FFCP PHASE1:Hg19::chr22:38577782..38577858,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8398 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9039 | |||
|TSSclassifier=strong | |||
|UniProt=O60733,E7EN23,F2Z3G2,B0QYE9,F8WEN3,B7Z6K3,A8K460 | |||
|association_with_transcript=0bp_to_ENST00000332509,ENST00000402064,ENST00000419848,ENST00000420435,ENST00000426674,ENST00000430886,ENST00000435484,ENST00000436218,ENST00000447598,ENST00000451461,ENST00000471636,NM_001199562,uc003avb.2,uc011ano.1_5end | |||
|coexpression_cluster_id=C1381 | |||
|description=CAGE_peak_1_at_PLA2G6_5end | |||
|id=chr22:38577782..38577858,- | |||
|ontology_enrichment_celltype=CL:0000838!1.68e-15!52;CL:0000542!3.36e-15!53;CL:0000051!3.36e-15!53;CL:0000084!2.74e-09!25;CL:0000827!2.74e-09!25;CL:0000791!6.32e-09!18;CL:0000789!6.32e-09!18;CL:0002420!6.32e-09!18;CL:0002419!6.32e-09!18;CL:0000790!6.32e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.88e-09;53!CL:0000084;2.11e-09;25!CL:0000791;3.70e-09;18!CL:0000789;3.70e-09;18!CL:0002419;3.70e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.53e-15,52;CL:0000542,3.07e-15,53;CL:0000051,3.07e-15,53;CL:0000084,2.60e-09,25;CL:0000827,2.60e-09,25;CL:0000791,6.02e-09,18;CL:0000789,6.02e-09,18;CL:0002420,6.02e-09,18;CL:0002419,6.02e-09,18;CL:0000790,6.02e-09,18 | |||
|ontology_enrichment_development_v019=CL:0000051;1.88e-09;53!CL:0000790;3.70e-09;18!UBERON:0006601;5.00e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.45e-38!115;UBERON:0001049!4.61e-27!57;UBERON:0005068!4.61e-27!57;UBERON:0006241!4.61e-27!57;UBERON:0007135!4.61e-27!57;UBERON:0002616!1.43e-23!59;UBERON:0001017!7.27e-23!82;UBERON:0000955!1.51e-22!69;UBERON:0006238!1.51e-22!69;UBERON:0005743!4.43e-22!86;UBERON:0003080!3.76e-21!42;UBERON:0000073!4.26e-21!94;UBERON:0001016!4.26e-21!94;UBERON:0002780!4.80e-21!41;UBERON:0001890!4.80e-21!41;UBERON:0006240!4.80e-21!41;UBERON:0002346!1.57e-20!90;UBERON:0003075!3.17e-19!86;UBERON:0007284!3.17e-19!86;UBERON:0001893!1.45e-17!34;UBERON:0002020!2.49e-17!34;UBERON:0003528!2.49e-17!34;UBERON:0002791!5.99e-17!33;UBERON:0001869!2.97e-16!32;UBERON:0003056!1.25e-15!61;UBERON:0002619!4.44e-13!22;UBERON:0000153!8.41e-13!129;UBERON:0007811!8.41e-13!129;UBERON:0000924!8.88e-13!173;UBERON:0006601!8.88e-13!173;UBERON:0000956!1.61e-12!25;UBERON:0000203!1.61e-12!25;UBERON:0001950!5.58e-12!20;UBERON:0004121!8.72e-12!169;UBERON:0000033!5.07e-11!123;UBERON:0003076!4.09e-07!15;UBERON:0003057!4.09e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.74e-15;41!UBERON:0001890;1.74e-15;41!UBERON:0001893;4.23e-15;34!UBERON:0000073;4.84e-15;53!UBERON:0002616;4.84e-15;53!UBERON:0003528;8.24e-15;34!UBERON:0002020;8.24e-15;34!UBERON:0002791;9.95e-15;32!UBERON:0001869;1.06e-14;32!UBERON:0002619;3.03e-13;22!UBERON:0000956;1.44e-12;25!UBERON:0000203;1.44e-12;25!UBERON:0001950;3.79e-12;20!UBERON:0007023;6.91e-11;114!UBERON:0001017;2.55e-10;75!UBERON:0000955;4.32e-10;68!UBERON:0001016;6.65e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.07e-37,114;UBERON:0001049,5.17e-27,56;UBERON:0005068,5.17e-27,56;UBERON:0006241,5.17e-27,56;UBERON:0007135,5.17e-27,56;UBERON:0000073,1.57e-25,53;UBERON:0002616,1.57e-25,53;UBERON:0001017,1.62e-22,81;UBERON:0000955,2.62e-22,68;UBERON:0006238,2.62e-22,68;UBERON:0002346,1.46e-21,86;UBERON:0001016,2.04e-21,89;UBERON:0002780,4.21e-21,41;UBERON:0001890,4.21e-21,41;UBERON:0003080,4.21e-21,41;UBERON:0006240,4.21e-21,41;UBERON:0003075,3.09e-20,82;UBERON:0007284,3.09e-20,82;UBERON:0001893,1.30e-17,34;UBERON:0003528,2.24e-17,34;UBERON:0002020,2.24e-17,34;UBERON:0010371,2.07e-16,104;UBERON:0002791,2.57e-16,32;UBERON:0001869,2.69e-16,32;UBERON:0003056,7.31e-16,61;UBERON:0002619,4.11e-13,22;UBERON:0004121,4.91e-13,171;UBERON:0000924,4.91e-13,171;UBERON:0006601,4.91e-13,171;UBERON:0000956,1.50e-12,25;UBERON:0000203,1.50e-12,25;UBERON:0001950,5.20e-12,20;UBERON:0010314,9.14e-09,132;UBERON:0003076,3.93e-07,15;UBERON:0003057,3.93e-07,15 | |||
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| |||
|short_description=p1@PLA2G6 | |||
}} |
Revision as of 15:56, 21 January 2014
Short description: | p1@PLA2G6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLA2G6_5end |
Coexpression cluster: | C1381_corpus_thyroid_cerebellum_pineal_thalamus_pituitary_substantia |
Association with transcript: | 0bp_to_ENST00000332509, ENST00000402064, ENST00000419848, ENST00000420435, ENST00000426674, ENST00000430886, ENST00000435484, ENST00000436218, ENST00000447598, ENST00000451461, ENST00000471636, NM_001199562, uc003avb.2, uc011ano.1_5end |
EntrezGene: | PLA2G6 |
HGNC: | 9039 |
UniProt: | O60733E7EN23F2Z3G2B0QYE9F8WEN3B7Z6K3A8K460 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.53e-15 | 52 |
lymphocyte | 3.07e-15 | 53 |
common lymphoid progenitor | 3.07e-15 | 53 |
T cell | 2.60e-09 | 25 |
pro-T cell | 2.60e-09 | 25 |
mature alpha-beta T cell | 6.02e-09 | 18 |
alpha-beta T cell | 6.02e-09 | 18 |
immature T cell | 6.02e-09 | 18 |
mature T cell | 6.02e-09 | 18 |
immature alpha-beta T cell | 6.02e-09 | 18 |