.103325781175765,0,0,1.82032272387605,1.43723628363248,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0.587043471179108,0.144366447761074,0,0,6.3216351836742,4.29243081047436,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0,2.85740524314761,6.49380323449072,12.8939191931052,10.2643467613623,4.8328921570562,2.40274446275134,5.71652865261156,0.784917590417525,0.87192013766656,0.5867062865676,0,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0.977208552881205,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,2.4657158706046,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,1.32845119707087,0.737476674166813,0,2.93701736194111,0,0,0,0,0,0,0,0.248107807818777,0,0,0.256278298511402,0,0.160853921143607,0,0.308419387605311,0,0.164254312027618,0,0.116210378459959,0,0,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.462145851343933,0,0.689182862422653,0.429680979473094,0.290033387828457,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0.869932992075073,0,0,1.48863347743867,0.316379424718726,0.38126038784765,0,0,0,0,0,0.274537029736055,0.353437207037059,0.202182481573316,1.58510321173008,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0.35667105148125,0.354761064070598,0,0,0.379473173765715,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27308917445131,0,0.296964680832639,0,0,0,0.556543525114529,0,0,0,0,0,0,0,0,0.269605053441981,0.179021174675609,0,0,0,1.11136990144637,0,0,0,1.30213880542617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21390189767046,0.394584402849391,0,0,0.063186579628488,0,0,1.32930774541437,0.661983911750998,0.941798755221676,1.19472429772959,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0.105600336519406,0.537862017998534,0,0,0,0,0,0.864221491201268,0.326587360109409,0,0,0,0.226624183040251,0,0,0,0,2.22412889249628,0,1.60181118851542,0.157204305099666,1.24271716604159,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,1.51649117541648,3.99651466962954,0,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0710797781803,0,0,0,0,0,0,6.94923605220113,0,0,0,0,0,1.09651553371436,0,0,0,0.535701835878287,0,0,0,0,0,0,0,0,0,0.778619813244484,0.078493092850514,0,0,0.913158720509496,0,0,3.9312099297161,0,0,0,0,2.27937780579341,0.51215543128185,0,0,0,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0,0,0.917458566809082,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318235791390825,0,0.217716747896961,0,0,0.215166616178029,0,0,0,0,0.179650404213174,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p2@MLPH | |||
}} |
Revision as of 09:26, 21 January 2014
Short description: | p2@MLPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MLPH_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 0bp_to_ENST00000410032, ENST00000429898, uc002vws.2_5end |
EntrezGene: | MLPH |
HGNC: | 29643 |
UniProt: | G5E9G5C9JI01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.90e-26 | 10 |
melanoblast | 4.90e-26 | 10 |
neurecto-epithelial cell | 2.80e-20 | 20 |
pigment cell | 2.49e-18 | 14 |
light melanocyte | 1.79e-17 | 3 |
columnar/cuboidal epithelial cell | 1.31e-14 | 27 |
ecto-epithelial cell | 2.83e-11 | 34 |
fibroblast of lymphatic vessel | 3.46e-11 | 2 |
migratory neural crest cell | 1.02e-08 | 41 |
neurectodermal cell | 1.63e-08 | 59 |
astrocyte of the cerebellum | 3.55e-08 | 3 |
ciliated cell | 1.04e-07 | 3 |
ciliated epithelial cell | 1.04e-07 | 3 |
multi-ciliated epithelial cell | 1.04e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.04e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.04e-07 | 3 |
ciliary body | 1.04e-07 | 3 |
hepatopancreatic ampulla | 6.23e-07 | 1 |
extrahepatic bile duct | 6.23e-07 | 1 |
common bile duct | 6.23e-07 | 1 |
duodenal papilla | 6.23e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.43e-12 | 4 |
breast cancer | 1.43e-12 | 4 |
melanoma | 1.67e-11 | 2 |