FFCP PHASE1:Hg19::chr22:31003261..31003302,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6948 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11653 | |||
|TSSclassifier=strong | |||
|UniProt=Q96FD4 | |||
|association_with_transcript=70bp_to_ENST00000407817_5end | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_2_at_TCN2_5end | |||
|id=chr22:31003261..31003302,+ | |||
|ontology_enrichment_celltype=CL:0000115!1.17e-20!35;CL:0002057!1.55e-17!42;CL:0002078!1.21e-15!44;CL:0002139!6.74e-15!24;CL:0000860!1.54e-14!45;CL:0000557!1.95e-14!71;CL:0002009!9.85e-14!65;CL:0000839!3.21e-13!70;CL:0002194!3.57e-13!63;CL:0000576!3.57e-13!63;CL:0000040!3.57e-13!63;CL:0000559!3.57e-13!63;CL:0000766!5.25e-13!76;CL:0000071!1.09e-11!18;CL:0002546!1.09e-11!18;CL:0000213!2.44e-09!57;CL:0000215!2.44e-09!57;CL:1000497!1.63e-08!18;CL:0002518!1.63e-08!18;CL:1000449!2.23e-07!16;CL:1000413!9.00e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.78e-20;36!CL:0000860;5.77e-17;33!CL:0002057;5.77e-17;33!CL:0002139;8.04e-17;24!CL:0000473;2.10e-15;39!CL:0000234;2.10e-15;39!CL:0000071;3.82e-13;18!CL:0000576;7.60e-13;48!CL:0002078;3.50e-12;45!CL:1000497;3.74e-09;17!CL:0002518;3.74e-09;17!CL:0000766;3.87e-09;69!CL:0000213;6.36e-08;58!CL:0000215;6.36e-08;58!CL:1000449;7.31e-08;15!CL:1000413;1.62e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.56e-24,36;CL:0000473,5.90e-21,48;CL:0000234,5.90e-21,48;CL:0000860,2.54e-19,42;CL:0002057,2.54e-19,42;CL:0002078,1.61e-18,45;CL:0000557,8.38e-18,67;CL:0002009,7.81e-17,61;CL:0002139,9.13e-17,24;CL:0000839,1.58e-16,66;CL:0002194,3.50e-16,59;CL:0000576,3.50e-16,59;CL:0000040,3.50e-16,59;CL:0000559,3.50e-16,59;CL:0000766,3.94e-16,72;CL:0000071,4.15e-13,18;CL:0002546,4.15e-13,18;CL:0000213,7.26e-12,58;CL:0000215,7.26e-12,58;CL:1000497,3.20e-09,17;CL:0002518,3.20e-09,17;CL:1000449,6.34e-08,15;CL:1000413,1.66e-07,9;CL:0002681,8.12e-07,12;CL:0002584,8.12e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002057;2.58e-14;42!CL:0002546;3.82e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.49e-18!216;UBERON:0000480!2.45e-17!626;UBERON:0000467!3.51e-17!625;UBERON:0000468!5.29e-17!659;UBERON:0002405!5.76e-16!115;UBERON:0000922!4.08e-15!612;UBERON:0002050!2.03e-14!605;UBERON:0005423!2.03e-14!605;UBERON:0000923!2.86e-14!604;UBERON:0005291!2.86e-14!604;UBERON:0006598!2.86e-14!604;UBERON:0002532!2.86e-14!604;UBERON:0000025!5.35e-14!194;UBERON:0000062!1.23e-13!511;UBERON:0004111!1.71e-13!241;UBERON:0000119!1.39e-12!312;UBERON:0000477!1.87e-12!286;UBERON:0002371!1.97e-12!80;UBERON:0002049!7.50e-12!79;UBERON:0007798!7.50e-12!79;UBERON:0001986!1.09e-11!18;UBERON:0004638!1.09e-11!18;UBERON:0004852!1.09e-11!18;UBERON:0002193!1.11e-11!112;UBERON:0000483!1.47e-11!309;UBERON:0001009!5.16e-11!113;UBERON:0001474!1.53e-10!86;UBERON:0007023!2.38e-10!115;UBERON:0004535!3.86e-10!110;UBERON:0003914!4.18e-10!118;UBERON:0000487!2.42e-09!22;UBERON:0000926!4.39e-09!448;UBERON:0004120!4.39e-09!448;UBERON:0006603!4.39e-09!448;UBERON:0000479!4.41e-09!787;UBERON:0003075!5.19e-09!86;UBERON:0007284!5.19e-09!86;UBERON:0002616!1.14e-08!59;UBERON:0002390!1.89e-08!102;UBERON:0003061!1.89e-08!102;UBERON:0004765!2.79e-08!101;UBERON:0001434!2.79e-08!101;UBERON:0000955!5.36e-08!69;UBERON:0006238!5.36e-08!69;UBERON:0003103!6.56e-08!69;UBERON:0000055!8.59e-08!69;UBERON:0002346!9.93e-08!90;UBERON:0006555!1.12e-07!17;UBERON:0005103!1.12e-07!17;UBERON:0000083!1.12e-07!17;UBERON:0009201!1.12e-07!17;UBERON:0004819!1.12e-07!17;UBERON:0006553!1.12e-07!17;UBERON:0003074!1.12e-07!17;UBERON:0003060!1.12e-07!17;UBERON:0004876!1.21e-07!20;UBERON:0000080!1.73e-07!18;UBERON:0002120!1.73e-07!18;UBERON:0004875!1.73e-07!18;UBERON:0005721!1.73e-07!18;UBERON:0005754!1.73e-07!18;UBERON:0007297!1.73e-07!18;UBERON:0004211!2.23e-07!16;UBERON:0001285!2.23e-07!16;UBERON:0007684!2.23e-07!16;UBERON:0003220!2.23e-07!16;UBERON:0004208!2.23e-07!16;UBERON:0003887!2.42e-07!21;UBERON:0002204!2.87e-07!167;UBERON:0006914!3.06e-07!25;UBERON:0001049!3.20e-07!57;UBERON:0005068!3.20e-07!57;UBERON:0006241!3.20e-07!57;UBERON:0007135!3.20e-07!57;UBERON:0002200!6.18e-07!11;UBERON:0006876!6.18e-07!11;UBERON:0000489!8.84e-07!32;UBERON:0003915!9.00e-07!9;UBERON:0004700!9.00e-07!9;UBERON:0001917!9.00e-07!9;UBERON:0003056!9.91e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.82e-13;18!UBERON:0001986;3.82e-13;18!UBERON:0004852;3.82e-13;18!UBERON:0000487;2.01e-10;22!UBERON:0000490;2.23e-08;33!UBERON:0006914;4.79e-08;25!UBERON:0006555;7.31e-08;15!UBERON:0004819;7.31e-08;15!UBERON:0001285;7.31e-08;15!UBERON:0007684;7.31e-08;15!UBERON:0006876;1.16e-07;11!UBERON:0003915;1.62e-07;9!UBERON:0004700;1.62e-07;9!UBERON:0001917;1.62e-07;9!UBERON:0000353;4.21e-07;15!UBERON:0000489;9.58e-07;29!UBERON:0002465;9.73e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,5.00e-19,93;UBERON:0003081,2.11e-18,203;UBERON:0002371,1.96e-15,76;UBERON:0000926,1.97e-15,315;UBERON:0004120,1.97e-15,315;UBERON:0006603,1.97e-15,315;UBERON:0002193,4.96e-15,108;UBERON:0005423,6.80e-15,581;UBERON:0000922,1.50e-14,592;UBERON:0001474,2.31e-13,82;UBERON:0004765,2.50e-13,90;UBERON:0004638,4.15e-13,18;UBERON:0001986,4.15e-13,18;UBERON:0004852,4.15e-13,18;UBERON:0000025,1.62e-12,192;UBERON:0000923,2.20e-12,560;UBERON:0010316,2.20e-12,560;UBERON:0005291,2.20e-12,560;UBERON:0006598,2.20e-12,560;UBERON:0010317,2.20e-12,560;UBERON:0002532,2.20e-12,560;UBERON:0002050,5.44e-12,564;UBERON:0002049,8.48e-12,78;UBERON:0007798,8.48e-12,78;UBERON:0001009,2.10e-11,112;UBERON:0004111,3.87e-11,240;UBERON:0002390,4.62e-11,98;UBERON:0003061,4.62e-11,98;UBERON:0001434,9.16e-11,100;UBERON:0007023,1.28e-10,114;UBERON:0000119,1.71e-10,309;UBERON:0000487,1.79e-10,22;UBERON:0004535,1.94e-10,109;UBERON:0003914,2.66e-10,117;UBERON:0000483,1.67e-09,306;UBERON:0000479,2.54e-09,773;UBERON:0006555,2.90e-08,16;UBERON:0004819,2.90e-08,16;UBERON:0003103,3.20e-08,68;UBERON:0003075,3.28e-08,82;UBERON:0007284,3.28e-08,82;UBERON:0006914,4.34e-08,25;UBERON:0004211,6.34e-08,15;UBERON:0009773,6.34e-08,15;UBERON:0001231,6.34e-08,15;UBERON:0001285,6.34e-08,15;UBERON:0007684,6.34e-08,15;UBERON:0004208,6.34e-08,15;UBERON:0006876,1.08e-07,11;UBERON:0003915,1.66e-07,9;UBERON:0004700,1.66e-07,9;UBERON:0001917,1.66e-07,9;UBERON:0000055,2.02e-07,68;UBERON:0002204,3.07e-07,167;UBERON:0000353,3.43e-07,15;UBERON:0000489,4.28e-07,31;UBERON:0002346,5.06e-07,86;UBERON:0005172,5.56e-07,54;UBERON:0005173,5.56e-07,54;UBERON:0002113,6.41e-07,26;UBERON:0003918,6.41e-07,26;UBERON:0011143,6.41e-07,26;UBERON:0005095,6.41e-07,26;UBERON:0007687,6.41e-07,26;UBERON:0001225,8.12e-07,12;UBERON:0008987,8.12e-07,12 | |||
|phase1_expression=0.54503513781167,2.35510576280081,0.422863212287913,0,0,0.872338524100369,0,0,0.261185628199839,1.47440361900905,3.48900583986214,0.655324116390517,2.37390280405608,2.72285976512103,2.98257638155124,0.672325146451775,0.602694528023977,0,0,8.00286877499121,15.5040525345632,6.26909442956176,0.85870796139317,1.50561867580173,0.502170558379211,4.58480434487708,4.02292888304734,6.29686250509434,3.54027849164014,3.0706351847777,5.72819656269481,0,0,0.369754010166788,0,0,0,8.86392653651004,5.01361118675354,9.76548918221333,144.425480884751,135.063658729914,92.9847799159413,23.8453111598486,13.9814099164859,18.436388650274,17.1997487310207,10.2791972005456,10.2203102395384,9.49384894663097,5.63553554364021,9.22280696565482,15.1688099524112,9.03678557017357,6.77132432971709,30.8717436849872,16.9201813035864,14.1575795200403,30.6083892370903,19.8975996787178,24.2948107803636,11.8746468067218,9.17532825059507,11.9342930149154,14.8006711700578,11.3477044938228,8.71951148593805,8.79370328398601,6.77927793946262,7.60160956467908,22.3997815974346,12.5214396235772,11.7091083353127,5.49263744411049,3.61427309940574,3.77385561915077,4.94245977044578,4.8056605709282,4.50031642751824,1.71007646244749,0.59675003159727,1.46131323011707,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,2.43806866313962,4.02420515822182,2.30152611318355,0.361439152384566,0,1.01392563272577,0,0,26.8478880745953,13.747222642679,21.5195224948159,25.9338569485471,0,0.370784442784429,0.324547393654683,0,0.26591592103773,0.476981248610684,0,0,46.9079281385424,34.409383804245,62.8324307909746,55.965486250477,34.3989537692123,14.3061381808835,10.8677382599141,49.6160177605111,46.605380411959,13.0541038978221,15.3075140501476,4.56163263431108,21.4774610642389,15.4418493745265,17.012980905517,39.2918804449951,32.1077002855423,16.2160531895984,27.596994743859,48.4125486379746,33.8923226271253,1.31780417436063,0,0,0.496971951695318,0.25326102332916,1.19168262731897,3.72887606973458,0.354668382198357,2.80338800071154,0,4.68668341992604,3.11211035399766,5.52313755485721,12.2596427335094,122.599516392394,115.81136082048,5.85803579584492,4.05808099879417,9.69802096625564,8.66802347200446,1.17434498643765,0.971237666208789,0.842704840213491,1.22492502752936,1.47401180774122,2.37649296704261,0,0.989067717114227,22.7540340484507,14.3723628363248,1.0100166837244,0.125118519871964,1.38532057742091,0.438977620880838,0,0.45071417671979,2.60894021268048,0.179389635688862,0.85422955527427,0.211931901159562,0,0.103052529238439,0.515281080091258,0.558350568994769,0.506328996723799,0.194874010322397,1.00973509697646,0.552299391853796,0.484938170456436,0.355009592516614,0.302256294682921,0,0.386521706326594,0.272746120590835,0,0.487894824518382,0.397589304964456,2.5562667431294,1.86589899027667,1.7662459561294,0.72995471815166,3.12899064659632,2.57296375277154,0,2.78620756819187,15.1594691150613,0,0,0,0,0,0,0,0,0,69.3866127347169,16.8290128564135,3.7041661019826,20.5812195939759,0,0,8.86184860022106,0,3.93563003337963,16.4705097886585,0.109750285408626,0,0.100528972411631,0.0925884451585296,0.977424915930974,2.07986957055916,14.4331342025273,32.2286525830714,7.98379120803587,9.81691844775302,16.2044929401814,14.2690614175949,0,0,20.1897944991666,0.702012795417713,3.12125440806329,0,0.503946384596579,0.425325291727159,0.358234090811393,0,0.383382679165211,6.89728533054321,5.81119664487292,5.39053100406007,3.60299883542404,3.02981840223312,0.253991577168676,1.14596527667483,0,0,1.23392991243988,0.901029173531752,0,77.4825792826443,32.2610450936627,41.4361314888368,1.68053230485111,10.7296933755565,4.22651376278,0.531876233169741,1.04007436911366,2.05765899409714,1.41849132023278,1.8649552531127,11.1522835053355,6.51145926469732,2.46972101034231,1.95441710576241,10.3063665135338,0.791951872933429,3.31583314765545,6.10073421020206,2.39935178836937,20.6760427090024,18.0812552915566,8.43335757932127,0,0,0,0.579125226670317,1.43833425785268,0.179060963239896,0,0,0,0.256686072559497,0,0,0,0.335032530668698,0,0,0,0.414415513436035,1.96306386750624,16.5056271949693,7.05289061619313,0,0.178428988797162,0.473107245101804,0.35142424497814,0.902838299183157,9.09630016223939,2.0694614258501,0,0.553107505625109,0.60818530127658,242.989236411261,109.462752195663,0.413536052245775,2.80428461064202,1.06727557803444,0,1.66435439510497,0.604780586659361,0.248107807818777,0,0,0.384417447767103,0.511707249066704,0.160853921143607,0,0.462629081407967,1.42049380250502,1.39616165223476,2.59627214591811,0.116210378459959,2.41718899183244,0,0.276242966807689,1.03333003348146,1.0925470080403,0.917870904715969,5.86559496779635,2.77255213575893,7.84349769176855,7.30696123266303,4.22206515571503,48.9053551504855,32.8280851183675,9.50030030849413,64.7754461299215,20.8628756908767,35.6199739436946,4.58777291481069,2.49322802678617,6.26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| |||
|short_description=p2@TCN2 | |||
}} |
Revision as of 15:19, 21 January 2014
Short description: | p2@TCN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TCN2_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 70bp_to_ENST00000407817_5end |
EntrezGene: | TCN2 |
HGNC: | 11653 |
UniProt: | Q96FD4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.56e-24 | 36 |
defensive cell | 5.90e-21 | 48 |
phagocyte | 5.90e-21 | 48 |
classical monocyte | 2.54e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.54e-19 | 42 |
meso-epithelial cell | 1.61e-18 | 45 |
granulocyte monocyte progenitor cell | 8.38e-18 | 67 |
macrophage dendritic cell progenitor | 7.81e-17 | 61 |
endothelial cell of vascular tree | 9.13e-17 | 24 |
myeloid lineage restricted progenitor cell | 1.58e-16 | 66 |
monopoietic cell | 3.50e-16 | 59 |
monocyte | 3.50e-16 | 59 |
monoblast | 3.50e-16 | 59 |
promonocyte | 3.50e-16 | 59 |
myeloid leukocyte | 3.94e-16 | 72 |
blood vessel endothelial cell | 4.15e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.15e-13 | 18 |
lining cell | 7.26e-12 | 58 |
barrier cell | 7.26e-12 | 58 |
kidney cell | 3.20e-09 | 17 |
kidney epithelial cell | 3.20e-09 | 17 |
epithelial cell of nephron | 6.34e-08 | 15 |
endothelial cell of artery | 1.66e-07 | 9 |
kidney cortical cell | 8.12e-07 | 12 |
renal cortical epithelial cell | 8.12e-07 | 12 |